RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 MYOM2P54296 1465 aa22.39■■□□□ 1.17
SS18L1-202ENST00000370848 DDX17Q92841 729 aaKnown RBP22.38■■□□□ 1.17
SS18L1-202ENST00000370848 PXDNQ92626 1479 aa22.38■■□□□ 1.17
SS18L1-202ENST00000370848 AFF2P51816 1311 aa22.37■■□□□ 1.17
SS18L1-202ENST00000370848 HRCP23327 699 aa22.37■■□□□ 1.17
SS18L1-202ENST00000370848 ORAI2Q96SN7 254 aa22.37■■□□□ 1.17
SS18L1-202ENST00000370848 FMN2Q9NZ56 1722 aa22.36■■□□□ 1.17
SS18L1-202ENST00000370848 NUTM2BA6NNL0 878 aaPredicted RBP22.34■■□□□ 1.17
SS18L1-202ENST00000370848 NUTM2EB1AL46 878 aaPredicted RBP22.34■■□□□ 1.17
SS18L1-202ENST00000370848 RXRBP28702 533 aa22.34■■□□□ 1.17
SS18L1-202ENST00000370848 NUTM2AQ8IVF1 878 aaPredicted RBP22.34■■□□□ 1.17
SS18L1-202ENST00000370848 SIRT1Q96EB6 747 aa22.34■■□□□ 1.17
SS18L1-202ENST00000370848 YTHDC2Q9H6S0 1430 aaKnown RBP22.33■■□□□ 1.17
SS18L1-202ENST00000370848 KIF1AQ12756 1690 aa22.32■■□□□ 1.16
SS18L1-202ENST00000370848 NPHP3Q7Z494 1330 aa22.31■■□□□ 1.16
SS18L1-202ENST00000370848 MARF1Q9Y4F3 1742 aaKnown RBP22.31■■□□□ 1.16
SS18L1-202ENST00000370848 UPF1Q92900 1129 aaKnown RBP eCLIP22.3■■□□□ 1.16
SS18L1-202ENST00000370848 RGS12O14924 1447 aa22.3■■□□□ 1.16
SS18L1-202ENST00000370848 TRIM26Q12899 539 aaPredicted RBP22.29■■□□□ 1.16
SS18L1-202ENST00000370848 RGL3Q3MIN7 710 aa22.29■■□□□ 1.16
SS18L1-202ENST00000370848 PLEKHH1Q9ULM0 1364 aa22.28■■□□□ 1.16
SS18L1-202ENST00000370848 DLC1Q96QB1 1528 aa22.28■■□□□ 1.16
SS18L1-202ENST00000370848 C14orf93Q9H972 538 aaKnown RBP22.28■■□□□ 1.16
SS18L1-202ENST00000370848 RBM6P78332 1123 aaKnown RBP22.27■■□□□ 1.16
SS18L1-202ENST00000370848 FNBP4Q8N3X1 1017 aaPredicted RBP22.27■■□□□ 1.16
SS18L1-202ENST00000370848 C8orf37Q96NL8 207 aa22.27■■□□□ 1.16
SS18L1-202ENST00000370848 WAPLQ7Z5K2 1190 aa22.25■■□□□ 1.15
SS18L1-202ENST00000370848 ADGRB1O14514 1584 aa22.25■■□□□ 1.15
SS18L1-202ENST00000370848 ADGRB2O60241 1585 aa22.25■■□□□ 1.15
SS18L1-202ENST00000370848 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.24■■□□□ 1.15
SS18L1-202ENST00000370848 ATRNO75882 1429 aa22.23■■□□□ 1.15
SS18L1-202ENST00000370848 ESCO1Q5FWF5 840 aa22.23■■□□□ 1.15
SS18L1-202ENST00000370848 TMEM132EQ6IEE7 984 aa22.23■■□□□ 1.15
SS18L1-202ENST00000370848 QTRT2Q9H974 415 aaKnown RBP22.23■■□□□ 1.15
SS18L1-202ENST00000370848 STK26Q9P289 416 aa22.21■■□□□ 1.15
SS18L1-202ENST00000370848 NGLY1Q96IV0 654 aa22.2■■□□□ 1.14
SS18L1-202ENST00000370848 DHX57Q6P158 1386 aaKnown RBP22.2■■□□□ 1.14
SS18L1-202ENST00000370848 BCL9LQ86UU0 1499 aa22.2■■□□□ 1.14
SS18L1-202ENST00000370848 FOXO3O43524 673 aa22.19■■□□□ 1.14
SS18L1-202ENST00000370848 ADAMTS2O95450 1211 aa22.19■■□□□ 1.14
SS18L1-202ENST00000370848 RGPD8O14715 1765 aaPredicted RBP22.17■■□□□ 1.14
SS18L1-202ENST00000370848 USP32Q8NFA0 1604 aa22.17■■□□□ 1.14
SS18L1-202ENST00000370848 ANKARQ7Z5J8 1434 aa22.17■■□□□ 1.14
SS18L1-202ENST00000370848 EP400Q96L91 3159 aa22.17■■□□□ 1.14
SS18L1-202ENST00000370848 SPATA31A3Q5VYP0 1347 aa22.17■■□□□ 1.14
SS18L1-202ENST00000370848 USP21Q9UK80 565 aa22.17■■□□□ 1.14
SS18L1-202ENST00000370848 TRPC5Q9UL62 973 aaPredicted RBP22.17■■□□□ 1.14
SS18L1-202ENST00000370848 CFAP70Q5T0N1 1121 aa22.16■■□□□ 1.14
SS18L1-202ENST00000370848 SLIT2O94813 1529 aa22.16■■□□□ 1.14
SS18L1-202ENST00000370848 STAC3Q96MF2 364 aa22.15■■□□□ 1.14
SS18L1-202ENST00000370848 ABCA3Q99758 1704 aa22.14■■□□□ 1.13
SS18L1-202ENST00000370848 TNS3Q68CZ2 1445 aa22.13■■□□□ 1.13
SS18L1-202ENST00000370848 SBNO1A3KN83 1393 aa22.12■■□□□ 1.13
SS18L1-202ENST00000370848 ATAD2Q6PL18 1390 aa22.11■■□□□ 1.13
SS18L1-202ENST00000370848 XPCQ01831 940 aaPredicted RBP22.1■■□□□ 1.13
SS18L1-202ENST00000370848 TRPM3Q9HCF6 1732 aaPredicted RBP22.09■■□□□ 1.13
SS18L1-202ENST00000370848 NWD2Q9ULI1 1742 aa22.09■■□□□ 1.13
SS18L1-202ENST00000370848 NUTM2FA1L443 756 aa22.09■■□□□ 1.13
SS18L1-202ENST00000370848 PRAM1Q96QH2 718 aa22.09■■□□□ 1.13
SS18L1-202ENST00000370848 PHF8Q9UPP1 1060 aa22.09■■□□□ 1.13
SS18L1-202ENST00000370848 GLI3P10071 1580 aa22.08■■□□□ 1.13
SS18L1-202ENST00000370848 TULP4Q9NRJ4 1543 aa22.07■■□□□ 1.12
SS18L1-202ENST00000370848 KRT28Q7Z3Y7 464 aa22.07■■□□□ 1.12
SS18L1-202ENST00000370848 ALS2Q96Q42 1657 aa22.06■■□□□ 1.12
SS18L1-202ENST00000370848 ARHGEF28Q8N1W1 1705 aaKnown RBP22.06■■□□□ 1.12
SS18L1-202ENST00000370848 PLCH1Q4KWH8 1693 aa22.05■■□□□ 1.12
SS18L1-202ENST00000370848 ARHGEF10O15013 1369 aa22.05■■□□□ 1.12
SS18L1-202ENST00000370848 EIF3AQ14152 1382 aaKnown RBP22.05■■□□□ 1.12
SS18L1-202ENST00000370848 GJD4Q96KN9 370 aaPredicted RBP22.04■■□□□ 1.12
SS18L1-202ENST00000370848 KDM2AQ9Y2K7 1162 aa22.04■■□□□ 1.12
SS18L1-202ENST00000370848 RALGAPBQ86X10 1494 aa22.03■■□□□ 1.12
SS18L1-202ENST00000370848 KIAA1210Q9ULL0 1709 aa22.03■■□□□ 1.12
SS18L1-202ENST00000370848 PSME1Q06323 249 aa22.03■■□□□ 1.12
SS18L1-202ENST00000370848 DCAF11Q8TEB1 546 aa22.03■■□□□ 1.12
SS18L1-202ENST00000370848 SIN3AQ96ST3 1273 aa22.03■■□□□ 1.12
SS18L1-202ENST00000370848 CRYBG1Q9Y4K1 1723 aa22.03■■□□□ 1.12
SS18L1-202ENST00000370848 UNC5CLQ8IV45 518 aa22.02■■□□□ 1.12
SS18L1-202ENST00000370848 PCGF6Q9BYE7 350 aa22.02■■□□□ 1.12
SS18L1-202ENST00000370848 POGKQ9P215 609 aa21.99■■□□□ 1.11
SS18L1-202ENST00000370848 ITSN1Q15811 1721 aa21.99■■□□□ 1.11
SS18L1-202ENST00000370848 NRAPQ86VF7 1730 aa21.99■■□□□ 1.11
SS18L1-202ENST00000370848 PRR36Q9H6K5 1346 aa21.99■■□□□ 1.11
SS18L1-202ENST00000370848 SRCAPQ6ZRS2 3230 aa21.98■■□□□ 1.11
SS18L1-202ENST00000370848 ATP7BP35670 1465 aa21.97■■□□□ 1.11
SS18L1-202ENST00000370848 CCDC125Q86Z20 511 aa21.97■■□□□ 1.11
SS18L1-202ENST00000370848 NEUROD1Q13562 356 aa21.96■■□□□ 1.11
SS18L1-202ENST00000370848 SAFB2Q14151 953 aaKnown RBP eCLIP21.96■■□□□ 1.11
SS18L1-202ENST00000370848 TRAK1Q9UPV9 953 aa21.96■■□□□ 1.11
SS18L1-202ENST00000370848 TOPAZ1Q8N9V7 1692 aa21.95■■□□□ 1.1
SS18L1-202ENST00000370848 BRWD3Q6RI45 1802 aa21.95■■□□□ 1.1
SS18L1-202ENST00000370848 WASLO00401 505 aaPredicted RBP21.95■■□□□ 1.1
SS18L1-202ENST00000370848 ONECUT3O60422 494 aaPredicted RBP21.95■■□□□ 1.1
SS18L1-202ENST00000370848 VPS72Q15906 364 aa21.95■■□□□ 1.1
SS18L1-202ENST00000370848 COL14A1Q05707 1796 aaKnown RBP21.94■■□□□ 1.1
SS18L1-202ENST00000370848 GPRASP1Q5JY77 1395 aa21.91■■□□□ 1.1
SS18L1-202ENST00000370848 PMFBP1Q8TBY8 1022 aa21.91■■□□□ 1.1
SS18L1-202ENST00000370848 CABLES1Q8TDN4 633 aa21.91■■□□□ 1.1
SS18L1-202ENST00000370848 MINK1Q8N4C8 1332 aaPredicted RBP21.9■■□□□ 1.1
SS18L1-202ENST00000370848 L3MBTL2Q969R5 705 aa21.9■■□□□ 1.1
SS18L1-202ENST00000370848 BLMP54132 1417 aaPredicted RBP21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms