RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 EXOSC9Q06265 439 aaKnown RBP20.74■□□□□ 0.91
PTP4A1-201ENST00000370651 CCDC73Q6ZRK6 1079 aa20.74■□□□□ 0.91
PTP4A1-201ENST00000370651 LRRFIP1Q32MZ4 808 aaKnown RBP20.74■□□□□ 0.91
PTP4A1-201ENST00000370651 CFTRP13569 1480 aa20.74■□□□□ 0.91
PTP4A1-201ENST00000370651 RAD54L2Q9Y4B4 1467 aa20.74■□□□□ 0.91
PTP4A1-201ENST00000370651 HSP90AB4PQ58FF6 505 aa20.74■□□□□ 0.91
PTP4A1-201ENST00000370651 CPLX1O14810 134 aa20.73■□□□□ 0.91
PTP4A1-201ENST00000370651 SETQ01105 290 aaPredicted RBP20.73■□□□□ 0.91
PTP4A1-201ENST00000370651 NINLQ9Y2I6 1382 aa20.73■□□□□ 0.91
PTP4A1-201ENST00000370651 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.73■□□□□ 0.91
PTP4A1-201ENST00000370651 NBPF1Q3BBV0 1214 aa20.73■□□□□ 0.91
PTP4A1-201ENST00000370651 NEK4P51957 841 aa20.73■□□□□ 0.91
PTP4A1-201ENST00000370651 C1orf141Q5JVX7 400 aa20.73■□□□□ 0.91
PTP4A1-201ENST00000370651 MCM4P33991 863 aa20.72■□□□□ 0.91
PTP4A1-201ENST00000370651 ERC2O15083 957 aa20.72■□□□□ 0.91
PTP4A1-201ENST00000370651 CCDC70Q6NSX1 233 aa20.72■□□□□ 0.91
PTP4A1-201ENST00000370651 TSPY26PQ9H489 355 aa20.72■□□□□ 0.91
PTP4A1-201ENST00000370651 ARGLU1Q9NWB6 273 aaPredicted RBP20.72■□□□□ 0.91
PTP4A1-201ENST00000370651 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.72■□□□□ 0.91
PTP4A1-201ENST00000370651 MCM2P49736 904 aa20.72■□□□□ 0.91
PTP4A1-201ENST00000370651 HMGN5P82970 282 aaKnown RBP20.72■□□□□ 0.91
PTP4A1-201ENST00000370651 AKAP17AQ02040 695 aaKnown RBP20.72■□□□□ 0.91
PTP4A1-201ENST00000370651 GCC1Q96CN9 775 aa20.72■□□□□ 0.91
PTP4A1-201ENST00000370651 SYNE3Q6ZMZ3 975 aa20.71■□□□□ 0.91
PTP4A1-201ENST00000370651 LETM1O95202 739 aaPredicted RBP20.71■□□□□ 0.91
PTP4A1-201ENST00000370651 G3BP1Q13283 466 aaKnown RBP eCLIP20.71■□□□□ 0.91
PTP4A1-201ENST00000370651 TRIM29Q14134 588 aa20.71■□□□□ 0.91
PTP4A1-201ENST00000370651 TSPYL4Q9UJ04 414 aa20.71■□□□□ 0.91
PTP4A1-201ENST00000370651 MNS1Q8NEH6 495 aa20.71■□□□□ 0.91
PTP4A1-201ENST00000370651 RBM10P98175 930 aaKnown RBP20.7■□□□□ 0.9
PTP4A1-201ENST00000370651 ESPNB1AK53 854 aa20.69■□□□□ 0.9
PTP4A1-201ENST00000370651 KIAA1107Q9UPP5 1409 aa20.69■□□□□ 0.9
PTP4A1-201ENST00000370651 IPO7O95373 1038 aaKnown RBP20.68■□□□□ 0.9
PTP4A1-201ENST00000370651 PKNOX2Q96KN3 472 aa20.68■□□□□ 0.9
PTP4A1-201ENST00000370651 FBXW7Q969H0 707 aa20.68■□□□□ 0.9
PTP4A1-201ENST00000370651 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
PTP4A1-201ENST00000370651 K7ELQ4 463 aaPredicted RBP20.67■□□□□ 0.9
PTP4A1-201ENST00000370651 HOOK1Q9UJC3 728 aaKnown RBP20.67■□□□□ 0.9
PTP4A1-201ENST00000370651 CWC22Q9HCG8 908 aaKnown RBP20.67■□□□□ 0.9
PTP4A1-201ENST00000370651 PRXQ9BXM0 1461 aa20.66■□□□□ 0.9
PTP4A1-201ENST00000370651 TRIM5Q9C035 493 aa20.66■□□□□ 0.9
PTP4A1-201ENST00000370651 CABP2Q9NPB3 220 aa20.66■□□□□ 0.9
PTP4A1-201ENST00000370651 CIZ1Q9ULV3 898 aaPredicted RBP20.66■□□□□ 0.9
PTP4A1-201ENST00000370651 ANKRD20A12PQ8NF67 263 aa20.66■□□□□ 0.9
PTP4A1-201ENST00000370651 NOB1Q9ULX3 412 aaKnown RBP20.66■□□□□ 0.9
PTP4A1-201ENST00000370651 DDX58O95786 925 aaKnown RBP20.66■□□□□ 0.9
PTP4A1-201ENST00000370651 TSR2Q969E8 191 aaKnown RBP20.65■□□□□ 0.9
PTP4A1-201ENST00000370651 CFAP70Q5T0N1 1121 aa20.65■□□□□ 0.9
PTP4A1-201ENST00000370651 C1orf115Q9H7X2 142 aa20.65■□□□□ 0.9
PTP4A1-201ENST00000370651 UBTFL1P0CB47 393 aaPredicted RBP20.65■□□□□ 0.9
PTP4A1-201ENST00000370651 MVPQ14764 893 aaKnown RBP20.65■□□□□ 0.9
PTP4A1-201ENST00000370651 CCDC27Q2M243 656 aa20.65■□□□□ 0.9
PTP4A1-201ENST00000370651 MARCH6O60337 910 aa20.64■□□□□ 0.89
PTP4A1-201ENST00000370651 NAT10Q9H0A0 1025 aaKnown RBP20.64■□□□□ 0.89
PTP4A1-201ENST00000370651 SCAPERQ9BY12 1400 aa20.64■□□□□ 0.89
PTP4A1-201ENST00000370651 TIAM1Q13009 1591 aa20.64■□□□□ 0.89
PTP4A1-201ENST00000370651 WDR63Q8IWG1 891 aa20.64■□□□□ 0.89
PTP4A1-201ENST00000370651 TRDNQ13061 729 aa20.63■□□□□ 0.89
PTP4A1-201ENST00000370651 TMEM132EQ6IEE7 984 aa20.63■□□□□ 0.89
PTP4A1-201ENST00000370651 GNAI3P08754 354 aa20.63■□□□□ 0.89
PTP4A1-201ENST00000370651 CT47B1P0C2W7 299 aaPredicted RBP20.63■□□□□ 0.89
PTP4A1-201ENST00000370651 CEP89Q96ST8 783 aa20.63■□□□□ 0.89
PTP4A1-201ENST00000370651 RRP9O43818 475 aaKnown RBP20.63■□□□□ 0.89
PTP4A1-201ENST00000370651 FOSBP53539 338 aa20.63■□□□□ 0.89
PTP4A1-201ENST00000370651 PDE4CQ08493 712 aa20.63■□□□□ 0.89
PTP4A1-201ENST00000370651 SDF4Q9BRK5 362 aa20.62■□□□□ 0.89
PTP4A1-201ENST00000370651 BCL11BQ9C0K0 894 aaPredicted RBP20.62■□□□□ 0.89
PTP4A1-201ENST00000370651 CNTROBQ8N137 903 aa20.62■□□□□ 0.89
PTP4A1-201ENST00000370651 PSMA5P28066 241 aa20.62■□□□□ 0.89
PTP4A1-201ENST00000370651 ATF7IPQ6VMQ6 1270 aa20.62■□□□□ 0.89
PTP4A1-201ENST00000370651 FIBPO43427 364 aa20.62■□□□□ 0.89
PTP4A1-201ENST00000370651 PRKAR2BP31323 418 aa20.61■□□□□ 0.89
PTP4A1-201ENST00000370651 TWISTNBQ3B726 338 aaPredicted RBP20.61■□□□□ 0.89
PTP4A1-201ENST00000370651 APPP05067 770 aa20.6■□□□□ 0.89
PTP4A1-201ENST00000370651 PDCP20941 246 aa20.6■□□□□ 0.89
PTP4A1-201ENST00000370651 TTC5Q8N0Z6 440 aa20.6■□□□□ 0.89
PTP4A1-201ENST00000370651 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.59■□□□□ 0.892e-8■□□□□ 9.2
PTP4A1-201ENST00000370651 PCMTD1Q96MG8 357 aaPredicted RBP20.59■□□□□ 0.89
PTP4A1-201ENST00000370651 SLFN5Q08AF3 891 aa20.59■□□□□ 0.89
PTP4A1-201ENST00000370651 SURF6O75683 361 aaKnown RBP20.58■□□□□ 0.89
PTP4A1-201ENST00000370651 CHD1LQ86WJ1 897 aa20.58■□□□□ 0.89
PTP4A1-201ENST00000370651 ACBD3Q9H3P7 528 aa20.58■□□□□ 0.89
PTP4A1-201ENST00000370651 HSP90B2PQ58FF3 399 aa20.58■□□□□ 0.89
PTP4A1-201ENST00000370651 CLASRPQ8N2M8 674 aaKnown RBP20.58■□□□□ 0.89
PTP4A1-201ENST00000370651 EHBP1L1Q8N3D4 1523 aa20.58■□□□□ 0.89
PTP4A1-201ENST00000370651 PRDM2Q13029 1718 aa20.57■□□□□ 0.88
PTP4A1-201ENST00000370651 CCDC66A2RUB6 948 aa20.57■□□□□ 0.88
PTP4A1-201ENST00000370651 ERBINQ96RT1 1412 aa20.57■□□□□ 0.88
PTP4A1-201ENST00000370651 EFCAB5A4FU69 1503 aa20.57■□□□□ 0.88
PTP4A1-201ENST00000370651 CCDC47Q96A33 483 aaKnown RBP20.56■□□□□ 0.88
PTP4A1-201ENST00000370651 UQCRHLA0A096LP55 91 aa20.56■□□□□ 0.88
PTP4A1-201ENST00000370651 KINO60870 393 aaKnown RBP20.56■□□□□ 0.88
PTP4A1-201ENST00000370651 UQCRHP07919 91 aa20.56■□□□□ 0.88
PTP4A1-201ENST00000370651 WDR33Q9C0J8 1336 aaKnown RBP20.55■□□□□ 0.88
PTP4A1-201ENST00000370651 NFXL1Q6ZNB6 911 aa20.55■□□□□ 0.88
PTP4A1-201ENST00000370651 SPC24Q8NBT2 197 aa20.55■□□□□ 0.88
PTP4A1-201ENST00000370651 SLC12A5Q9H2X9 1139 aa20.55■□□□□ 0.88
PTP4A1-201ENST00000370651 GTF2E1P29083 439 aaPredicted RBP20.55■□□□□ 0.88
PTP4A1-201ENST00000370651 NAIPQ13075 1403 aa20.55■□□□□ 0.88
PTP4A1-201ENST00000370651 C11orf95C9JLR9 678 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms