RNA–Protein interactions for RNA: ENST00000370275.8

ARFGAP1-202, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARFGAP1, Length 3,467 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-202ENST00000370275 INO80Q9ULG1 1556 aaPredicted RBP18.69■□□□□ 0.58
ARFGAP1-202ENST00000370275 RUNDC1Q96C34 613 aa18.69■□□□□ 0.58
ARFGAP1-202ENST00000370275 SLKQ9H2G2 1235 aaPredicted RBP18.69■□□□□ 0.58
ARFGAP1-202ENST00000370275 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
ARFGAP1-202ENST00000370275 POLR3AO14802 1390 aaPredicted RBP18.68■□□□□ 0.58
ARFGAP1-202ENST00000370275 KIF1BO60333 1816 aa18.68■□□□□ 0.58
ARFGAP1-202ENST00000370275 MYOM2P54296 1465 aa18.67■□□□□ 0.58
ARFGAP1-202ENST00000370275 U2AF1L5P0DN76 240 aaPredicted RBP18.66■□□□□ 0.58
ARFGAP1-202ENST00000370275 U2AF1Q01081 240 aaKnown RBP eCLIP18.66■□□□□ 0.588e-11■■□□□ 11.7
ARFGAP1-202ENST00000370275 KIAA1210Q9ULL0 1709 aa18.66■□□□□ 0.58
ARFGAP1-202ENST00000370275 PPRC1Q5VV67 1664 aaKnown RBP18.65■□□□□ 0.58
ARFGAP1-202ENST00000370275 CABP2Q9NPB3 220 aa18.65■□□□□ 0.58
ARFGAP1-202ENST00000370275 TSR2Q969E8 191 aaKnown RBP18.65■□□□□ 0.58
ARFGAP1-202ENST00000370275 EFCAB6Q5THR3 1501 aa18.64■□□□□ 0.57
ARFGAP1-202ENST00000370275 STK26Q9P289 416 aa18.64■□□□□ 0.57
ARFGAP1-202ENST00000370275 SPRYD3Q8NCJ5 442 aa18.63■□□□□ 0.57
ARFGAP1-202ENST00000370275 PDZRN3Q9UPQ7 1066 aa18.63■□□□□ 0.57
ARFGAP1-202ENST00000370275 C14orf93Q9H972 538 aaKnown RBP18.63■□□□□ 0.57
ARFGAP1-202ENST00000370275 SHPRHQ149N8 1683 aa18.63■□□□□ 0.57
ARFGAP1-202ENST00000370275 ABCA9Q8IUA7 1624 aa18.62■□□□□ 0.57
ARFGAP1-202ENST00000370275 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
ARFGAP1-202ENST00000370275 U2SURPO15042 1029 aaKnown RBP18.61■□□□□ 0.57
ARFGAP1-202ENST00000370275 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.61■□□□□ 0.57
ARFGAP1-202ENST00000370275 ARAP3Q8WWN8 1544 aa18.6■□□□□ 0.57
ARFGAP1-202ENST00000370275 MAPK8IP3Q9UPT6 1336 aa18.6■□□□□ 0.57
ARFGAP1-202ENST00000370275 CFAP53Q96M91 514 aa18.6■□□□□ 0.57
ARFGAP1-202ENST00000370275 ASXL2Q76L83 1435 aa18.6■□□□□ 0.57
ARFGAP1-202ENST00000370275 IFT172Q9UG01 1749 aa18.6■□□□□ 0.57
ARFGAP1-202ENST00000370275 NPATQ14207 1427 aa18.59■□□□□ 0.57
ARFGAP1-202ENST00000370275 KIDINS220Q9ULH0 1771 aa18.59■□□□□ 0.57
ARFGAP1-202ENST00000370275 NGEFQ8N5V2 710 aa18.59■□□□□ 0.57
ARFGAP1-202ENST00000370275 GGNBP2Q9H3C7 697 aa18.59■□□□□ 0.57
ARFGAP1-202ENST00000370275 QRICH2Q9H0J4 1663 aa18.58■□□□□ 0.57
ARFGAP1-202ENST00000370275 SBNO2Q9Y2G9 1366 aa18.58■□□□□ 0.56
ARFGAP1-202ENST00000370275 ARXQ96QS3 562 aa18.57■□□□□ 0.56
ARFGAP1-202ENST00000370275 POGKQ9P215 609 aa18.57■□□□□ 0.56
ARFGAP1-202ENST00000370275 NRXN1Q9ULB1 1477 aa18.57■□□□□ 0.56
ARFGAP1-202ENST00000370275 PMFBP1Q8TBY8 1022 aa18.57■□□□□ 0.56
ARFGAP1-202ENST00000370275 WDR63Q8IWG1 891 aa18.56■□□□□ 0.56
ARFGAP1-202ENST00000370275 PHF23Q9BUL5 403 aaPredicted RBP18.56■□□□□ 0.56
ARFGAP1-202ENST00000370275 IQSEC2Q5JU85 1478 aa18.56■□□□□ 0.56
ARFGAP1-202ENST00000370275 FTSJ3Q8IY81 847 aaKnown RBP18.56■□□□□ 0.56
ARFGAP1-202ENST00000370275 ADGRB3O60242 1522 aa18.56■□□□□ 0.56
ARFGAP1-202ENST00000370275 ZNF518AQ6AHZ1 1483 aa18.55■□□□□ 0.56
ARFGAP1-202ENST00000370275 EXOSC9Q06265 439 aaKnown RBP18.55■□□□□ 0.56
ARFGAP1-202ENST00000370275 SRPK2P78362 688 aaKnown RBP18.54■□□□□ 0.56
ARFGAP1-202ENST00000370275 MYO3AQ8NEV4 1616 aa18.54■□□□□ 0.56
ARFGAP1-202ENST00000370275 NINLQ9Y2I6 1382 aa18.54■□□□□ 0.56
ARFGAP1-202ENST00000370275 SMC4Q9NTJ3 1288 aa18.54■□□□□ 0.56
ARFGAP1-202ENST00000370275 RAPGEF3O95398 923 aa18.54■□□□□ 0.56
ARFGAP1-202ENST00000370275 ADGRB1O14514 1584 aa18.53■□□□□ 0.56
ARFGAP1-202ENST00000370275 MYH16Q9H6N6 1097 aa18.53■□□□□ 0.56
ARFGAP1-202ENST00000370275 EVC2Q86UK5 1308 aa18.53■□□□□ 0.56
ARFGAP1-202ENST00000370275 NLRP1Q9C000 1473 aa18.53■□□□□ 0.56
ARFGAP1-202ENST00000370275 BECN1Q14457 450 aa18.52■□□□□ 0.56
ARFGAP1-202ENST00000370275 MVPQ14764 893 aaKnown RBP18.52■□□□□ 0.56
ARFGAP1-202ENST00000370275 RWDD1Q9H446 243 aaPredicted RBP18.52■□□□□ 0.56
ARFGAP1-202ENST00000370275 VIRMAQ69YN4 1812 aaKnown RBP18.52■□□□□ 0.55
ARFGAP1-202ENST00000370275 MINK1Q8N4C8 1332 aaPredicted RBP18.51■□□□□ 0.55
ARFGAP1-202ENST00000370275 ITPRIPQ8IWB1 547 aa18.51■□□□□ 0.55
ARFGAP1-202ENST00000370275 FBLN1P23142 703 aa18.51■□□□□ 0.55
ARFGAP1-202ENST00000370275 ZKSCAN2Q63HK3 967 aa18.51■□□□□ 0.55
ARFGAP1-202ENST00000370275 DZIP1LQ8IYY4 767 aaKnown RBP18.51■□□□□ 0.55
ARFGAP1-202ENST00000370275 NEURL4Q96JN8 1562 aa18.51■□□□□ 0.55
ARFGAP1-202ENST00000370275 UPF2Q9HAU5 1272 aaKnown RBP18.51■□□□□ 0.55
ARFGAP1-202ENST00000370275 TBC1D2Q9BYX2 928 aa18.5■□□□□ 0.55
ARFGAP1-202ENST00000370275 MFAP1P55081 439 aaKnown RBP18.5■□□□□ 0.55
ARFGAP1-202ENST00000370275 PPLO60437 1756 aa18.5■□□□□ 0.55
ARFGAP1-202ENST00000370275 SSH1Q8WYL5 1049 aa18.5■□□□□ 0.55
ARFGAP1-202ENST00000370275 TBC1D32Q96NH3 1257 aa18.49■□□□□ 0.55
ARFGAP1-202ENST00000370275 ZC3H13Q5T200 1668 aaKnown RBP18.49■□□□□ 0.55
ARFGAP1-202ENST00000370275 SETBP1Q9Y6X0 1596 aa18.49■□□□□ 0.55
ARFGAP1-202ENST00000370275 TRIM27P14373 513 aa18.49■□□□□ 0.55
ARFGAP1-202ENST00000370275 TULP4Q9NRJ4 1543 aa18.49■□□□□ 0.55
ARFGAP1-202ENST00000370275 ANKRD36BQ8N2N9 1353 aa18.48■□□□□ 0.55
ARFGAP1-202ENST00000370275 A0A1W2PP64 1363 aa18.47■□□□□ 0.55
ARFGAP1-202ENST00000370275 TMPOP42166 694 aaKnown RBP18.47■□□□□ 0.55
ARFGAP1-202ENST00000370275 CCDC27Q2M243 656 aa18.47■□□□□ 0.55
ARFGAP1-202ENST00000370275 NPM1P06748 294 aaKnown RBP eCLIP18.47■□□□□ 0.55
ARFGAP1-202ENST00000370275 TRIM35Q9UPQ4 493 aa18.47■□□□□ 0.55
ARFGAP1-202ENST00000370275 NOB1Q9ULX3 412 aaKnown RBP18.47■□□□□ 0.55
ARFGAP1-202ENST00000370275 IDI1Q13907 227 aa18.46■□□□□ 0.55
ARFGAP1-202ENST00000370275 GLI2P10070 1586 aa18.46■□□□□ 0.55
ARFGAP1-202ENST00000370275 FRMPD1Q5SYB0 1578 aa18.46■□□□□ 0.55
ARFGAP1-202ENST00000370275 CD109Q6YHK3 1445 aa18.46■□□□□ 0.55
ARFGAP1-202ENST00000370275 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.54
ARFGAP1-202ENST00000370275 LMTK2Q8IWU2 1503 aa18.45■□□□□ 0.54
ARFGAP1-202ENST00000370275 ANTXR1Q9H6X2 564 aa18.45■□□□□ 0.54
ARFGAP1-202ENST00000370275 RIPK4P57078 832 aa18.44■□□□□ 0.54
ARFGAP1-202ENST00000370275 PLEKHF1Q96S99 279 aa18.44■□□□□ 0.54
ARFGAP1-202ENST00000370275 TMEM57Q8N5G2 664 aa18.44■□□□□ 0.54
ARFGAP1-202ENST00000370275 GZF1Q9H116 711 aaPredicted RBP18.43■□□□□ 0.54
ARFGAP1-202ENST00000370275 PRAM1Q96QH2 718 aa18.43■□□□□ 0.54
ARFGAP1-202ENST00000370275 FYB1O15117 783 aa18.43■□□□□ 0.54
ARFGAP1-202ENST00000370275 RPGRIP1LQ68CZ1 1315 aa18.42■□□□□ 0.54
ARFGAP1-202ENST00000370275 POGZQ7Z3K3 1410 aa18.42■□□□□ 0.54
ARFGAP1-202ENST00000370275 SIGLEC1Q9BZZ2 1709 aa18.41■□□□□ 0.54
ARFGAP1-202ENST00000370275 ATF7IPQ6VMQ6 1270 aa18.41■□□□□ 0.54
ARFGAP1-202ENST00000370275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.41■□□□□ 0.54
ARFGAP1-202ENST00000370275 ABCC3O15438 1527 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms