RNA–Protein interactions for RNA: ENST00000369682.4

PLXNA3-201, Transcript of plexin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA3, Length 10,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-201ENST00000369682 ZFP91Q96JP5 570 aaPredicted RBP14□□□□□ -0.17
PLXNA3-201ENST00000369682 APPP05067 770 aa14□□□□□ -0.17
PLXNA3-201ENST00000369682 LMOD3Q0VAK6 560 aa14□□□□□ -0.17
PLXNA3-201ENST00000369682 RUNDC1Q96C34 613 aa14□□□□□ -0.17
PLXNA3-201ENST00000369682 C9orf78Q9NZ63 289 aaPredicted RBP13.99□□□□□ -0.17
PLXNA3-201ENST00000369682 TRERF1Q96PN7 1200 aa13.99□□□□□ -0.17
PLXNA3-201ENST00000369682 IFIT2P09913 472 aaKnown RBP13.99□□□□□ -0.17
PLXNA3-201ENST00000369682 NBPF8Q3BBV2 869 aa13.99□□□□□ -0.17
PLXNA3-201ENST00000369682 SASS6Q6UVJ0 657 aa13.99□□□□□ -0.17
PLXNA3-201ENST00000369682 PRM3Q9NNZ6 103 aa13.98□□□□□ -0.17
PLXNA3-201ENST00000369682 ATP6V1DQ9Y5K8 247 aa13.98□□□□□ -0.17
PLXNA3-201ENST00000369682 NBPF1Q3BBV0 1214 aa13.98□□□□□ -0.17
PLXNA3-201ENST00000369682 GGNBP2Q9H3C7 697 aa13.98□□□□□ -0.17
PLXNA3-201ENST00000369682 HECW1Q76N89 1606 aa13.98□□□□□ -0.17
PLXNA3-201ENST00000369682 INTS3Q68E01 1043 aaKnown RBP13.98□□□□□ -0.17
PLXNA3-201ENST00000369682 TIAM1Q13009 1591 aa13.98□□□□□ -0.17
PLXNA3-201ENST00000369682 NEK4P51957 841 aa13.98□□□□□ -0.17
PLXNA3-201ENST00000369682 STK3Q13188 491 aa13.98□□□□□ -0.17
PLXNA3-201ENST00000369682 FKBP5Q13451 457 aaPredicted RBP13.97□□□□□ -0.17
PLXNA3-201ENST00000369682 TMEM132EQ6IEE7 984 aa13.97□□□□□ -0.17
PLXNA3-201ENST00000369682 RAD21O60216 631 aa13.97□□□□□ -0.17
PLXNA3-201ENST00000369682 NUCB2P80303 420 aa13.97□□□□□ -0.17
PLXNA3-201ENST00000369682 MARCH6O60337 910 aa13.97□□□□□ -0.17
PLXNA3-201ENST00000369682 NAP1L1P55209 391 aaKnown RBP13.97□□□□□ -0.17
PLXNA3-201ENST00000369682 BRD4O60885 1362 aaPredicted RBP13.97□□□□□ -0.17
PLXNA3-201ENST00000369682 XPCQ01831 940 aaPredicted RBP13.96□□□□□ -0.17
PLXNA3-201ENST00000369682 COG3Q96JB2 828 aa13.96□□□□□ -0.17
PLXNA3-201ENST00000369682 MTMR7Q9Y216 660 aa13.96□□□□□ -0.17
PLXNA3-201ENST00000369682 CCDC173Q0VFZ6 552 aa13.96□□□□□ -0.17
PLXNA3-201ENST00000369682 ARHGAP5Q13017 1502 aa13.96□□□□□ -0.18
PLXNA3-201ENST00000369682 CFTRP13569 1480 aa13.96□□□□□ -0.18
PLXNA3-201ENST00000369682 PPP2R1AP30153 589 aa13.96□□□□□ -0.18
PLXNA3-201ENST00000369682 FAM177A1Q8N128 213 aaPredicted RBP13.96□□□□□ -0.18
PLXNA3-201ENST00000369682 DIAPH1O60610 1272 aaKnown RBP13.95□□□□□ -0.18
PLXNA3-201ENST00000369682 TSR1Q2NL82 804 aaKnown RBP13.95□□□□□ -0.18
PLXNA3-201ENST00000369682 CFAP65Q6ZU64 1925 aaKnown RBP13.95□□□□□ -0.18
PLXNA3-201ENST00000369682 NFXL1Q6ZNB6 911 aa13.95□□□□□ -0.18
PLXNA3-201ENST00000369682 SMG6Q86US8 1419 aaKnown RBP13.95□□□□□ -0.18
PLXNA3-201ENST00000369682 CASKIN1Q8WXD9 1431 aa13.95□□□□□ -0.18
PLXNA3-201ENST00000369682 ATP2B1P20020 1258 aa13.95□□□□□ -0.18
PLXNA3-201ENST00000369682 FYB1O15117 783 aa13.94□□□□□ -0.18
PLXNA3-201ENST00000369682 CPLX1O14810 134 aa13.94□□□□□ -0.18
PLXNA3-201ENST00000369682 AIMP1Q12904 312 aaKnown RBP13.94□□□□□ -0.18
PLXNA3-201ENST00000369682 EXOSC9Q06265 439 aaKnown RBP13.94□□□□□ -0.18
PLXNA3-201ENST00000369682 JPH4Q96JJ6 628 aa13.94□□□□□ -0.18
PLXNA3-201ENST00000369682 SYCE3A1L190 88 aa13.94□□□□□ -0.18
PLXNA3-201ENST00000369682 TCP11L2Q8N4U5 519 aa13.94□□□□□ -0.18
PLXNA3-201ENST00000369682 IGF1RP08069 1367 aa13.93□□□□□ -0.18
PLXNA3-201ENST00000369682 ESPNB1AK53 854 aa13.93□□□□□ -0.18
PLXNA3-201ENST00000369682 TPM1P09493 284 aa13.93□□□□□ -0.18
PLXNA3-201ENST00000369682 CCDC73Q6ZRK6 1079 aa13.93□□□□□ -0.18
PLXNA3-201ENST00000369682 EVC2Q86UK5 1308 aa13.93□□□□□ -0.18
PLXNA3-201ENST00000369682 EHBP1L1Q8N3D4 1523 aa13.93□□□□□ -0.18
PLXNA3-201ENST00000369682 MCM4P33991 863 aa13.93□□□□□ -0.18
PLXNA3-201ENST00000369682 ZBTB9Q96C00 473 aa13.93□□□□□ -0.18
PLXNA3-201ENST00000369682 TSPYL4Q9UJ04 414 aa13.93□□□□□ -0.18
PLXNA3-201ENST00000369682 PCF11O94913 1555 aaKnown RBP13.93□□□□□ -0.18
PLXNA3-201ENST00000369682 IBSPP21815 317 aaPredicted RBP13.93□□□□□ -0.18
PLXNA3-201ENST00000369682 ZKSCAN1P17029 563 aaPredicted RBP13.92□□□□□ -0.18
PLXNA3-201ENST00000369682 CBX1P83916 185 aa13.92□□□□□ -0.18
PLXNA3-201ENST00000369682 AKAP17AQ02040 695 aaKnown RBP13.92□□□□□ -0.18
PLXNA3-201ENST00000369682 CAGE1Q8TC20 777 aa13.92□□□□□ -0.18
PLXNA3-201ENST00000369682 DDX54Q8TDD1 881 aaKnown RBP13.92□□□□□ -0.18
PLXNA3-201ENST00000369682 BRPF1P55201 1214 aaPredicted RBP13.91□□□□□ -0.18
PLXNA3-201ENST00000369682 MTHFSP49914 203 aa13.91□□□□□ -0.18
PLXNA3-201ENST00000369682 PTPRGP23470 1445 aa13.91□□□□□ -0.18
PLXNA3-201ENST00000369682 RUFY2Q8WXA3 655 aa13.91□□□□□ -0.18
PLXNA3-201ENST00000369682 FAM193AP78312 1265 aa13.91□□□□□ -0.18
PLXNA3-201ENST00000369682 SMARCA5O60264 1052 aaPredicted RBP13.9□□□□□ -0.18
PLXNA3-201ENST00000369682 GPS2Q13227 327 aa13.9□□□□□ -0.18
PLXNA3-201ENST00000369682 AQRO60306 1485 aaKnown RBP eCLIP13.9□□□□□ -0.184e-7■■■■■ 29
PLXNA3-201ENST00000369682 PNISRQ8TF01 805 aaKnown RBP13.9□□□□□ -0.18
PLXNA3-201ENST00000369682 CHMP4CQ96CF2 233 aa13.9□□□□□ -0.18
PLXNA3-201ENST00000369682 CCDC34Q96HJ3 373 aa13.9□□□□□ -0.18
PLXNA3-201ENST00000369682 TMX1Q9H3N1 280 aa13.9□□□□□ -0.18
PLXNA3-201ENST00000369682 CAMK4Q16566 473 aa13.89□□□□□ -0.19
PLXNA3-201ENST00000369682 RSPH4AQ5TD94 716 aa13.89□□□□□ -0.19
PLXNA3-201ENST00000369682 G3BP1Q13283 466 aaKnown RBP eCLIP13.88□□□□□ -0.19
PLXNA3-201ENST00000369682 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
PLXNA3-201ENST00000369682 RBM27Q9P2N5 1060 aaKnown RBP13.88□□□□□ -0.19
PLXNA3-201ENST00000369682 RRBP1Q9P2E9 1410 aaKnown RBP13.88□□□□□ -0.19
PLXNA3-201ENST00000369682 SDF4Q9BRK5 362 aa13.88□□□□□ -0.19
PLXNA3-201ENST00000369682 EFCAB5A4FU69 1503 aa13.88□□□□□ -0.19
PLXNA3-201ENST00000369682 LARP6Q9BRS8 491 aaKnown RBP13.88□□□□□ -0.19
PLXNA3-201ENST00000369682 KIF3AQ9Y496 699 aa13.88□□□□□ -0.19
PLXNA3-201ENST00000369682 API5Q9BZZ5 524 aaKnown RBP13.88□□□□□ -0.19
PLXNA3-201ENST00000369682 TRIM29Q14134 588 aa13.88□□□□□ -0.19
PLXNA3-201ENST00000369682 SPDYE4A6NLX3 237 aa13.87□□□□□ -0.19
PLXNA3-201ENST00000369682 RRP9O43818 475 aaKnown RBP13.87□□□□□ -0.19
PLXNA3-201ENST00000369682 CCDC70Q6NSX1 233 aa13.87□□□□□ -0.19
PLXNA3-201ENST00000369682 SSFA2P28290 1259 aa13.87□□□□□ -0.19
PLXNA3-201ENST00000369682 PTPN23Q9H3S7 1636 aa13.87□□□□□ -0.19
PLXNA3-201ENST00000369682 NEUROD6Q96NK8 337 aa13.87□□□□□ -0.19
PLXNA3-201ENST00000369682 PLCD4Q9BRC7 762 aa13.87□□□□□ -0.19
PLXNA3-201ENST00000369682 C1orf141Q5JVX7 400 aa13.87□□□□□ -0.19
PLXNA3-201ENST00000369682 DNAJC2Q99543 621 aaKnown RBP13.87□□□□□ -0.19
PLXNA3-201ENST00000369682 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
PLXNA3-201ENST00000369682 K7ELQ4 463 aaPredicted RBP13.86□□□□□ -0.19
PLXNA3-201ENST00000369682 AEBP1Q8IUX7 1158 aa13.86□□□□□ -0.19
PLXNA3-201ENST00000369682 ARGLU1Q9NWB6 273 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms