RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 ROBO2Q9HCK4 1378 aa21.98■■□□□ 1.11
LMNA-203ENST00000368297 MIER1Q8N108 512 aa21.98■■□□□ 1.11
LMNA-203ENST00000368297 CHD2O14647 1828 aaKnown RBP21.97■■□□□ 1.11
LMNA-203ENST00000368297 TULP4Q9NRJ4 1543 aa21.96■■□□□ 1.11
LMNA-203ENST00000368297 PTCH1Q13635 1447 aa21.94■■□□□ 1.1
LMNA-203ENST00000368297 STRCQ7RTU9 1775 aa21.93■■□□□ 1.1
LMNA-203ENST00000368297 KCNA6P17658 529 aa21.92■■□□□ 1.1
LMNA-203ENST00000368297 SRPK2P78362 688 aaKnown RBP21.91■■□□□ 1.1
LMNA-203ENST00000368297 MYOM1P52179 1685 aa21.9■■□□□ 1.1
LMNA-203ENST00000368297 CABP2Q9NPB3 220 aa21.9■■□□□ 1.1
LMNA-203ENST00000368297 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.89■■□□□ 1.09
LMNA-203ENST00000368297 CDK19Q9BWU1 502 aa21.88■■□□□ 1.09
LMNA-203ENST00000368297 PUS7Q96PZ0 661 aaKnown RBP21.88■■□□□ 1.09
LMNA-203ENST00000368297 NWD1Q149M9 1564 aa21.88■■□□□ 1.09
LMNA-203ENST00000368297 ADGRB2O60241 1585 aa21.86■■□□□ 1.09
LMNA-203ENST00000368297 TMC1Q8TDI8 760 aa21.85■■□□□ 1.09
LMNA-203ENST00000368297 WASLO00401 505 aaPredicted RBP21.85■■□□□ 1.09
LMNA-203ENST00000368297 ANP32CO43423 234 aa21.85■■□□□ 1.09
LMNA-203ENST00000368297 PANK3Q9H999 370 aa21.85■■□□□ 1.09
LMNA-203ENST00000368297 ATAD2Q6PL18 1390 aa21.84■■□□□ 1.09
LMNA-203ENST00000368297 NKTRP30414 1462 aaKnown RBP21.81■■□□□ 1.08
LMNA-203ENST00000368297 PROSER2Q86WR7 435 aaPredicted RBP21.79■■□□□ 1.08
LMNA-203ENST00000368297 SLC12A5Q9H2X9 1139 aa21.79■■□□□ 1.08
LMNA-203ENST00000368297 RBM33Q96EV2 1170 aaKnown RBP21.79■■□□□ 1.08
LMNA-203ENST00000368297 NALCNQ8IZF0 1738 aa21.78■■□□□ 1.08
LMNA-203ENST00000368297 STRCP1A6NGW2 1772 aa21.78■■□□□ 1.08
LMNA-203ENST00000368297 CNGB1Q14028 1251 aaPredicted RBP21.78■■□□□ 1.08
LMNA-203ENST00000368297 C14orf37Q86TY3 774 aa21.78■■□□□ 1.08
LMNA-203ENST00000368297 DMRT2Q9Y5R5 561 aa21.78■■□□□ 1.08
LMNA-203ENST00000368297 NINLQ9Y2I6 1382 aa21.78■■□□□ 1.08
LMNA-203ENST00000368297 NUDT16Q96DE0 195 aaKnown RBP21.75■■□□□ 1.07
LMNA-203ENST00000368297 KNSTRNQ9Y448 316 aa21.75■■□□□ 1.07
LMNA-203ENST00000368297 ADGRL3Q9HAR2 1447 aa21.75■■□□□ 1.07
LMNA-203ENST00000368297 PER1O15534 1290 aaPredicted RBP21.74■■□□□ 1.07
LMNA-203ENST00000368297 CENPBP07199 599 aaPredicted RBP21.74■■□□□ 1.07
LMNA-203ENST00000368297 NUTM2FA1L443 756 aa21.73■■□□□ 1.07
LMNA-203ENST00000368297 CABP1Q9NZU7 370 aa21.73■■□□□ 1.07
LMNA-203ENST00000368297 CDC42BPGQ6DT37 1551 aa21.73■■□□□ 1.07
LMNA-203ENST00000368297 ATP7BP35670 1465 aa21.73■■□□□ 1.07
LMNA-203ENST00000368297 PPIP5K1Q6PFW1 1433 aa21.73■■□□□ 1.07
LMNA-203ENST00000368297 ANKRD36BQ8N2N9 1353 aa21.73■■□□□ 1.07
LMNA-203ENST00000368297 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
LMNA-203ENST00000368297 PRR36Q9H6K5 1346 aa21.72■■□□□ 1.07
LMNA-203ENST00000368297 TERF2IPQ9NYB0 399 aa21.72■■□□□ 1.07
LMNA-203ENST00000368297 AEBP2Q6ZN18 517 aaPredicted RBP21.71■■□□□ 1.07
LMNA-203ENST00000368297 HDGFL2Q7Z4V5 671 aaPredicted RBP21.71■■□□□ 1.07
LMNA-203ENST00000368297 CCDC61Q9Y6R9 512 aa21.71■■□□□ 1.07
LMNA-203ENST00000368297 ZNF335Q9H4Z2 1342 aaPredicted RBP21.7■■□□□ 1.06
LMNA-203ENST00000368297 PRKRIP1Q9H875 184 aaPredicted RBP21.7■■□□□ 1.06
LMNA-203ENST00000368297 CARD14Q9BXL6 1004 aa21.69■■□□□ 1.06
LMNA-203ENST00000368297 TOPAZ1Q8N9V7 1692 aa21.69■■□□□ 1.06
LMNA-203ENST00000368297 NSD3Q9BZ95 1437 aa21.69■■□□□ 1.06
LMNA-203ENST00000368297 USP32Q8NFA0 1604 aa21.69■■□□□ 1.06
LMNA-203ENST00000368297 TMEM94Q12767 1356 aa21.69■■□□□ 1.06
LMNA-203ENST00000368297 KTN1Q86UP2 1357 aaKnown RBP21.69■■□□□ 1.06
LMNA-203ENST00000368297 ITSN1Q15811 1721 aa21.69■■□□□ 1.06
LMNA-203ENST00000368297 A0A1W2PP64 1363 aa21.68■■□□□ 1.06
LMNA-203ENST00000368297 CC2D1BQ5T0F9 858 aaKnown RBP21.68■■□□□ 1.06
LMNA-203ENST00000368297 ANKARQ7Z5J8 1434 aa21.67■■□□□ 1.06
LMNA-203ENST00000368297 RGPD8O14715 1765 aaPredicted RBP21.67■■□□□ 1.06
LMNA-203ENST00000368297 CD163L1Q9NR16 1453 aa21.67■■□□□ 1.06
LMNA-203ENST00000368297 NCOA3Q9Y6Q9 1424 aa21.65■■□□□ 1.06
LMNA-203ENST00000368297 C19orf44Q9H6X5 657 aa21.64■■□□□ 1.05
LMNA-203ENST00000368297 AMER1Q5JTC6 1135 aaPredicted RBP21.63■■□□□ 1.05
LMNA-203ENST00000368297 RALBP1Q15311 655 aa21.63■■□□□ 1.05
LMNA-203ENST00000368297 YTHDC1Q96MU7 727 aaKnown RBP21.63■■□□□ 1.05
LMNA-203ENST00000368297 AKAP12Q02952 1782 aa21.62■■□□□ 1.05
LMNA-203ENST00000368297 LRRC7Q96NW7 1537 aa21.62■■□□□ 1.05
LMNA-203ENST00000368297 PLEKHG3A1L390 1219 aa21.62■■□□□ 1.05
LMNA-203ENST00000368297 CCER2I3L3R5 266 aa21.62■■□□□ 1.05
LMNA-203ENST00000368297 CGNL1Q0VF96 1302 aa21.62■■□□□ 1.05
LMNA-203ENST00000368297 NPC1L1Q9UHC9 1359 aa21.61■■□□□ 1.05
LMNA-203ENST00000368297 XIRP1Q702N8 1843 aaKnown RBP21.61■■□□□ 1.05
LMNA-203ENST00000368297 CPSF1Q10570 1443 aaKnown RBP21.6■■□□□ 1.05
LMNA-203ENST00000368297 ATF3P18847 181 aa21.6■■□□□ 1.05
LMNA-203ENST00000368297 MSH6P52701 1360 aa21.6■■□□□ 1.05
LMNA-203ENST00000368297 PARD3Q8TEW0 1356 aa21.6■■□□□ 1.05
LMNA-203ENST00000368297 PMFBP1Q8TBY8 1022 aa21.6■■□□□ 1.05
LMNA-203ENST00000368297 MON2Q7Z3U7 1717 aa21.59■■□□□ 1.05
LMNA-203ENST00000368297 ACEP12821 1306 aa21.59■■□□□ 1.05
LMNA-203ENST00000368297 ZNF692Q9BU19 519 aaPredicted RBP21.59■■□□□ 1.05
LMNA-203ENST00000368297 NGDNQ8NEJ9 315 aaKnown RBP21.58■■□□□ 1.05
LMNA-203ENST00000368297 DCCP43146 1447 aa21.58■■□□□ 1.04
LMNA-203ENST00000368297 MYBBP1AQ9BQG0 1328 aaKnown RBP21.57■■□□□ 1.04
LMNA-203ENST00000368297 EDC4Q6P2E9 1401 aaKnown RBP21.56■■□□□ 1.04
LMNA-203ENST00000368297 KIF20BQ96Q89 1820 aa21.56■■□□□ 1.04
LMNA-203ENST00000368297 ESCO1Q5FWF5 840 aa21.56■■□□□ 1.04
LMNA-203ENST00000368297 PHF8Q9UPP1 1060 aa21.56■■□□□ 1.04
LMNA-203ENST00000368297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.55■■□□□ 1.04
LMNA-203ENST00000368297 NSD2O96028 1365 aa21.55■■□□□ 1.04
LMNA-203ENST00000368297 CADPS2Q86UW7 1296 aa21.54■■□□□ 1.04
LMNA-203ENST00000368297 POLR3AO14802 1390 aaPredicted RBP21.54■■□□□ 1.04
LMNA-203ENST00000368297 MORC1Q86VD1 984 aa21.53■■□□□ 1.04
LMNA-203ENST00000368297 C1orf167Q5SNV9 1468 aa21.52■■□□□ 1.04
LMNA-203ENST00000368297 USP6P35125 1406 aa21.52■■□□□ 1.04
LMNA-203ENST00000368297 MST1RQ04912 1400 aa21.52■■□□□ 1.04
LMNA-203ENST00000368297 ANKRD26Q9UPS8 1709 aa21.51■■□□□ 1.03
LMNA-203ENST00000368297 NRKQ7Z2Y5 1582 aa21.51■■□□□ 1.03
LMNA-203ENST00000368297 GGNBP2Q9H3C7 697 aa21.51■■□□□ 1.03
LMNA-203ENST00000368297 MRS2Q9HD23 443 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms