RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 ALDH1L2Q3SY69 923 aa9.11□□□□□ -0.95
VTA1-202ENST00000367630 BACH2Q9BYV9 841 aa9.11□□□□□ -0.95
VTA1-202ENST00000367630 SOS1Q07889 1333 aaPredicted RBP9.11□□□□□ -0.95
VTA1-202ENST00000367630 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.11□□□□□ -0.95
VTA1-202ENST00000367630 CRBNQ96SW2 442 aa9.11□□□□□ -0.95
VTA1-202ENST00000367630 KIF1BO60333 1816 aa9.11□□□□□ -0.95
VTA1-202ENST00000367630 MCM2P49736 904 aa9.1□□□□□ -0.95
VTA1-202ENST00000367630 ZNF692Q9BU19 519 aaPredicted RBP9.1□□□□□ -0.95
VTA1-202ENST00000367630 SALL2Q9Y467 1007 aaPredicted RBP9.1□□□□□ -0.95
VTA1-202ENST00000367630 DZIP1LQ8IYY4 767 aaKnown RBP9.1□□□□□ -0.95
VTA1-202ENST00000367630 SMC4Q9NTJ3 1288 aa9.1□□□□□ -0.95
VTA1-202ENST00000367630 POGZQ7Z3K3 1410 aa9.1□□□□□ -0.95
VTA1-202ENST00000367630 DIAPH1O60610 1272 aaKnown RBP9.1□□□□□ -0.95
VTA1-202ENST00000367630 SLFN5Q08AF3 891 aa9.1□□□□□ -0.95
VTA1-202ENST00000367630 GPATCH3Q96I76 525 aa9.1□□□□□ -0.95
VTA1-202ENST00000367630 RTF1Q92541 710 aaKnown RBP9.1□□□□□ -0.95
VTA1-202ENST00000367630 CHMP5Q9NZZ3 219 aa9.1□□□□□ -0.95
VTA1-202ENST00000367630 EXOC6Q8TAG9 804 aa9.1□□□□□ -0.95
VTA1-202ENST00000367630 GSE1Q14687 1217 aa9.09□□□□□ -0.95
VTA1-202ENST00000367630 ST18O60284 1047 aa9.09□□□□□ -0.95
VTA1-202ENST00000367630 EID1Q9Y6B2 187 aa9.09□□□□□ -0.95
VTA1-202ENST00000367630 FRAT1Q92837 279 aaPredicted RBP9.09□□□□□ -0.95
VTA1-202ENST00000367630 GOLGA6L3A6NEY3 463 aa9.08□□□□□ -0.96
VTA1-202ENST00000367630 U2SURPO15042 1029 aaKnown RBP9.08□□□□□ -0.96
VTA1-202ENST00000367630 CD109Q6YHK3 1445 aa9.08□□□□□ -0.96
VTA1-202ENST00000367630 KLHL34Q8N239 644 aa9.08□□□□□ -0.96
VTA1-202ENST00000367630 ZC3H13Q5T200 1668 aaKnown RBP9.08□□□□□ -0.96
VTA1-202ENST00000367630 NRDCO43847 1150 aa9.08□□□□□ -0.96
VTA1-202ENST00000367630 REC8O95072 547 aa9.08□□□□□ -0.96
VTA1-202ENST00000367630 ATP6V1DQ9Y5K8 247 aa9.08□□□□□ -0.96
VTA1-202ENST00000367630 SPHKAPQ2M3C7 1700 aa9.08□□□□□ -0.96
VTA1-202ENST00000367630 DHX8Q14562 1220 aaKnown RBP9.07□□□□□ -0.96
VTA1-202ENST00000367630 ZCCHC11Q5TAX3 1644 aaKnown RBP9.07□□□□□ -0.96
VTA1-202ENST00000367630 HSP90AB4PQ58FF6 505 aa9.07□□□□□ -0.96
VTA1-202ENST00000367630 CEP152O94986 1710 aa9.07□□□□□ -0.96
VTA1-202ENST00000367630 RGS3P49796 1198 aa9.07□□□□□ -0.96
VTA1-202ENST00000367630 NUCB2P80303 420 aa9.07□□□□□ -0.96
VTA1-202ENST00000367630 PLEKHH1Q9ULM0 1364 aa9.07□□□□□ -0.96
VTA1-202ENST00000367630 COG3Q96JB2 828 aa9.07□□□□□ -0.96
VTA1-202ENST00000367630 STK31Q9BXU1 1019 aa9.07□□□□□ -0.96
VTA1-202ENST00000367630 KIF24Q5T7B8 1368 aa9.07□□□□□ -0.96
VTA1-202ENST00000367630 BCL11AQ9H165 835 aa9.07□□□□□ -0.96
VTA1-202ENST00000367630 ITPRIPQ8IWB1 547 aa9.06□□□□□ -0.96
VTA1-202ENST00000367630 C14orf93Q9H972 538 aaKnown RBP9.06□□□□□ -0.96
VTA1-202ENST00000367630 RNF17Q9BXT8 1623 aaKnown RBP9.06□□□□□ -0.96
VTA1-202ENST00000367630 FCHSD2O94868 740 aa9.06□□□□□ -0.96
VTA1-202ENST00000367630 MLH3Q9UHC1 1453 aa9.06□□□□□ -0.96
VTA1-202ENST00000367630 REREQ9P2R6 1566 aa9.05□□□□□ -0.96
VTA1-202ENST00000367630 ZFYVE16Q7Z3T8 1539 aa9.05□□□□□ -0.96
VTA1-202ENST00000367630 CHD1O14646 1710 aa9.05□□□□□ -0.96
VTA1-202ENST00000367630 KIF3AQ9Y496 699 aa9.05□□□□□ -0.96
VTA1-202ENST00000367630 GGT6Q6P531 493 aa9.05□□□□□ -0.96
VTA1-202ENST00000367630 NSD3Q9BZ95 1437 aa9.05□□□□□ -0.96
VTA1-202ENST00000367630 ARHGAP45Q92619 1136 aa9.05□□□□□ -0.96
VTA1-202ENST00000367630 CWC22Q9HCG8 908 aaKnown RBP9.04□□□□□ -0.96
VTA1-202ENST00000367630 TPM3P06753 285 aa9.04□□□□□ -0.96
VTA1-202ENST00000367630 LETM1O95202 739 aaPredicted RBP9.04□□□□□ -0.96
VTA1-202ENST00000367630 ADAMTS8Q9UP79 889 aa9.04□□□□□ -0.96
VTA1-202ENST00000367630 ABCA9Q8IUA7 1624 aa9.04□□□□□ -0.96
VTA1-202ENST00000367630 CDC42BPBQ9Y5S2 1711 aa9.04□□□□□ -0.96
VTA1-202ENST00000367630 KDM6BO15054 1643 aa9.03□□□□□ -0.96
VTA1-202ENST00000367630 ASXL2Q76L83 1435 aa9.03□□□□□ -0.96
VTA1-202ENST00000367630 MTERF4Q7Z6M4 381 aaKnown RBP9.03□□□□□ -0.96
VTA1-202ENST00000367630 HECW2Q9P2P5 1572 aa9.03□□□□□ -0.96
VTA1-202ENST00000367630 INTS3Q68E01 1043 aaKnown RBP9.03□□□□□ -0.96
VTA1-202ENST00000367630 E9PCH4 1651 aa9.03□□□□□ -0.96
VTA1-202ENST00000367630 APAF1O14727 1248 aa9.03□□□□□ -0.96
VTA1-202ENST00000367630 ARHGAP31Q2M1Z3 1444 aa9.03□□□□□ -0.96
VTA1-202ENST00000367630 EFCAB6Q5THR3 1501 aa9.03□□□□□ -0.96
VTA1-202ENST00000367630 MADDQ8WXG6 1647 aa9.03□□□□□ -0.96
VTA1-202ENST00000367630 MAP3K4Q9Y6R4 1608 aa9.03□□□□□ -0.96
VTA1-202ENST00000367630 MSNP26038 577 aaKnown RBP9.02□□□□□ -0.97
VTA1-202ENST00000367630 LRRFIP1Q32MZ4 808 aaKnown RBP9.02□□□□□ -0.97
VTA1-202ENST00000367630 SIRT1Q96EB6 747 aa9.02□□□□□ -0.97
VTA1-202ENST00000367630 DISP3Q9P2K9 1392 aa9.02□□□□□ -0.97
VTA1-202ENST00000367630 CDC45O75419 566 aa9.02□□□□□ -0.97
VTA1-202ENST00000367630 MVPQ14764 893 aaKnown RBP9.02□□□□□ -0.97
VTA1-202ENST00000367630 CHAF1AQ13111 956 aaPredicted RBP9.02□□□□□ -0.97
VTA1-202ENST00000367630 SRCIN1Q9C0H9 1055 aa9.02□□□□□ -0.97
VTA1-202ENST00000367630 RABEP1Q15276 862 aa9.01□□□□□ -0.97
VTA1-202ENST00000367630 RUFY2Q8WXA3 655 aa9.01□□□□□ -0.97
VTA1-202ENST00000367630 USP32Q8NFA0 1604 aa9.01□□□□□ -0.97
VTA1-202ENST00000367630 MED14O60244 1454 aa9.01□□□□□ -0.97
VTA1-202ENST00000367630 TNNT2P45379 298 aaPredicted RBP9.01□□□□□ -0.97
VTA1-202ENST00000367630 MRE11P49959 708 aa9.01□□□□□ -0.97
VTA1-202ENST00000367630 GAS2L2Q8NHY3 880 aa9.01□□□□□ -0.97
VTA1-202ENST00000367630 KIAA1211Q6ZU35 1233 aa9.01□□□□□ -0.97
VTA1-202ENST00000367630 IFT57Q9NWB7 429 aa9.01□□□□□ -0.97
VTA1-202ENST00000367630 INO80Q9ULG1 1556 aaPredicted RBP9□□□□□ -0.97
VTA1-202ENST00000367630 TTC21BQ7Z4L5 1316 aa9□□□□□ -0.97
VTA1-202ENST00000367630 HIP1O00291 1037 aa9□□□□□ -0.97
VTA1-202ENST00000367630 LAS1LQ9Y4W2 734 aaKnown RBP9□□□□□ -0.97
VTA1-202ENST00000367630 TRAPPC8Q9Y2L5 1435 aa9□□□□□ -0.97
VTA1-202ENST00000367630 FAM43AQ8N2R8 423 aa9□□□□□ -0.97
VTA1-202ENST00000367630 MAP7D2Q96T17 732 aa9□□□□□ -0.97
VTA1-202ENST00000367630 EPB41L2O43491 1005 aaKnown RBP8.99□□□□□ -0.97
VTA1-202ENST00000367630 DEPDC5O75140 1603 aa8.99□□□□□ -0.97
VTA1-202ENST00000367630 HDAC1Q13547 482 aaPredicted RBP8.99□□□□□ -0.97
VTA1-202ENST00000367630 TESK2Q96S53 571 aa8.99□□□□□ -0.97
VTA1-202ENST00000367630 TRAK1Q9UPV9 953 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms