RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 SETBP1Q9Y6X0 1596 aa15.13■□□□□ 0.01
NUP43-203ENST00000367404 NUP155O75694 1391 aa15.12■□□□□ 0.01
NUP43-203ENST00000367404 SETD1AO15047 1707 aaKnown RBP15.12■□□□□ 0.01
NUP43-203ENST00000367404 XRN1Q8IZH2 1706 aaKnown RBP15.12■□□□□ 0.01
NUP43-203ENST00000367404 NUTM2DQ5VT03 806 aaPredicted RBP15.12■□□□□ 0.01
NUP43-203ENST00000367404 NRXN3Q9Y4C0 1643 aa15.12■□□□□ 0.01
NUP43-203ENST00000367404 ATF3P18847 181 aa15.11■□□□□ 0.01
NUP43-203ENST00000367404 C14orf37Q86TY3 774 aa15.11■□□□□ 0.01
NUP43-203ENST00000367404 BRINP3Q76B58 766 aa15.1■□□□□ 0.01
NUP43-203ENST00000367404 AMOTL2Q9Y2J4 779 aa15.1■□□□□ 0.01
NUP43-203ENST00000367404 ASXL1Q8IXJ9 1541 aa15.09■□□□□ 0.01
NUP43-203ENST00000367404 MST1RQ04912 1400 aa15.09■□□□□ 0.01
NUP43-203ENST00000367404 ZNF772Q68DY9 489 aaPredicted RBP15.08■□□□□ 0
NUP43-203ENST00000367404 SETD5Q9C0A6 1442 aa15.08■□□□□ 0
NUP43-203ENST00000367404 MEX3CQ5U5Q3 659 aaKnown RBP15.05■□□□□ -0
NUP43-203ENST00000367404 METP08581 1390 aa15.05■□□□□ -0
NUP43-203ENST00000367404 ADGRL3Q9HAR2 1447 aa15.05■□□□□ -0
NUP43-203ENST00000367404 CDK12Q9NYV4 1490 aaPredicted RBP15.05■□□□□ -0
NUP43-203ENST00000367404 NHSL1Q5SYE7 1610 aa15.05■□□□□ -0
NUP43-203ENST00000367404 SPHKAPQ2M3C7 1700 aa15.05■□□□□ -0
NUP43-203ENST00000367404 NEXMIFQ5QGS0 1516 aa15.04■□□□□ -0
NUP43-203ENST00000367404 UPF1Q92900 1129 aaKnown RBP eCLIP15.03■□□□□ -0
NUP43-203ENST00000367404 CLTCL1P53675 1640 aa15.02□□□□□ -0.01
NUP43-203ENST00000367404 PRAG1Q86YV5 1406 aa15□□□□□ -0.01
NUP43-203ENST00000367404 PTCH1Q13635 1447 aa15□□□□□ -0.01
NUP43-203ENST00000367404 PNPLA6Q8IY17 1366 aa14.99□□□□□ -0.01
NUP43-203ENST00000367404 CD44P16070 742 aaKnown RBP14.99□□□□□ -0.01
NUP43-203ENST00000367404 RXRBP28702 533 aa14.99□□□□□ -0.01
NUP43-203ENST00000367404 ITGAEP38570 1179 aa14.99□□□□□ -0.01
NUP43-203ENST00000367404 FKBP8Q14318 412 aa14.99□□□□□ -0.01
NUP43-203ENST00000367404 ZNF326Q5BKZ1 582 aaKnown RBP14.99□□□□□ -0.01
NUP43-203ENST00000367404 TRIM52Q96A61 297 aa14.99□□□□□ -0.01
NUP43-203ENST00000367404 NALCNQ8IZF0 1738 aa14.99□□□□□ -0.01
NUP43-203ENST00000367404 AFF2P51816 1311 aa14.98□□□□□ -0.01
NUP43-203ENST00000367404 LRRC59Q96AG4 307 aaKnown RBP14.98□□□□□ -0.01
NUP43-203ENST00000367404 LAMC1P11047 1609 aa14.98□□□□□ -0.01
NUP43-203ENST00000367404 C1orf167Q5SNV9 1468 aa14.97□□□□□ -0.01
NUP43-203ENST00000367404 NUTM2BA6NNL0 878 aaPredicted RBP14.97□□□□□ -0.01
NUP43-203ENST00000367404 NUTM2EB1AL46 878 aaPredicted RBP14.97□□□□□ -0.01
NUP43-203ENST00000367404 NUTM2AQ8IVF1 878 aaPredicted RBP14.97□□□□□ -0.01
NUP43-203ENST00000367404 RGS12O14924 1447 aa14.96□□□□□ -0.01
NUP43-203ENST00000367404 NAIPQ13075 1403 aa14.96□□□□□ -0.01
NUP43-203ENST00000367404 RRBP1Q9P2E9 1410 aaKnown RBP14.96□□□□□ -0.01
NUP43-203ENST00000367404 MNX1P50219 401 aaPredicted RBP14.94□□□□□ -0.02
NUP43-203ENST00000367404 DDX17Q92841 729 aaKnown RBP14.94□□□□□ -0.02
NUP43-203ENST00000367404 ROBO2Q9HCK4 1378 aa14.93□□□□□ -0.02
NUP43-203ENST00000367404 GABBR2O75899 941 aa14.92□□□□□ -0.02
NUP43-203ENST00000367404 SOS2Q07890 1332 aaPredicted RBP14.92□□□□□ -0.02
NUP43-203ENST00000367404 RBM6P78332 1123 aaKnown RBP14.91□□□□□ -0.02
NUP43-203ENST00000367404 C8orf37Q96NL8 207 aa14.91□□□□□ -0.02
NUP43-203ENST00000367404 HFM1A2PYH4 1435 aa14.9□□□□□ -0.02
NUP43-203ENST00000367404 VGFO15240 615 aaPredicted RBP14.89□□□□□ -0.03
NUP43-203ENST00000367404 KIF1BO60333 1816 aa14.89□□□□□ -0.03
NUP43-203ENST00000367404 RPGRIP1LQ68CZ1 1315 aa14.89□□□□□ -0.03
NUP43-203ENST00000367404 PPARGC1BQ86YN6 1023 aaKnown RBP14.88□□□□□ -0.03
NUP43-203ENST00000367404 QTRT2Q9H974 415 aaKnown RBP14.88□□□□□ -0.03
NUP43-203ENST00000367404 COL22A1Q8NFW1 1626 aaPredicted RBP14.88□□□□□ -0.03
NUP43-203ENST00000367404 CDC42BPGQ6DT37 1551 aa14.87□□□□□ -0.03
NUP43-203ENST00000367404 ORAI2Q96SN7 254 aa14.87□□□□□ -0.03
NUP43-203ENST00000367404 MYOM2P54296 1465 aa14.87□□□□□ -0.03
NUP43-203ENST00000367404 ATRNO75882 1429 aa14.84□□□□□ -0.03
NUP43-203ENST00000367404 PXDNQ92626 1479 aa14.84□□□□□ -0.03
NUP43-203ENST00000367404 PPLO60437 1756 aa14.84□□□□□ -0.03
NUP43-203ENST00000367404 ADAMTS2O95450 1211 aa14.84□□□□□ -0.03
NUP43-203ENST00000367404 FNBP4Q8N3X1 1017 aaPredicted RBP14.84□□□□□ -0.03
NUP43-203ENST00000367404 NGLY1Q96IV0 654 aa14.84□□□□□ -0.03
NUP43-203ENST00000367404 TECPR2O15040 1411 aa14.83□□□□□ -0.03
NUP43-203ENST00000367404 ZRANB1Q9UGI0 708 aa14.83□□□□□ -0.04
NUP43-203ENST00000367404 SRCAPQ6ZRS2 3230 aa14.83□□□□□ -0.04
NUP43-203ENST00000367404 ATAD2Q6PL18 1390 aa14.83□□□□□ -0.04
NUP43-203ENST00000367404 USP21Q9UK80 565 aa14.82□□□□□ -0.04
NUP43-203ENST00000367404 TRPC5Q9UL62 973 aaPredicted RBP14.82□□□□□ -0.04
NUP43-203ENST00000367404 NPHP3Q7Z494 1330 aa14.82□□□□□ -0.04
NUP43-203ENST00000367404 SPATA31E1Q6ZUB1 1445 aa14.8□□□□□ -0.04
NUP43-203ENST00000367404 BCL9LQ86UU0 1499 aa14.79□□□□□ -0.04
NUP43-203ENST00000367404 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
NUP43-203ENST00000367404 LRPPRCP42704 1394 aaKnown RBP14.78□□□□□ -0.04
NUP43-203ENST00000367404 ADGRF5Q8IZF2 1346 aa14.78□□□□□ -0.04
NUP43-203ENST00000367404 EP400Q96L91 3159 aa14.78□□□□□ -0.04
NUP43-203ENST00000367404 ABCC11Q96J66 1382 aa14.77□□□□□ -0.04
NUP43-203ENST00000367404 CCDC144AA2RUR9 1427 aa14.76□□□□□ -0.05
NUP43-203ENST00000367404 PIK3C2GO75747 1445 aa14.76□□□□□ -0.05
NUP43-203ENST00000367404 ANKRD30BQ9BXX2 1392 aa14.76□□□□□ -0.05
NUP43-203ENST00000367404 KNDC1Q76NI1 1749 aa14.76□□□□□ -0.05
NUP43-203ENST00000367404 ESCO1Q5FWF5 840 aa14.76□□□□□ -0.05
NUP43-203ENST00000367404 MIER1Q8N108 512 aa14.75□□□□□ -0.05
NUP43-203ENST00000367404 IFT172Q9UG01 1749 aa14.75□□□□□ -0.05
NUP43-203ENST00000367404 PLEKHH1Q9ULM0 1364 aa14.74□□□□□ -0.05
NUP43-203ENST00000367404 FOXO3O43524 673 aa14.74□□□□□ -0.05
NUP43-203ENST00000367404 SLIT2O94813 1529 aa14.73□□□□□ -0.05
NUP43-203ENST00000367404 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.73□□□□□ -0.05
NUP43-203ENST00000367404 MARF1Q9Y4F3 1742 aaKnown RBP14.72□□□□□ -0.05
NUP43-203ENST00000367404 KIF1AQ12756 1690 aa14.72□□□□□ -0.05
NUP43-203ENST00000367404 CLCN6P51797 869 aa14.72□□□□□ -0.05
NUP43-203ENST00000367404 XPCQ01831 940 aaPredicted RBP14.72□□□□□ -0.05
NUP43-203ENST00000367404 WAPLQ7Z5K2 1190 aa14.72□□□□□ -0.05
NUP43-203ENST00000367404 YTHDC2Q9H6S0 1430 aaKnown RBP14.72□□□□□ -0.05
NUP43-203ENST00000367404 FMN2Q9NZ56 1722 aa14.72□□□□□ -0.05
NUP43-203ENST00000367404 SPATA31A3Q5VYP0 1347 aa14.71□□□□□ -0.05
NUP43-203ENST00000367404 PAK3O75914 559 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms