RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ABCC11Q96J66 1382 aa21.91■■□□□ 1.1
CTSD-202ENST00000367196 DDX17Q92841 729 aaKnown RBP21.9■■□□□ 1.1
CTSD-202ENST00000367196 SOS2Q07890 1332 aaPredicted RBP21.89■■□□□ 1.1
CTSD-202ENST00000367196 ORAI2Q96SN7 254 aa21.89■■□□□ 1.09
CTSD-202ENST00000367196 STK26Q9P289 416 aa21.89■■□□□ 1.09
CTSD-202ENST00000367196 YTHDC2Q9H6S0 1430 aaKnown RBP21.89■■□□□ 1.09
CTSD-202ENST00000367196 AFF2P51816 1311 aa21.87■■□□□ 1.09
CTSD-202ENST00000367196 NPHP3Q7Z494 1330 aa21.87■■□□□ 1.09
CTSD-202ENST00000367196 NRXN1Q9ULB1 1477 aa21.87■■□□□ 1.09
CTSD-202ENST00000367196 CDK12Q9NYV4 1490 aaPredicted RBP21.86■■□□□ 1.09
CTSD-202ENST00000367196 RXRBP28702 533 aa21.86■■□□□ 1.09
CTSD-202ENST00000367196 ESCO1Q5FWF5 840 aa21.86■■□□□ 1.09
CTSD-202ENST00000367196 TMEM132EQ6IEE7 984 aa21.84■■□□□ 1.09
CTSD-202ENST00000367196 SIRT1Q96EB6 747 aa21.84■■□□□ 1.09
CTSD-202ENST00000367196 C8orf37Q96NL8 207 aa21.84■■□□□ 1.09
CTSD-202ENST00000367196 C14orf93Q9H972 538 aaKnown RBP21.84■■□□□ 1.09
CTSD-202ENST00000367196 DHX57Q6P158 1386 aaKnown RBP21.84■■□□□ 1.09
CTSD-202ENST00000367196 COL22A1Q8NFW1 1626 aaPredicted RBP21.84■■□□□ 1.09
CTSD-202ENST00000367196 KIF1AQ12756 1690 aa21.83■■□□□ 1.09
CTSD-202ENST00000367196 WAPLQ7Z5K2 1190 aa21.83■■□□□ 1.09
CTSD-202ENST00000367196 FMN2Q9NZ56 1722 aa21.83■■□□□ 1.08
CTSD-202ENST00000367196 PLEKHH1Q9ULM0 1364 aa21.8■■□□□ 1.08
CTSD-202ENST00000367196 PXDNQ92626 1479 aa21.79■■□□□ 1.08
CTSD-202ENST00000367196 ADAMTS2O95450 1211 aa21.79■■□□□ 1.08
CTSD-202ENST00000367196 HRCP23327 699 aa21.79■■□□□ 1.08
CTSD-202ENST00000367196 NGLY1Q96IV0 654 aa21.79■■□□□ 1.08
CTSD-202ENST00000367196 DLC1Q96QB1 1528 aa21.77■■□□□ 1.08
CTSD-202ENST00000367196 FOXO3O43524 673 aa21.76■■□□□ 1.07
CTSD-202ENST00000367196 RBM6P78332 1123 aaKnown RBP21.76■■□□□ 1.07
CTSD-202ENST00000367196 CFAP70Q5T0N1 1121 aa21.76■■□□□ 1.07
CTSD-202ENST00000367196 STAC3Q96MF2 364 aa21.76■■□□□ 1.07
CTSD-202ENST00000367196 NUTM2FA1L443 756 aa21.75■■□□□ 1.07
CTSD-202ENST00000367196 QTRT2Q9H974 415 aaKnown RBP21.75■■□□□ 1.07
CTSD-202ENST00000367196 MARF1Q9Y4F3 1742 aaKnown RBP21.73■■□□□ 1.07
CTSD-202ENST00000367196 USP21Q9UK80 565 aa21.72■■□□□ 1.07
CTSD-202ENST00000367196 ADGRB2O60241 1585 aa21.71■■□□□ 1.07
CTSD-202ENST00000367196 PRAM1Q96QH2 718 aa21.71■■□□□ 1.07
CTSD-202ENST00000367196 POGKQ9P215 609 aa21.71■■□□□ 1.07
CTSD-202ENST00000367196 RGS12O14924 1447 aa21.71■■□□□ 1.07
CTSD-202ENST00000367196 ADGRB1O14514 1584 aa21.7■■□□□ 1.06
CTSD-202ENST00000367196 XPCQ01831 940 aaPredicted RBP21.7■■□□□ 1.06
CTSD-202ENST00000367196 TRPC5Q9UL62 973 aaPredicted RBP21.7■■□□□ 1.06
CTSD-202ENST00000367196 FNBP4Q8N3X1 1017 aaPredicted RBP21.69■■□□□ 1.06
CTSD-202ENST00000367196 UPF1Q92900 1129 aaKnown RBP eCLIP21.69■■□□□ 1.064e-22■□□□□ 9.2
CTSD-202ENST00000367196 EIF3AQ14152 1382 aaKnown RBP21.69■■□□□ 1.06
CTSD-202ENST00000367196 ANKARQ7Z5J8 1434 aa21.69■■□□□ 1.06
CTSD-202ENST00000367196 DCAF11Q8TEB1 546 aa21.68■■□□□ 1.06
CTSD-202ENST00000367196 PHF8Q9UPP1 1060 aa21.68■■□□□ 1.06
CTSD-202ENST00000367196 RGPD8O14715 1765 aaPredicted RBP21.68■■□□□ 1.06
CTSD-202ENST00000367196 SPATA31A3Q5VYP0 1347 aa21.67■■□□□ 1.06
CTSD-202ENST00000367196 PSME1Q06323 249 aa21.67■■□□□ 1.06
CTSD-202ENST00000367196 SAFB2Q14151 953 aaKnown RBP eCLIP21.67■■□□□ 1.06
CTSD-202ENST00000367196 TNS3Q68CZ2 1445 aa21.65■■□□□ 1.06
CTSD-202ENST00000367196 KRT28Q7Z3Y7 464 aa21.65■■□□□ 1.06
CTSD-202ENST00000367196 KDM2AQ9Y2K7 1162 aa21.65■■□□□ 1.06
CTSD-202ENST00000367196 ATRNO75882 1429 aa21.64■■□□□ 1.06
CTSD-202ENST00000367196 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.63■■□□□ 1.05
CTSD-202ENST00000367196 TRAK1Q9UPV9 953 aa21.63■■□□□ 1.05
CTSD-202ENST00000367196 SBNO1A3KN83 1393 aa21.62■■□□□ 1.05
CTSD-202ENST00000367196 ARHGEF10O15013 1369 aa21.62■■□□□ 1.05
CTSD-202ENST00000367196 USP32Q8NFA0 1604 aa21.62■■□□□ 1.05
CTSD-202ENST00000367196 ATAD2Q6PL18 1390 aa21.61■■□□□ 1.05
CTSD-202ENST00000367196 HAP1P54257 671 aaPredicted RBP21.61■■□□□ 1.05
CTSD-202ENST00000367196 BCL9LQ86UU0 1499 aa21.6■■□□□ 1.05
CTSD-202ENST00000367196 TULP4Q9NRJ4 1543 aa21.6■■□□□ 1.05
CTSD-202ENST00000367196 ARHGEF28Q8N1W1 1705 aaKnown RBP21.58■■□□□ 1.04
CTSD-202ENST00000367196 KIAA1210Q9ULL0 1709 aa21.58■■□□□ 1.04
CTSD-202ENST00000367196 GPRASP1Q5JY77 1395 aa21.57■■□□□ 1.04
CTSD-202ENST00000367196 MINK1Q8N4C8 1332 aaPredicted RBP21.56■■□□□ 1.04
CTSD-202ENST00000367196 SLIT2O94813 1529 aa21.56■■□□□ 1.04
CTSD-202ENST00000367196 ITSN1Q15811 1721 aa21.56■■□□□ 1.04
CTSD-202ENST00000367196 ABCA3Q99758 1704 aa21.56■■□□□ 1.04
CTSD-202ENST00000367196 HIRIP3Q9BW71 556 aaPredicted RBP21.56■■□□□ 1.04
CTSD-202ENST00000367196 LMOD2Q6P5Q4 547 aa21.55■■□□□ 1.04
CTSD-202ENST00000367196 UNC5CLQ8IV45 518 aa21.55■■□□□ 1.04
CTSD-202ENST00000367196 WASLO00401 505 aaPredicted RBP21.54■■□□□ 1.04
CTSD-202ENST00000367196 PMFBP1Q8TBY8 1022 aa21.54■■□□□ 1.04
CTSD-202ENST00000367196 GJD4Q96KN9 370 aaPredicted RBP21.54■■□□□ 1.04
CTSD-202ENST00000367196 NWD2Q9ULI1 1742 aa21.54■■□□□ 1.04
CTSD-202ENST00000367196 TRPM3Q9HCF6 1732 aaPredicted RBP21.52■■□□□ 1.04
CTSD-202ENST00000367196 PLCH1Q4KWH8 1693 aa21.51■■□□□ 1.03
CTSD-202ENST00000367196 ALS2Q96Q42 1657 aa21.5■■□□□ 1.03
CTSD-202ENST00000367196 NGDNQ8NEJ9 315 aaKnown RBP21.49■■□□□ 1.03
CTSD-202ENST00000367196 RALGAPBQ86X10 1494 aa21.49■■□□□ 1.03
CTSD-202ENST00000367196 CABLES1Q8TDN4 633 aa21.48■■□□□ 1.03
CTSD-202ENST00000367196 PRR36Q9H6K5 1346 aa21.48■■□□□ 1.03
CTSD-202ENST00000367196 GLI3P10071 1580 aa21.48■■□□□ 1.03
CTSD-202ENST00000367196 ATP7BP35670 1465 aa21.47■■□□□ 1.03
CTSD-202ENST00000367196 CCDC125Q86Z20 511 aa21.46■■□□□ 1.03
CTSD-202ENST00000367196 VPS72Q15906 364 aa21.45■■□□□ 1.02
CTSD-202ENST00000367196 PLEKHG5O94827 1062 aa21.44■■□□□ 1.02
CTSD-202ENST00000367196 COL14A1Q05707 1796 aaKnown RBP21.43■■□□□ 1.02
CTSD-202ENST00000367196 NUDT16Q96DE0 195 aaKnown RBP21.43■■□□□ 1.02
CTSD-202ENST00000367196 CCDC9Q9Y3X0 531 aaKnown RBP21.43■■□□□ 1.02
CTSD-202ENST00000367196 TOPAZ1Q8N9V7 1692 aa21.43■■□□□ 1.02
CTSD-202ENST00000367196 PAK3O75914 559 aaPredicted RBP21.42■■□□□ 1.02
CTSD-202ENST00000367196 CDK19Q9BWU1 502 aa21.4■■□□□ 1.02
CTSD-202ENST00000367196 NRAPQ86VF7 1730 aa21.4■■□□□ 1.02
CTSD-202ENST00000367196 CRYBG1Q9Y4K1 1723 aa21.4■■□□□ 1.02
CTSD-202ENST00000367196 EP400Q96L91 3159 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms