RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 EID1Q9Y6B2 187 aa20.24■□□□□ 0.83
NEK2-201ENST00000366998 ABCC11Q96J66 1382 aa20.24■□□□□ 0.83
NEK2-201ENST00000366998 NPC1L1Q9UHC9 1359 aa20.24■□□□□ 0.83
NEK2-201ENST00000366998 LTKP29376 864 aa20.24■□□□□ 0.83
NEK2-201ENST00000366998 TXNDC2Q86VQ3 553 aa20.24■□□□□ 0.83
NEK2-201ENST00000366998 PLEKHG1Q9ULL1 1385 aa20.23■□□□□ 0.83
NEK2-201ENST00000366998 SLIT1O75093 1534 aa20.23■□□□□ 0.83
NEK2-201ENST00000366998 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
NEK2-201ENST00000366998 NSD3Q9BZ95 1437 aa20.22■□□□□ 0.83
NEK2-201ENST00000366998 THEMISQ8N1K5 641 aaPredicted RBP20.22■□□□□ 0.83
NEK2-201ENST00000366998 ARHGAP23Q9P227 1491 aa20.21■□□□□ 0.83
NEK2-201ENST00000366998 WAPLQ7Z5K2 1190 aa20.21■□□□□ 0.83
NEK2-201ENST00000366998 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
NEK2-201ENST00000366998 PLEKHH1Q9ULM0 1364 aa20.2■□□□□ 0.82
NEK2-201ENST00000366998 ADAMTS13Q76LX8 1427 aa20.2■□□□□ 0.82
NEK2-201ENST00000366998 ATAD2Q6PL18 1390 aa20.19■□□□□ 0.82
NEK2-201ENST00000366998 CPS1P31327 1500 aa20.18■□□□□ 0.82
NEK2-201ENST00000366998 PPP2R1AP30153 589 aa20.18■□□□□ 0.82
NEK2-201ENST00000366998 ANKRD36BQ8N2N9 1353 aa20.18■□□□□ 0.82
NEK2-201ENST00000366998 ZBED9Q6R2W3 1325 aa20.17■□□□□ 0.82
NEK2-201ENST00000366998 USP32Q8NFA0 1604 aa20.17■□□□□ 0.82
NEK2-201ENST00000366998 NINLQ9Y2I6 1382 aa20.17■□□□□ 0.82
NEK2-201ENST00000366998 CDK19Q9BWU1 502 aa20.17■□□□□ 0.82
NEK2-201ENST00000366998 TECPR2O15040 1411 aa20.16■□□□□ 0.82
NEK2-201ENST00000366998 FAM135BQ49AJ0 1406 aa20.15■□□□□ 0.82
NEK2-201ENST00000366998 SLC26A8Q96RN1 970 aa20.14■□□□□ 0.81
NEK2-201ENST00000366998 ZNF142P52746 1687 aaPredicted RBP20.14■□□□□ 0.81
NEK2-201ENST00000366998 MED14O60244 1454 aa20.13■□□□□ 0.81
NEK2-201ENST00000366998 SIRT1Q96EB6 747 aa20.12■□□□□ 0.81
NEK2-201ENST00000366998 CGNL1Q0VF96 1302 aa20.12■□□□□ 0.81
NEK2-201ENST00000366998 A0A1W2PP64 1363 aa20.11■□□□□ 0.81
NEK2-201ENST00000366998 SETD1BQ9UPS6 1966 aaKnown RBP20.11■□□□□ 0.81
NEK2-201ENST00000366998 DIP2AQ14689 1571 aa20.11■□□□□ 0.81
NEK2-201ENST00000366998 MORC1Q86VD1 984 aa20.1■□□□□ 0.81
NEK2-201ENST00000366998 TERF2IPQ9NYB0 399 aa20.1■□□□□ 0.81
NEK2-201ENST00000366998 ROBO2Q9HCK4 1378 aa20.1■□□□□ 0.81
NEK2-201ENST00000366998 SENP3-EIF4A1A0A087X0R7 540 aa20.08■□□□□ 0.81
NEK2-201ENST00000366998 WASLO00401 505 aaPredicted RBP20.08■□□□□ 0.81
NEK2-201ENST00000366998 TBX22Q9Y458 520 aa20.08■□□□□ 0.81
NEK2-201ENST00000366998 PTPRUQ92729 1446 aa20.08■□□□□ 0.8
NEK2-201ENST00000366998 HDGFL2Q7Z4V5 671 aaPredicted RBP20.07■□□□□ 0.8
NEK2-201ENST00000366998 CD163L1Q9NR16 1453 aa20.07■□□□□ 0.8
NEK2-201ENST00000366998 CABP1Q9NZU7 370 aa20.07■□□□□ 0.8
NEK2-201ENST00000366998 NSD2O96028 1365 aa20.06■□□□□ 0.8
NEK2-201ENST00000366998 WDR43Q15061 677 aaKnown RBP eCLIP20.06■□□□□ 0.8
NEK2-201ENST00000366998 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.05■□□□□ 0.8
NEK2-201ENST00000366998 TNNT2P45379 298 aaPredicted RBP20.05■□□□□ 0.8
NEK2-201ENST00000366998 AMOTL2Q9Y2J4 779 aa20.04■□□□□ 0.8
NEK2-201ENST00000366998 BLMP54132 1417 aaPredicted RBP20.04■□□□□ 0.8
NEK2-201ENST00000366998 ANKRD26Q9UPS8 1709 aa20.03■□□□□ 0.8
NEK2-201ENST00000366998 INSRP06213 1382 aa20.03■□□□□ 0.8
NEK2-201ENST00000366998 ATP7BP35670 1465 aa20.03■□□□□ 0.8
NEK2-201ENST00000366998 ADGRB2O60241 1585 aa20.03■□□□□ 0.8
NEK2-201ENST00000366998 KIF20BQ96Q89 1820 aa20.03■□□□□ 0.8
NEK2-201ENST00000366998 ANKLE2Q86XL3 938 aa20.03■□□□□ 0.8
NEK2-201ENST00000366998 PPIP5K1Q6PFW1 1433 aa20.02■□□□□ 0.79
NEK2-201ENST00000366998 XRN1Q8IZH2 1706 aaKnown RBP20.01■□□□□ 0.79
NEK2-201ENST00000366998 NUDT16Q96DE0 195 aaKnown RBP20.01■□□□□ 0.79
NEK2-201ENST00000366998 ADAMTS8Q9UP79 889 aa20.01■□□□□ 0.79
NEK2-201ENST00000366998 PTCH1Q13635 1447 aa20■□□□□ 0.79
NEK2-201ENST00000366998 NEFLP07196 543 aa20■□□□□ 0.79
NEK2-201ENST00000366998 ITSN1Q15811 1721 aa19.99■□□□□ 0.79
NEK2-201ENST00000366998 GGNBP2Q9H3C7 697 aa19.99■□□□□ 0.79
NEK2-201ENST00000366998 SALL2Q9Y467 1007 aaPredicted RBP19.99■□□□□ 0.79
NEK2-201ENST00000366998 POLR3AO14802 1390 aaPredicted RBP19.98■□□□□ 0.79
NEK2-201ENST00000366998 CDC42BPGQ6DT37 1551 aa19.97■□□□□ 0.79
NEK2-201ENST00000366998 CCDC61Q9Y6R9 512 aa19.96■□□□□ 0.79
NEK2-201ENST00000366998 PIK3R4Q99570 1358 aa19.96■□□□□ 0.79
NEK2-201ENST00000366998 SUPT16HQ9Y5B9 1047 aaKnown RBP19.96■□□□□ 0.79
NEK2-201ENST00000366998 SMG6Q86US8 1419 aaKnown RBP19.96■□□□□ 0.79
NEK2-201ENST00000366998 AKAP12Q02952 1782 aa19.95■□□□□ 0.78
NEK2-201ENST00000366998 FYB1O15117 783 aa19.95■□□□□ 0.78
NEK2-201ENST00000366998 NCKAP5LQ9HCH0 1330 aa19.95■□□□□ 0.78
NEK2-201ENST00000366998 MON2Q7Z3U7 1717 aa19.95■□□□□ 0.78
NEK2-201ENST00000366998 FKBP8Q14318 412 aa19.94■□□□□ 0.78
NEK2-201ENST00000366998 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.94■□□□□ 0.78
NEK2-201ENST00000366998 PRR36Q9H6K5 1346 aa19.94■□□□□ 0.78
NEK2-201ENST00000366998 TOPAZ1Q8N9V7 1692 aa19.94■□□□□ 0.78
NEK2-201ENST00000366998 CHD2O14647 1828 aaKnown RBP19.94■□□□□ 0.78
NEK2-201ENST00000366998 SHPRHQ149N8 1683 aa19.94■□□□□ 0.78
NEK2-201ENST00000366998 CPSF1Q10570 1443 aaKnown RBP19.94■□□□□ 0.78
NEK2-201ENST00000366998 MTHFSP49914 203 aa19.93■□□□□ 0.78
NEK2-201ENST00000366998 CFAP53Q96M91 514 aa19.93■□□□□ 0.78
NEK2-201ENST00000366998 NUDCQ9Y266 331 aa19.93■□□□□ 0.78
NEK2-201ENST00000366998 EDC4Q6P2E9 1401 aaKnown RBP19.93■□□□□ 0.78
NEK2-201ENST00000366998 NUTM2FA1L443 756 aa19.92■□□□□ 0.78
NEK2-201ENST00000366998 KCNA6P17658 529 aa19.92■□□□□ 0.78
NEK2-201ENST00000366998 NPHP4O75161 1426 aaPredicted RBP19.9■□□□□ 0.78
NEK2-201ENST00000366998 CCDC146Q8IYE0 955 aa19.89■□□□□ 0.77
NEK2-201ENST00000366998 RGPD8O14715 1765 aaPredicted RBP19.88■□□□□ 0.77
NEK2-201ENST00000366998 PDE3BQ13370 1112 aa19.87■□□□□ 0.77
NEK2-201ENST00000366998 ZNF692Q9BU19 519 aaPredicted RBP19.87■□□□□ 0.77
NEK2-201ENST00000366998 NKTRP30414 1462 aaKnown RBP19.86■□□□□ 0.77
NEK2-201ENST00000366998 ACEP12821 1306 aa19.85■□□□□ 0.77
NEK2-201ENST00000366998 NALCNQ8IZF0 1738 aa19.84■□□□□ 0.77
NEK2-201ENST00000366998 NME9Q86XW9 330 aa19.84■□□□□ 0.77
NEK2-201ENST00000366998 NRKQ7Z2Y5 1582 aa19.84■□□□□ 0.77
NEK2-201ENST00000366998 FMN2Q9NZ56 1722 aa19.84■□□□□ 0.77
NEK2-201ENST00000366998 PLEKHG3A1L390 1219 aa19.84■□□□□ 0.77
NEK2-201ENST00000366998 MAP2P11137 1827 aaKnown RBP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms