RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 ATP7BP35670 1465 aa13.13□□□□□ -0.31
CNIH4-202ENST00000366857 CFAP70Q5T0N1 1121 aa13.12□□□□□ -0.31
CNIH4-202ENST00000366857 SIRT1Q96EB6 747 aa13.11□□□□□ -0.31
CNIH4-202ENST00000366857 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
CNIH4-202ENST00000366857 METP08581 1390 aa13.1□□□□□ -0.31
CNIH4-202ENST00000366857 VIRMAQ69YN4 1812 aaKnown RBP13.1□□□□□ -0.31
CNIH4-202ENST00000366857 DLG5Q8TDM6 1919 aa13.1□□□□□ -0.31
CNIH4-202ENST00000366857 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
CNIH4-202ENST00000366857 TNRQ92752 1358 aa13.09□□□□□ -0.31
CNIH4-202ENST00000366857 CARD14Q9BXL6 1004 aa13.09□□□□□ -0.31
CNIH4-202ENST00000366857 BRD4O60885 1362 aaPredicted RBP13.08□□□□□ -0.31
CNIH4-202ENST00000366857 ALS2Q96Q42 1657 aa13.08□□□□□ -0.32
CNIH4-202ENST00000366857 GGT6Q6P531 493 aa13.07□□□□□ -0.32
CNIH4-202ENST00000366857 MST1RQ04912 1400 aa13.07□□□□□ -0.32
CNIH4-202ENST00000366857 EIF3AQ14152 1382 aaKnown RBP13.07□□□□□ -0.32
CNIH4-202ENST00000366857 LMO7Q8WWI1 1683 aa13.07□□□□□ -0.32
CNIH4-202ENST00000366857 RNF123Q5XPI4 1314 aa13.05□□□□□ -0.32
CNIH4-202ENST00000366857 RGL3Q3MIN7 710 aa13.05□□□□□ -0.32
CNIH4-202ENST00000366857 PNISRQ8TF01 805 aaKnown RBP13.05□□□□□ -0.32
CNIH4-202ENST00000366857 NINLQ9Y2I6 1382 aa13.05□□□□□ -0.32
CNIH4-202ENST00000366857 LMTK3Q96Q04 1460 aa13.04□□□□□ -0.32
CNIH4-202ENST00000366857 LRRC37A3O60309 1634 aa13.04□□□□□ -0.32
CNIH4-202ENST00000366857 KDM2AQ9Y2K7 1162 aa13.04□□□□□ -0.32
CNIH4-202ENST00000366857 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
CNIH4-202ENST00000366857 ADAMTS7Q9UKP4 1686 aa13.03□□□□□ -0.32
CNIH4-202ENST00000366857 ABCA3Q99758 1704 aa13.02□□□□□ -0.32
CNIH4-202ENST00000366857 ANKRD36BQ8N2N9 1353 aa13.02□□□□□ -0.33
CNIH4-202ENST00000366857 PNPLA6Q8IY17 1366 aa13.02□□□□□ -0.33
CNIH4-202ENST00000366857 N4BP2Q86UW6 1770 aaPredicted RBP13.01□□□□□ -0.33
CNIH4-202ENST00000366857 ZNF521Q96K83 1311 aa13.01□□□□□ -0.33
CNIH4-202ENST00000366857 LTN1O94822 1766 aa13.01□□□□□ -0.33
CNIH4-202ENST00000366857 COL18A1P39060 1754 aa13□□□□□ -0.33
CNIH4-202ENST00000366857 ROBO2Q9HCK4 1378 aa12.99□□□□□ -0.33
CNIH4-202ENST00000366857 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
CNIH4-202ENST00000366857 PIK3R4Q99570 1358 aa12.98□□□□□ -0.33
CNIH4-202ENST00000366857 MYBBP1AQ9BQG0 1328 aaKnown RBP12.98□□□□□ -0.33
CNIH4-202ENST00000366857 SIPA1L3O60292 1781 aaPredicted RBP12.98□□□□□ -0.33
CNIH4-202ENST00000366857 LTKP29376 864 aa12.97□□□□□ -0.33
CNIH4-202ENST00000366857 POLR3AO14802 1390 aaPredicted RBP12.96□□□□□ -0.33
CNIH4-202ENST00000366857 CENPJQ9HC77 1338 aaPredicted RBP12.96□□□□□ -0.33
CNIH4-202ENST00000366857 KIF1AQ12756 1690 aa12.96□□□□□ -0.33
CNIH4-202ENST00000366857 A0A1W2PP64 1363 aa12.96□□□□□ -0.33
CNIH4-202ENST00000366857 RALBP1Q15311 655 aa12.96□□□□□ -0.33
CNIH4-202ENST00000366857 NSD2O96028 1365 aa12.95□□□□□ -0.34
CNIH4-202ENST00000366857 TMF1P82094 1093 aa12.94□□□□□ -0.34
CNIH4-202ENST00000366857 NFAT5O94916 1531 aa12.94□□□□□ -0.34
CNIH4-202ENST00000366857 PHF23Q9BUL5 403 aaPredicted RBP12.94□□□□□ -0.34
CNIH4-202ENST00000366857 ZBED9Q6R2W3 1325 aa12.94□□□□□ -0.34
CNIH4-202ENST00000366857 OVOS2A0A0J9YW53 1432 aa12.94□□□□□ -0.34
CNIH4-202ENST00000366857 OVOS2Q6IE36 1432 aa12.94□□□□□ -0.34
CNIH4-202ENST00000366857 PANK3Q9H999 370 aa12.94□□□□□ -0.34
CNIH4-202ENST00000366857 RGPD2P0DJD1 1756 aa12.93□□□□□ -0.34
CNIH4-202ENST00000366857 ANP32CO43423 234 aa12.92□□□□□ -0.34
CNIH4-202ENST00000366857 SLIT3O75094 1523 aa12.92□□□□□ -0.34
CNIH4-202ENST00000366857 TMEM132EQ6IEE7 984 aa12.91□□□□□ -0.34
CNIH4-202ENST00000366857 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
CNIH4-202ENST00000366857 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
CNIH4-202ENST00000366857 FAM208AQ9UK61 1670 aaKnown RBP12.9□□□□□ -0.34
CNIH4-202ENST00000366857 NSD3Q9BZ95 1437 aa12.9□□□□□ -0.34
CNIH4-202ENST00000366857 SHANK3Q9BYB0 1731 aa12.9□□□□□ -0.34
CNIH4-202ENST00000366857 NHSL1Q5SYE7 1610 aa12.9□□□□□ -0.35
CNIH4-202ENST00000366857 NCAPD2Q15021 1401 aa12.89□□□□□ -0.35
CNIH4-202ENST00000366857 ANKARQ7Z5J8 1434 aa12.89□□□□□ -0.35
CNIH4-202ENST00000366857 KDM4FA0A1W2PPD8 638 aa12.89□□□□□ -0.35
CNIH4-202ENST00000366857 MED1Q15648 1581 aaPredicted RBP12.89□□□□□ -0.35
CNIH4-202ENST00000366857 LTBP4Q8N2S1 1624 aa12.89□□□□□ -0.35
CNIH4-202ENST00000366857 RGPD5Q99666 1765 aa12.89□□□□□ -0.35
CNIH4-202ENST00000366857 PRR36Q9H6K5 1346 aa12.89□□□□□ -0.35
CNIH4-202ENST00000366857 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
CNIH4-202ENST00000366857 USP31Q70CQ4 1352 aa12.88□□□□□ -0.35
CNIH4-202ENST00000366857 CDK12Q9NYV4 1490 aaPredicted RBP12.87□□□□□ -0.35
CNIH4-202ENST00000366857 WNK3Q9BYP7 1800 aa12.87□□□□□ -0.35
CNIH4-202ENST00000366857 EDC4Q6P2E9 1401 aaKnown RBP12.87□□□□□ -0.35
CNIH4-202ENST00000366857 PPP2R1AP30153 589 aa12.87□□□□□ -0.35
CNIH4-202ENST00000366857 ATAD2Q6PL18 1390 aa12.86□□□□□ -0.35
CNIH4-202ENST00000366857 ABCC6O95255 1503 aa12.86□□□□□ -0.35
CNIH4-202ENST00000366857 AATKQ6ZMQ8 1374 aa12.85□□□□□ -0.35
CNIH4-202ENST00000366857 ZNF326Q5BKZ1 582 aaKnown RBP12.85□□□□□ -0.35
CNIH4-202ENST00000366857 TBX22Q9Y458 520 aa12.85□□□□□ -0.35
CNIH4-202ENST00000366857 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.84□□□□□ -0.35
CNIH4-202ENST00000366857 KDM3BQ7LBC6 1761 aa12.83□□□□□ -0.36
CNIH4-202ENST00000366857 NLRP13Q86W25 1043 aa12.83□□□□□ -0.36
CNIH4-202ENST00000366857 GLI3P10071 1580 aa12.82□□□□□ -0.36
CNIH4-202ENST00000366857 USP6P35125 1406 aa12.82□□□□□ -0.36
CNIH4-202ENST00000366857 NCOA3Q9Y6Q9 1424 aa12.81□□□□□ -0.36
CNIH4-202ENST00000366857 CEBPAP49715 358 aaPredicted RBP12.81□□□□□ -0.36
CNIH4-202ENST00000366857 TRAK1Q9UPV9 953 aa12.81□□□□□ -0.36
CNIH4-202ENST00000366857 COL22A1Q8NFW1 1626 aaPredicted RBP12.81□□□□□ -0.36
CNIH4-202ENST00000366857 PKD1L3Q7Z443 1732 aa12.81□□□□□ -0.36
CNIH4-202ENST00000366857 PPIP5K1Q6PFW1 1433 aa12.81□□□□□ -0.36
CNIH4-202ENST00000366857 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
CNIH4-202ENST00000366857 PRAM1Q96QH2 718 aa12.8□□□□□ -0.36
CNIH4-202ENST00000366857 PLEKHF1Q96S99 279 aa12.8□□□□□ -0.36
CNIH4-202ENST00000366857 PARP4Q9UKK3 1724 aaKnown RBP12.8□□□□□ -0.36
CNIH4-202ENST00000366857 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
CNIH4-202ENST00000366857 SLC12A5Q9H2X9 1139 aa12.79□□□□□ -0.36
CNIH4-202ENST00000366857 ADGRL3Q9HAR2 1447 aa12.79□□□□□ -0.36
CNIH4-202ENST00000366857 PLEKHG3A1L390 1219 aa12.79□□□□□ -0.36
CNIH4-202ENST00000366857 TUBGCP6Q96RT7 1819 aa12.78□□□□□ -0.36
CNIH4-202ENST00000366857 NUTM2DQ5VT03 806 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms