RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 MBD3O95983 291 aa14.63□□□□□ -0.07
CDC42BPA-203ENST00000366766 TPM2P07951 284 aa14.63□□□□□ -0.07
CDC42BPA-203ENST00000366766 WDR63Q8IWG1 891 aa14.63□□□□□ -0.07
CDC42BPA-203ENST00000366766 CAMSAP2Q08AD1 1489 aa14.63□□□□□ -0.07
CDC42BPA-203ENST00000366766 FAM135AQ9P2D6 1515 aa14.63□□□□□ -0.07
CDC42BPA-203ENST00000366766 HIP1O00291 1037 aa14.63□□□□□ -0.07
CDC42BPA-203ENST00000366766 LETM1O95202 739 aaPredicted RBP14.63□□□□□ -0.07
CDC42BPA-203ENST00000366766 IFIT2P09913 472 aaKnown RBP14.63□□□□□ -0.07
CDC42BPA-203ENST00000366766 RASSF8Q8NHQ8 419 aa14.63□□□□□ -0.07
CDC42BPA-203ENST00000366766 ANO8Q9HCE9 1232 aaPredicted RBP14.63□□□□□ -0.07
CDC42BPA-203ENST00000366766 GNAI3P08754 354 aa14.62□□□□□ -0.07
CDC42BPA-203ENST00000366766 GCC1Q96CN9 775 aa14.62□□□□□ -0.07
CDC42BPA-203ENST00000366766 ATAD2Q6PL18 1390 aa14.62□□□□□ -0.07
CDC42BPA-203ENST00000366766 BCL2L13Q9BXK5 485 aa14.61□□□□□ -0.07
CDC42BPA-203ENST00000366766 TAOK2Q9UL54 1235 aa14.61□□□□□ -0.07
CDC42BPA-203ENST00000366766 SNAPC4Q5SXM2 1469 aa14.61□□□□□ -0.07
CDC42BPA-203ENST00000366766 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.61□□□□□ -0.07
CDC42BPA-203ENST00000366766 MRE11P49959 708 aa14.61□□□□□ -0.07
CDC42BPA-203ENST00000366766 RABEP1Q15276 862 aa14.61□□□□□ -0.07
CDC42BPA-203ENST00000366766 PSMA5P28066 241 aa14.6□□□□□ -0.07
CDC42BPA-203ENST00000366766 G3BP1Q13283 466 aaKnown RBP eCLIP14.6□□□□□ -0.07
CDC42BPA-203ENST00000366766 AMOTL1Q8IY63 956 aa14.6□□□□□ -0.07
CDC42BPA-203ENST00000366766 MAP7D2Q96T17 732 aa14.6□□□□□ -0.07
CDC42BPA-203ENST00000366766 GAS2L2Q8NHY3 880 aa14.6□□□□□ -0.07
CDC42BPA-203ENST00000366766 NAT10Q9H0A0 1025 aaKnown RBP14.6□□□□□ -0.07
CDC42BPA-203ENST00000366766 TRIM29Q14134 588 aa14.6□□□□□ -0.07
CDC42BPA-203ENST00000366766 EIF2AK4Q9P2K8 1649 aaKnown RBP14.59□□□□□ -0.07
CDC42BPA-203ENST00000366766 PPP2R1AP30153 589 aa14.59□□□□□ -0.07
CDC42BPA-203ENST00000366766 IL27Q8NEV9 243 aa14.59□□□□□ -0.07
CDC42BPA-203ENST00000366766 PNISRQ8TF01 805 aaKnown RBP14.59□□□□□ -0.07
CDC42BPA-203ENST00000366766 TRDNQ13061 729 aa14.59□□□□□ -0.07
CDC42BPA-203ENST00000366766 IPO7O95373 1038 aaKnown RBP14.59□□□□□ -0.07
CDC42BPA-203ENST00000366766 FKBP5Q13451 457 aaPredicted RBP14.59□□□□□ -0.07
CDC42BPA-203ENST00000366766 ZNF330Q9Y3S2 320 aaPredicted RBP14.58□□□□□ -0.07
CDC42BPA-203ENST00000366766 CPLX1O14810 134 aa14.57□□□□□ -0.08
CDC42BPA-203ENST00000366766 ADAMTS8Q9UP79 889 aa14.57□□□□□ -0.08
CDC42BPA-203ENST00000366766 ERC1Q8IUD2 1116 aa14.57□□□□□ -0.08
CDC42BPA-203ENST00000366766 CCDC47Q96A33 483 aaKnown RBP14.56□□□□□ -0.08
CDC42BPA-203ENST00000366766 TPD52L1Q16890 204 aaPredicted RBP14.56□□□□□ -0.08
CDC42BPA-203ENST00000366766 SMC3Q9UQE7 1217 aa14.56□□□□□ -0.08
CDC42BPA-203ENST00000366766 RPRD2Q5VT52 1461 aaKnown RBP14.56□□□□□ -0.08
CDC42BPA-203ENST00000366766 NUTM2DQ5VT03 806 aaPredicted RBP14.56□□□□□ -0.08
CDC42BPA-203ENST00000366766 TCP11L2Q8N4U5 519 aa14.56□□□□□ -0.08
CDC42BPA-203ENST00000366766 CWC22Q9HCG8 908 aaKnown RBP14.56□□□□□ -0.08
CDC42BPA-203ENST00000366766 CCDC30Q5VVM6 783 aa14.55□□□□□ -0.08
CDC42BPA-203ENST00000366766 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
CDC42BPA-203ENST00000366766 CIZ1Q9ULV3 898 aaPredicted RBP14.55□□□□□ -0.08
CDC42BPA-203ENST00000366766 TSPYL4Q9UJ04 414 aa14.55□□□□□ -0.08
CDC42BPA-203ENST00000366766 ABCC11Q96J66 1382 aa14.55□□□□□ -0.08
CDC42BPA-203ENST00000366766 GTF2E1P29083 439 aaPredicted RBP14.55□□□□□ -0.08
CDC42BPA-203ENST00000366766 CNTROBQ8N137 903 aa14.55□□□□□ -0.08
CDC42BPA-203ENST00000366766 MTHFSP49914 203 aa14.55□□□□□ -0.08
CDC42BPA-203ENST00000366766 CDK13Q14004 1512 aaKnown RBP14.55□□□□□ -0.08
CDC42BPA-203ENST00000366766 LTV1Q96GA3 475 aaPredicted RBP14.55□□□□□ -0.08
CDC42BPA-203ENST00000366766 ANO2Q9NQ90 1003 aa14.55□□□□□ -0.08
CDC42BPA-203ENST00000366766 NOL10Q9BSC4 688 aaKnown RBP14.54□□□□□ -0.08
CDC42BPA-203ENST00000366766 SRCIN1Q9C0H9 1055 aa14.54□□□□□ -0.08
CDC42BPA-203ENST00000366766 UBTFL1P0CB47 393 aaPredicted RBP14.54□□□□□ -0.08
CDC42BPA-203ENST00000366766 GPRASP1Q5JY77 1395 aa14.54□□□□□ -0.08
CDC42BPA-203ENST00000366766 PSME1Q06323 249 aa14.54□□□□□ -0.08
CDC42BPA-203ENST00000366766 CCDC73Q6ZRK6 1079 aa14.54□□□□□ -0.08
CDC42BPA-203ENST00000366766 FRAT2O75474 233 aaPredicted RBP14.54□□□□□ -0.08
CDC42BPA-203ENST00000366766 CEP89Q96ST8 783 aa14.54□□□□□ -0.08
CDC42BPA-203ENST00000366766 CCT4P50991 539 aaKnown RBP14.53□□□□□ -0.08
CDC42BPA-203ENST00000366766 CCDC39Q9UFE4 941 aa14.53□□□□□ -0.08
CDC42BPA-203ENST00000366766 CLSTN1O94985 981 aa14.53□□□□□ -0.08
CDC42BPA-203ENST00000366766 SAFBQ15424 915 aaKnown RBP eCLIP14.53□□□□□ -0.08
CDC42BPA-203ENST00000366766 FAM43AQ8N2R8 423 aa14.53□□□□□ -0.08
CDC42BPA-203ENST00000366766 TNNT3P45378 269 aaPredicted RBP14.53□□□□□ -0.08
CDC42BPA-203ENST00000366766 NFKBIBQ15653 356 aa14.53□□□□□ -0.08
CDC42BPA-203ENST00000366766 NOL8Q76FK4 1167 aaKnown RBP14.53□□□□□ -0.08
CDC42BPA-203ENST00000366766 RAPGEF6Q8TEU7 1601 aa14.52□□□□□ -0.08
CDC42BPA-203ENST00000366766 NSD2O96028 1365 aa14.52□□□□□ -0.08
CDC42BPA-203ENST00000366766 DHX16O60231 1041 aaKnown RBP14.52□□□□□ -0.08
CDC42BPA-203ENST00000366766 TULP1O00294 542 aaPredicted RBP14.52□□□□□ -0.09
CDC42BPA-203ENST00000366766 NASPP49321 788 aaPredicted RBP14.52□□□□□ -0.09
CDC42BPA-203ENST00000366766 TOMM22Q9NS69 142 aa14.51□□□□□ -0.09
CDC42BPA-203ENST00000366766 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
CDC42BPA-203ENST00000366766 NCOA1Q15788 1441 aa14.51□□□□□ -0.09
CDC42BPA-203ENST00000366766 HMGN5P82970 282 aaKnown RBP14.51□□□□□ -0.09
CDC42BPA-203ENST00000366766 TEX35Q5T0J7 233 aa14.51□□□□□ -0.09
CDC42BPA-203ENST00000366766 SASS6Q6UVJ0 657 aa14.51□□□□□ -0.09
CDC42BPA-203ENST00000366766 ELL2O00472 640 aaPredicted RBP14.51□□□□□ -0.09
CDC42BPA-203ENST00000366766 CCP110O43303 1012 aa14.51□□□□□ -0.09
CDC42BPA-203ENST00000366766 A0A0U1RQG5 324 aaPredicted RBP14.51□□□□□ -0.09
CDC42BPA-203ENST00000366766 NKTRP30414 1462 aaKnown RBP14.51□□□□□ -0.09
CDC42BPA-203ENST00000366766 CLASRPQ8N2M8 674 aaKnown RBP14.51□□□□□ -0.09
CDC42BPA-203ENST00000366766 MCTP1Q6DN14 999 aa14.51□□□□□ -0.09
CDC42BPA-203ENST00000366766 PANK1Q8TE04 598 aa14.5□□□□□ -0.09
CDC42BPA-203ENST00000366766 GRIN2AQ12879 1464 aa14.5□□□□□ -0.09
CDC42BPA-203ENST00000366766 BACH2Q9BYV9 841 aa14.5□□□□□ -0.09
CDC42BPA-203ENST00000366766 LNPKQ9C0E8 428 aa14.5□□□□□ -0.09
CDC42BPA-203ENST00000366766 ANKRD1Q15327 319 aa14.5□□□□□ -0.09
CDC42BPA-203ENST00000366766 ERICH2A1L162 156 aa14.5□□□□□ -0.09
CDC42BPA-203ENST00000366766 ARGLU1Q9NWB6 273 aaPredicted RBP14.5□□□□□ -0.09
CDC42BPA-203ENST00000366766 BICD2Q8TD16 824 aa14.5□□□□□ -0.09
CDC42BPA-203ENST00000366766 RAPGEF4Q8WZA2 1011 aa14.5□□□□□ -0.09
CDC42BPA-203ENST00000366766 RALYLQ86SE5 291 aaKnown RBP14.49□□□□□ -0.09
CDC42BPA-203ENST00000366766 DHX29Q7Z478 1369 aaKnown RBP14.49□□□□□ -0.09
CDC42BPA-203ENST00000366766 XBP1P17861 261 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 273.6 ms