RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 IGHDP01880 384 aa11.55□□□□□ -0.56
SMYD3-201ENST00000366516 CLCN1P35523 988 aa11.55□□□□□ -0.56
SMYD3-201ENST00000366516 MRE11P49959 708 aa11.55□□□□□ -0.56
SMYD3-201ENST00000366516 SLKQ9H2G2 1235 aaPredicted RBP11.55□□□□□ -0.56
SMYD3-201ENST00000366516 PNNQ9H307 717 aaKnown RBP11.55□□□□□ -0.56
SMYD3-201ENST00000366516 FSD2A1L4K1 749 aa11.54□□□□□ -0.56
SMYD3-201ENST00000366516 CHMP5Q9NZZ3 219 aa11.54□□□□□ -0.56
SMYD3-201ENST00000366516 CT47B1P0C2W7 299 aaPredicted RBP11.53□□□□□ -0.56
SMYD3-201ENST00000366516 KANK1Q14678 1352 aa11.53□□□□□ -0.56
SMYD3-201ENST00000366516 SBNO2Q9Y2G9 1366 aa11.53□□□□□ -0.56
SMYD3-201ENST00000366516 PTPRTO14522 1441 aa11.53□□□□□ -0.56
SMYD3-201ENST00000366516 WDR63Q8IWG1 891 aa11.53□□□□□ -0.56
SMYD3-201ENST00000366516 CCDC146Q8IYE0 955 aa11.53□□□□□ -0.56
SMYD3-201ENST00000366516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.52□□□□□ -0.56
SMYD3-201ENST00000366516 MYOM2P54296 1465 aa11.52□□□□□ -0.57
SMYD3-201ENST00000366516 MCM4P33991 863 aa11.52□□□□□ -0.57
SMYD3-201ENST00000366516 TBC1D2Q9BYX2 928 aa11.52□□□□□ -0.57
SMYD3-201ENST00000366516 MYO3AQ8NEV4 1616 aa11.51□□□□□ -0.57
SMYD3-201ENST00000366516 RRP9O43818 475 aaKnown RBP11.51□□□□□ -0.57
SMYD3-201ENST00000366516 CCDC27Q2M243 656 aa11.51□□□□□ -0.57
SMYD3-201ENST00000366516 WWC1Q8IX03 1113 aa11.51□□□□□ -0.57
SMYD3-201ENST00000366516 COG6Q9Y2V7 657 aa11.51□□□□□ -0.57
SMYD3-201ENST00000366516 TET3O43151 1660 aa11.51□□□□□ -0.57
SMYD3-201ENST00000366516 ADGRL1O94910 1474 aa11.5□□□□□ -0.57
SMYD3-201ENST00000366516 RTEL1-TNFRSF6BF6WH68 1400 aa11.5□□□□□ -0.57
SMYD3-201ENST00000366516 RUNDC1Q96C34 613 aa11.5□□□□□ -0.57
SMYD3-201ENST00000366516 MYH16Q9H6N6 1097 aa11.5□□□□□ -0.57
SMYD3-201ENST00000366516 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
SMYD3-201ENST00000366516 RRAGDQ9NQL2 400 aaPredicted RBP11.5□□□□□ -0.57
SMYD3-201ENST00000366516 IQSEC2Q5JU85 1478 aa11.5□□□□□ -0.57
SMYD3-201ENST00000366516 DEPDC5O75140 1603 aa11.49□□□□□ -0.57
SMYD3-201ENST00000366516 USP32Q8NFA0 1604 aa11.49□□□□□ -0.57
SMYD3-201ENST00000366516 RARSP54136 660 aaKnown RBP11.49□□□□□ -0.57
SMYD3-201ENST00000366516 HSCBQ8IWL3 235 aa11.49□□□□□ -0.57
SMYD3-201ENST00000366516 ERVK-7P63135 1459 aa11.49□□□□□ -0.57
SMYD3-201ENST00000366516 SEC24BO95487 1268 aa11.49□□□□□ -0.57
SMYD3-201ENST00000366516 HSP90AA1P07900 732 aaKnown RBP11.49□□□□□ -0.57
SMYD3-201ENST00000366516 XRCC6P12956 609 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMYD3-201ENST00000366516 PANK1Q8TE04 598 aa11.49□□□□□ -0.57
SMYD3-201ENST00000366516 CLTCL1P53675 1640 aa11.48□□□□□ -0.57
SMYD3-201ENST00000366516 MAP3K4Q9Y6R4 1608 aa11.48□□□□□ -0.57
SMYD3-201ENST00000366516 ABCC1P33527 1531 aa11.48□□□□□ -0.57
SMYD3-201ENST00000366516 SKOR2Q2VWA4 1001 aaPredicted RBP11.48□□□□□ -0.57
SMYD3-201ENST00000366516 NAP1L5Q96NT1 182 aaPredicted RBP11.48□□□□□ -0.57
SMYD3-201ENST00000366516 CIZ1Q9ULV3 898 aaPredicted RBP11.48□□□□□ -0.57
SMYD3-201ENST00000366516 TRAK2O60296 914 aa11.47□□□□□ -0.57
SMYD3-201ENST00000366516 CFAP53Q96M91 514 aa11.47□□□□□ -0.57
SMYD3-201ENST00000366516 C22orf23Q9BZE7 217 aa11.47□□□□□ -0.57
SMYD3-201ENST00000366516 PDZRN3Q9UPQ7 1066 aa11.47□□□□□ -0.57
SMYD3-201ENST00000366516 SHPRHQ149N8 1683 aa11.47□□□□□ -0.57
SMYD3-201ENST00000366516 ILDR1Q86SU0 546 aaPredicted RBP11.46□□□□□ -0.57
SMYD3-201ENST00000366516 GBP4Q96PP9 640 aa11.46□□□□□ -0.57
SMYD3-201ENST00000366516 PLCH2O75038 1416 aa11.46□□□□□ -0.57
SMYD3-201ENST00000366516 ARAP3Q8WWN8 1544 aa11.46□□□□□ -0.57
SMYD3-201ENST00000366516 MVPQ14764 893 aaKnown RBP11.46□□□□□ -0.58
SMYD3-201ENST00000366516 TRIM44Q96DX7 344 aaPredicted RBP11.46□□□□□ -0.58
SMYD3-201ENST00000366516 SETBP1Q9Y6X0 1596 aa11.46□□□□□ -0.58
SMYD3-201ENST00000366516 HSP90AA2PQ14568 343 aaPredicted RBP11.45□□□□□ -0.58
SMYD3-201ENST00000366516 FTSJ3Q8IY81 847 aaKnown RBP11.45□□□□□ -0.58
SMYD3-201ENST00000366516 RNF39Q9H2S5 420 aa11.45□□□□□ -0.58
SMYD3-201ENST00000366516 NSD2O96028 1365 aa11.45□□□□□ -0.58
SMYD3-201ENST00000366516 NCOA3Q9Y6Q9 1424 aa11.45□□□□□ -0.58
SMYD3-201ENST00000366516 HDAC1Q13547 482 aaPredicted RBP11.44□□□□□ -0.58
SMYD3-201ENST00000366516 ERCC6L2Q5T890 1561 aa11.44□□□□□ -0.58
SMYD3-201ENST00000366516 EFCAB2Q5VUJ9 269 aa11.44□□□□□ -0.58
SMYD3-201ENST00000366516 ZKSCAN2Q63HK3 967 aa11.44□□□□□ -0.58
SMYD3-201ENST00000366516 GRPEL1Q9HAV7 217 aa11.44□□□□□ -0.58
SMYD3-201ENST00000366516 SNX21Q969T3 373 aa11.44□□□□□ -0.58
SMYD3-201ENST00000366516 ABCA6Q8N139 1617 aa11.43□□□□□ -0.58
SMYD3-201ENST00000366516 KIF16BQ96L93 1317 aa11.43□□□□□ -0.58
SMYD3-201ENST00000366516 TPM2P07951 284 aa11.43□□□□□ -0.58
SMYD3-201ENST00000366516 DDX19BQ9UMR2 479 aa11.43□□□□□ -0.58
SMYD3-201ENST00000366516 PCDHB15Q9Y5E8 787 aa11.43□□□□□ -0.58
SMYD3-201ENST00000366516 VWDEQ8N2E2 1590 aa11.43□□□□□ -0.58
SMYD3-201ENST00000366516 ESPNB1AK53 854 aa11.42□□□□□ -0.58
SMYD3-201ENST00000366516 ATXN8OSP0DMR3 200 aa11.42□□□□□ -0.58
SMYD3-201ENST00000366516 SAMD1Q6SPF0 538 aaPredicted RBP11.42□□□□□ -0.58
SMYD3-201ENST00000366516 MORC1Q86VD1 984 aa11.42□□□□□ -0.58
SMYD3-201ENST00000366516 ANP32BQ92688 251 aaKnown RBP11.42□□□□□ -0.58
SMYD3-201ENST00000366516 ZFYVE16Q7Z3T8 1539 aa11.42□□□□□ -0.58
SMYD3-201ENST00000366516 ZNF518AQ6AHZ1 1483 aa11.42□□□□□ -0.58
SMYD3-201ENST00000366516 KIF13AQ9H1H9 1805 aa11.42□□□□□ -0.58
SMYD3-201ENST00000366516 DZIP1LQ8IYY4 767 aaKnown RBP11.42□□□□□ -0.58
SMYD3-201ENST00000366516 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
SMYD3-201ENST00000366516 CHMP4BQ9H444 224 aaKnown RBP11.42□□□□□ -0.58
SMYD3-201ENST00000366516 ADGRB2O60241 1585 aa11.42□□□□□ -0.58
SMYD3-201ENST00000366516 KIF1BO60333 1816 aa11.42□□□□□ -0.58
SMYD3-201ENST00000366516 NRXN1Q9ULB1 1477 aa11.42□□□□□ -0.58
SMYD3-201ENST00000366516 REREQ9P2R6 1566 aa11.41□□□□□ -0.58
SMYD3-201ENST00000366516 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
SMYD3-201ENST00000366516 RBM25P49756 843 aaKnown RBP11.41□□□□□ -0.58
SMYD3-201ENST00000366516 TCP11L2Q8N4U5 519 aa11.41□□□□□ -0.58
SMYD3-201ENST00000366516 IFT172Q9UG01 1749 aa11.41□□□□□ -0.58
SMYD3-201ENST00000366516 NSD3Q9BZ95 1437 aa11.41□□□□□ -0.58
SMYD3-201ENST00000366516 KDM4FA0A1W2PPD8 638 aa11.4□□□□□ -0.58
SMYD3-201ENST00000366516 PUS7Q96PZ0 661 aaKnown RBP11.4□□□□□ -0.58
SMYD3-201ENST00000366516 ABCC11Q96J66 1382 aa11.4□□□□□ -0.58
SMYD3-201ENST00000366516 IBTKQ9P2D0 1353 aaPredicted RBP11.4□□□□□ -0.58
SMYD3-201ENST00000366516 SPAG9O60271 1321 aaKnown RBP11.4□□□□□ -0.58
SMYD3-201ENST00000366516 MFAP1P55081 439 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms