RNA–Protein interactions for RNA: ENST00000361391.10

CTNND1-203, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-203ENST00000361391 SKIDA1Q1XH10 827 aa9.77□□□□□ -0.85
CTNND1-203ENST00000361391 TMEM132EQ6IEE7 984 aa9.77□□□□□ -0.85
CTNND1-203ENST00000361391 RIC3Q7Z5B4 369 aa9.77□□□□□ -0.85
CTNND1-203ENST00000361391 ERICH2A1L162 156 aa9.77□□□□□ -0.85
CTNND1-203ENST00000361391 STK11IPQ8N1F8 1099 aa9.77□□□□□ -0.85
CTNND1-203ENST00000361391 R3HCC1Q9Y3T6 440 aaKnown RBP9.77□□□□□ -0.85
CTNND1-203ENST00000361391 NFKBIBQ15653 356 aa9.77□□□□□ -0.85
CTNND1-203ENST00000361391 CDCA7LQ96GN5 454 aa9.77□□□□□ -0.85
CTNND1-203ENST00000361391 GPS2Q13227 327 aa9.76□□□□□ -0.85
CTNND1-203ENST00000361391 ATAD2BQ9ULI0 1458 aa9.76□□□□□ -0.85
CTNND1-203ENST00000361391 API5Q9BZZ5 524 aaKnown RBP9.76□□□□□ -0.85
CTNND1-203ENST00000361391 KIF7Q2M1P5 1343 aa9.76□□□□□ -0.85
CTNND1-203ENST00000361391 IPO7O95373 1038 aaKnown RBP9.76□□□□□ -0.85
CTNND1-203ENST00000361391 RNF20Q5VTR2 975 aa9.76□□□□□ -0.85
CTNND1-203ENST00000361391 CYB5RLQ6IPT4 315 aa9.76□□□□□ -0.85
CTNND1-203ENST00000361391 DNAJC2Q99543 621 aaKnown RBP9.76□□□□□ -0.85
CTNND1-203ENST00000361391 DDX58O95786 925 aaKnown RBP9.75□□□□□ -0.85
CTNND1-203ENST00000361391 FANCIQ9NVI1 1328 aa9.75□□□□□ -0.85
CTNND1-203ENST00000361391 CEBPZQ03701 1054 aaKnown RBP9.75□□□□□ -0.85
CTNND1-203ENST00000361391 ANKRD20A12PQ8NF67 263 aa9.75□□□□□ -0.85
CTNND1-203ENST00000361391 CADPSQ9ULU8 1353 aa9.75□□□□□ -0.85
CTNND1-203ENST00000361391 PRDM2Q13029 1718 aa9.75□□□□□ -0.85
CTNND1-203ENST00000361391 MAP4K4O95819 1239 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-203ENST00000361391 RSPH4AQ5TD94 716 aa9.75□□□□□ -0.85
CTNND1-203ENST00000361391 LRRFIP1Q32MZ4 808 aaKnown RBP9.75□□□□□ -0.85
CTNND1-203ENST00000361391 MPNDQ8N594 471 aa9.75□□□□□ -0.85
CTNND1-203ENST00000361391 CCDC47Q96A33 483 aaKnown RBP9.75□□□□□ -0.85
CTNND1-203ENST00000361391 PPM1FP49593 454 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-203ENST00000361391 FAM43AQ8N2R8 423 aa9.74□□□□□ -0.85
CTNND1-203ENST00000361391 ATP2B1P20020 1258 aa9.74□□□□□ -0.85
CTNND1-203ENST00000361391 PIP4K2BP78356 416 aa9.74□□□□□ -0.85
CTNND1-203ENST00000361391 CCDC43Q96MW1 224 aaKnown RBP9.74□□□□□ -0.85
CTNND1-203ENST00000361391 ADAMTS8Q9UP79 889 aa9.74□□□□□ -0.85
CTNND1-203ENST00000361391 ROCK1Q13464 1354 aa9.74□□□□□ -0.85
CTNND1-203ENST00000361391 CAVIN1Q6NZI2 390 aaKnown RBP9.74□□□□□ -0.85
CTNND1-203ENST00000361391 CCDC73Q6ZRK6 1079 aa9.74□□□□□ -0.85
CTNND1-203ENST00000361391 HOOK1Q9UJC3 728 aaKnown RBP9.73□□□□□ -0.85
CTNND1-203ENST00000361391 UBTFL1P0CB47 393 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-203ENST00000361391 MNS1Q8NEH6 495 aa9.73□□□□□ -0.85
CTNND1-203ENST00000361391 CCDC7Q96M83 1385 aa9.73□□□□□ -0.85
CTNND1-203ENST00000361391 RBM33Q96EV2 1170 aaKnown RBP9.73□□□□□ -0.85
CTNND1-203ENST00000361391 NASPP49321 788 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-203ENST00000361391 RALYLQ86SE5 291 aaKnown RBP9.72□□□□□ -0.85
CTNND1-203ENST00000361391 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
CTNND1-203ENST00000361391 NLRP2Q9NX02 1062 aa9.72□□□□□ -0.85
CTNND1-203ENST00000361391 CDC45O75419 566 aa9.72□□□□□ -0.85
CTNND1-203ENST00000361391 FMNL2Q96PY5 1086 aa9.72□□□□□ -0.85
CTNND1-203ENST00000361391 ERC2O15083 957 aa9.72□□□□□ -0.85
CTNND1-203ENST00000361391 BRPF3Q9ULD4 1205 aa9.72□□□□□ -0.85
CTNND1-203ENST00000361391 GNAI1P63096 354 aa9.72□□□□□ -0.85
CTNND1-203ENST00000361391 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-203ENST00000361391 RUFY1Q96T51 708 aa9.72□□□□□ -0.85
CTNND1-203ENST00000361391 TEX35Q5T0J7 233 aa9.72□□□□□ -0.85
CTNND1-203ENST00000361391 SPC24Q8NBT2 197 aa9.72□□□□□ -0.85
CTNND1-203ENST00000361391 BRPF1P55201 1214 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-203ENST00000361391 CHMP4CQ96CF2 233 aa9.71□□□□□ -0.85
CTNND1-203ENST00000361391 NUCB2P80303 420 aa9.71□□□□□ -0.85
CTNND1-203ENST00000361391 STK3Q13188 491 aa9.71□□□□□ -0.85
CTNND1-203ENST00000361391 CT47A1Q5JQC4 288 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-203ENST00000361391 PRPF40AO75400 957 aaKnown RBP9.71□□□□□ -0.85
CTNND1-203ENST00000361391 SMC2O95347 1197 aa9.71□□□□□ -0.85
CTNND1-203ENST00000361391 RBM10P98175 930 aaKnown RBP9.71□□□□□ -0.85
CTNND1-203ENST00000361391 SAFBQ15424 915 aaKnown RBP eCLIP9.71□□□□□ -0.85
CTNND1-203ENST00000361391 RRP12Q5JTH9 1297 aaKnown RBP9.71□□□□□ -0.85
CTNND1-203ENST00000361391 ZFYVE27Q5T4F4 411 aa9.71□□□□□ -0.85
CTNND1-203ENST00000361391 CAGE1Q8TC20 777 aa9.71□□□□□ -0.86
CTNND1-203ENST00000361391 TSR2Q969E8 191 aaKnown RBP9.71□□□□□ -0.86
CTNND1-203ENST00000361391 EPS15P42566 896 aa9.71□□□□□ -0.86
CTNND1-203ENST00000361391 IKQ13123 557 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-203ENST00000361391 RAPGEF4Q8WZA2 1011 aa9.7□□□□□ -0.86
CTNND1-203ENST00000361391 IBSPP21815 317 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-203ENST00000361391 MTHFSP49914 203 aa9.7□□□□□ -0.86
CTNND1-203ENST00000361391 PTPRGP23470 1445 aa9.7□□□□□ -0.86
CTNND1-203ENST00000361391 CNTLNQ9NXG0 1405 aa9.7□□□□□ -0.86
CTNND1-203ENST00000361391 NUTM2BA6NNL0 878 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-203ENST00000361391 NUTM2EB1AL46 878 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-203ENST00000361391 OLFM4Q6UX06 510 aa9.7□□□□□ -0.86
CTNND1-203ENST00000361391 NUTM2AQ8IVF1 878 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-203ENST00000361391 PAF1Q8N7H5 531 aa9.7□□□□□ -0.86
CTNND1-203ENST00000361391 SURF6O75683 361 aaKnown RBP9.69□□□□□ -0.86
CTNND1-203ENST00000361391 DHX37Q8IY37 1157 aaKnown RBP9.69□□□□□ -0.86
CTNND1-203ENST00000361391 CNTROBQ8N137 903 aa9.69□□□□□ -0.86
CTNND1-203ENST00000361391 SDF4Q9BRK5 362 aa9.69□□□□□ -0.86
CTNND1-203ENST00000361391 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.69□□□□□ -0.861e-6■■■■■ 38.5
CTNND1-203ENST00000361391 PDZRN3Q9UPQ7 1066 aa9.69□□□□□ -0.86
CTNND1-203ENST00000361391 NINLQ9Y2I6 1382 aa9.69□□□□□ -0.86
CTNND1-203ENST00000361391 FANCD2Q9BXW9 1451 aa9.69□□□□□ -0.86
CTNND1-203ENST00000361391 TRAK2O60296 914 aa9.69□□□□□ -0.86
CTNND1-203ENST00000361391 BCAR3O75815 825 aa9.69□□□□□ -0.86
CTNND1-203ENST00000361391 NOB1Q9ULX3 412 aaKnown RBP9.69□□□□□ -0.86
CTNND1-203ENST00000361391 SIL1Q9H173 461 aa9.69□□□□□ -0.86
CTNND1-203ENST00000361391 WASHC2AQ641Q2 1341 aa9.69□□□□□ -0.86
CTNND1-203ENST00000361391 EXOSC9Q06265 439 aaKnown RBP9.69□□□□□ -0.86
CTNND1-203ENST00000361391 FIBPO43427 364 aa9.69□□□□□ -0.86
CTNND1-203ENST00000361391 HSP90AB2PQ58FF8 381 aa9.69□□□□□ -0.86
CTNND1-203ENST00000361391 TRIM5Q9C035 493 aa9.69□□□□□ -0.86
CTNND1-203ENST00000361391 NEK4P51957 841 aa9.68□□□□□ -0.86
CTNND1-203ENST00000361391 CCDC39Q9UFE4 941 aa9.68□□□□□ -0.86
CTNND1-203ENST00000361391 AKNAQ7Z591 1439 aa9.68□□□□□ -0.86
CTNND1-203ENST00000361391 AK7Q96M32 723 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms