RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 APAF1O14727 1248 aa26.53■■□□□ 1.84
CHD1L-201ENST00000361293 MLECQ14165 292 aa26.53■■□□□ 1.84
CHD1L-201ENST00000361293 USP32Q8NFA0 1604 aa26.52■■□□□ 1.84
CHD1L-201ENST00000361293 PTPRMP28827 1452 aa26.52■■□□□ 1.84
CHD1L-201ENST00000361293 POLR3AO14802 1390 aaPredicted RBP26.51■■□□□ 1.83
CHD1L-201ENST00000361293 KIF13AQ9H1H9 1805 aa26.51■■□□□ 1.83
CHD1L-201ENST00000361293 GOLGA2Q08379 1002 aa26.49■■□□□ 1.83
CHD1L-201ENST00000361293 PUS7Q96PZ0 661 aaKnown RBP26.49■■□□□ 1.83
CHD1L-201ENST00000361293 ANKRD36BQ8N2N9 1353 aa26.49■■□□□ 1.83
CHD1L-201ENST00000361293 SHPRHQ149N8 1683 aa26.49■■□□□ 1.83
CHD1L-201ENST00000361293 YTHDC2Q9H6S0 1430 aaKnown RBP26.48■■□□□ 1.83
CHD1L-201ENST00000361293 STAG3Q9UJ98 1225 aa26.48■■□□□ 1.83
CHD1L-201ENST00000361293 CGNL1Q0VF96 1302 aa26.48■■□□□ 1.83
CHD1L-201ENST00000361293 ALKQ9UM73 1620 aa26.47■■□□□ 1.83
CHD1L-201ENST00000361293 PRAM1Q96QH2 718 aa26.47■■□□□ 1.83
CHD1L-201ENST00000361293 SPINK5Q9NQ38 1064 aaPredicted RBP26.47■■□□□ 1.83
CHD1L-201ENST00000361293 PPP6R1Q9UPN7 881 aa26.46■■□□□ 1.83
CHD1L-201ENST00000361293 SPATA31D1Q6ZQQ2 1576 aa26.46■■□□□ 1.83
CHD1L-201ENST00000361293 MINK1Q8N4C8 1332 aaPredicted RBP26.45■■□□□ 1.82
CHD1L-201ENST00000361293 ARHGEF40Q8TER5 1519 aa26.45■■□□□ 1.82
CHD1L-201ENST00000361293 SLFN5Q08AF3 891 aa26.44■■□□□ 1.82
CHD1L-201ENST00000361293 A2ML1A8K2U0 1454 aa26.44■■□□□ 1.82
CHD1L-201ENST00000361293 SRPK2P78362 688 aaKnown RBP26.44■■□□□ 1.82
CHD1L-201ENST00000361293 A0A1W2PP64 1363 aa26.43■■□□□ 1.82
CHD1L-201ENST00000361293 DMRT2Q9Y5R5 561 aa26.42■■□□□ 1.82
CHD1L-201ENST00000361293 C20orf194Q5TEA3 1177 aa26.42■■□□□ 1.82
CHD1L-201ENST00000361293 MTHFSP49914 203 aa26.41■■□□□ 1.82
CHD1L-201ENST00000361293 TRMT2AQ8IZ69 625 aaKnown RBP26.41■■□□□ 1.82
CHD1L-201ENST00000361293 CRBNQ96SW2 442 aa26.41■■□□□ 1.82
CHD1L-201ENST00000361293 POGKQ9P215 609 aa26.41■■□□□ 1.82
CHD1L-201ENST00000361293 FANCIQ9NVI1 1328 aa26.39■■□□□ 1.81
CHD1L-201ENST00000361293 MSH5O43196 834 aa26.38■■□□□ 1.81
CHD1L-201ENST00000361293 RIMS2Q9UQ26 1411 aa26.37■■□□□ 1.81
CHD1L-201ENST00000361293 NSD2O96028 1365 aa26.36■■□□□ 1.81
CHD1L-201ENST00000361293 ABCC11Q96J66 1382 aa26.36■■□□□ 1.81
CHD1L-201ENST00000361293 CD163L1Q9NR16 1453 aa26.35■■□□□ 1.81
CHD1L-201ENST00000361293 SETD1AO15047 1707 aaKnown RBP26.35■■□□□ 1.81
CHD1L-201ENST00000361293 NINLQ9Y2I6 1382 aa26.34■■□□□ 1.81
CHD1L-201ENST00000361293 ATAD2Q6PL18 1390 aa26.34■■□□□ 1.81
CHD1L-201ENST00000361293 NKTRP30414 1462 aaKnown RBP26.33■■□□□ 1.8
CHD1L-201ENST00000361293 WWC1Q8IX03 1113 aa26.31■■□□□ 1.8
CHD1L-201ENST00000361293 GGNBP2Q9H3C7 697 aa26.31■■□□□ 1.8
CHD1L-201ENST00000361293 RRP7AQ9Y3A4 280 aaKnown RBP26.31■■□□□ 1.8
CHD1L-201ENST00000361293 ZMYM3Q14202 1370 aa26.31■■□□□ 1.8
CHD1L-201ENST00000361293 CDK19Q9BWU1 502 aa26.31■■□□□ 1.8
CHD1L-201ENST00000361293 IQSEC2Q5JU85 1478 aa26.31■■□□□ 1.8
CHD1L-201ENST00000361293 E9PSI1 815 aa26.3■■□□□ 1.8
CHD1L-201ENST00000361293 WAPLQ7Z5K2 1190 aa26.3■■□□□ 1.8
CHD1L-201ENST00000361293 NEUROD2Q15784 382 aa26.3■■□□□ 1.8
CHD1L-201ENST00000361293 RUNDC1Q96C34 613 aa26.29■■□□□ 1.8
CHD1L-201ENST00000361293 NGEFQ8N5V2 710 aa26.28■■□□□ 1.8
CHD1L-201ENST00000361293 CFAP53Q96M91 514 aa26.28■■□□□ 1.8
CHD1L-201ENST00000361293 NRXN3Q9Y4C0 1643 aa26.28■■□□□ 1.8
CHD1L-201ENST00000361293 TCP11L2Q8N4U5 519 aa26.28■■□□□ 1.8
CHD1L-201ENST00000361293 NLRP1Q9C000 1473 aa26.27■■□□□ 1.8
CHD1L-201ENST00000361293 TERF2IPQ9NYB0 399 aa26.27■■□□□ 1.8
CHD1L-201ENST00000361293 FYB1O15117 783 aa26.26■■□□□ 1.79
CHD1L-201ENST00000361293 ANP32EQ9BTT0 268 aa26.26■■□□□ 1.79
CHD1L-201ENST00000361293 ESF1Q9H501 851 aaKnown RBP26.26■■□□□ 1.79
CHD1L-201ENST00000361293 DLC1Q96QB1 1528 aa26.26■■□□□ 1.79
CHD1L-201ENST00000361293 CABP1Q9NZU7 370 aa26.25■■□□□ 1.79
CHD1L-201ENST00000361293 BCAR3O75815 825 aa26.25■■□□□ 1.79
CHD1L-201ENST00000361293 ANKRD26Q9UPS8 1709 aa26.23■■□□□ 1.79
CHD1L-201ENST00000361293 METP08581 1390 aa26.23■■□□□ 1.79
CHD1L-201ENST00000361293 U2AF1L5P0DN76 240 aaPredicted RBP26.22■■□□□ 1.79
CHD1L-201ENST00000361293 U2AF1Q01081 240 aaKnown RBP eCLIP26.22■■□□□ 1.792e-6■■□□□ 13.9
CHD1L-201ENST00000361293 PHF23Q9BUL5 403 aaPredicted RBP26.22■■□□□ 1.79
CHD1L-201ENST00000361293 SKAP1Q86WV1 359 aa26.21■■□□□ 1.79
CHD1L-201ENST00000361293 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.2■■□□□ 1.78
CHD1L-201ENST00000361293 COL3A1P02461 1466 aaPredicted RBP26.19■■□□□ 1.78
CHD1L-201ENST00000361293 HDGFL2Q7Z4V5 671 aaPredicted RBP26.19■■□□□ 1.78
CHD1L-201ENST00000361293 MED14O60244 1454 aa26.18■■□□□ 1.78
CHD1L-201ENST00000361293 TNRQ92752 1358 aa26.17■■□□□ 1.78
CHD1L-201ENST00000361293 KIF20BQ96Q89 1820 aa26.16■■□□□ 1.78
CHD1L-201ENST00000361293 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.15■■□□□ 1.78
CHD1L-201ENST00000361293 TXNDC2Q86VQ3 553 aa26.15■■□□□ 1.78
CHD1L-201ENST00000361293 ADGRB2O60241 1585 aa26.15■■□□□ 1.78
CHD1L-201ENST00000361293 KDM2BQ8NHM5 1336 aa26.14■■□□□ 1.77
CHD1L-201ENST00000361293 TCERG1O14776 1098 aaKnown RBP26.14■■□□□ 1.77
CHD1L-201ENST00000361293 U2SURPO15042 1029 aaKnown RBP26.13■■□□□ 1.77
CHD1L-201ENST00000361293 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.13■■□□□ 1.772e-7■■■■□ 20.7
CHD1L-201ENST00000361293 UBR1Q8IWV7 1749 aa26.12■■□□□ 1.77
CHD1L-201ENST00000361293 CCDC27Q2M243 656 aa26.12■■□□□ 1.77
CHD1L-201ENST00000361293 WDR63Q8IWG1 891 aa26.11■■□□□ 1.77
CHD1L-201ENST00000361293 ATP7BP35670 1465 aa26.11■■□□□ 1.77
CHD1L-201ENST00000361293 FBLN1P23142 703 aa26.11■■□□□ 1.77
CHD1L-201ENST00000361293 PLEKHF1Q96S99 279 aa26.1■■□□□ 1.77
CHD1L-201ENST00000361293 WASLO00401 505 aaPredicted RBP26.09■■□□□ 1.77
CHD1L-201ENST00000361293 TMEM2Q9UHN6 1383 aa26.09■■□□□ 1.77
CHD1L-201ENST00000361293 NCKAP5LQ9HCH0 1330 aa26.08■■□□□ 1.77
CHD1L-201ENST00000361293 KNDC1Q76NI1 1749 aa26.07■■□□□ 1.76
CHD1L-201ENST00000361293 PPIP5K1Q6PFW1 1433 aa26.07■■□□□ 1.76
CHD1L-201ENST00000361293 PNPLA6Q8IY17 1366 aa26.06■■□□□ 1.76
CHD1L-201ENST00000361293 TECPR2O15040 1411 aa26.05■■□□□ 1.76
CHD1L-201ENST00000361293 CPSF1Q10570 1443 aaKnown RBP26.05■■□□□ 1.76
CHD1L-201ENST00000361293 PDE4AP27815 886 aa26.05■■□□□ 1.76
CHD1L-201ENST00000361293 CEBPAP49715 358 aaPredicted RBP26.05■■□□□ 1.76
CHD1L-201ENST00000361293 RARSP54136 660 aaKnown RBP26.05■■□□□ 1.76
CHD1L-201ENST00000361293 CPS1P31327 1500 aa26.04■■□□□ 1.76
CHD1L-201ENST00000361293 MS4A1P11836 297 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms