RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 GPS2Q13227 327 aa16.96■□□□□ 0.31
SMC5-201ENST00000361138 C20orf194Q5TEA3 1177 aa16.95■□□□□ 0.3
SMC5-201ENST00000361138 HECW1Q76N89 1606 aa16.95■□□□□ 0.3
SMC5-201ENST00000361138 SCAPERQ9BY12 1400 aa16.95■□□□□ 0.3
SMC5-201ENST00000361138 A0A0U1RQG5 324 aaPredicted RBP16.95■□□□□ 0.3
SMC5-201ENST00000361138 SLFN5Q08AF3 891 aa16.95■□□□□ 0.3
SMC5-201ENST00000361138 RUFY2Q8WXA3 655 aa16.95■□□□□ 0.3
SMC5-201ENST00000361138 CWC22Q9HCG8 908 aaKnown RBP16.95■□□□□ 0.3
SMC5-201ENST00000361138 NBPF1Q3BBV0 1214 aa16.95■□□□□ 0.3
SMC5-201ENST00000361138 GCC1Q96CN9 775 aa16.95■□□□□ 0.3
SMC5-201ENST00000361138 SASS6Q6UVJ0 657 aa16.94■□□□□ 0.3
SMC5-201ENST00000361138 CCDC34Q96HJ3 373 aa16.94■□□□□ 0.3
SMC5-201ENST00000361138 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
SMC5-201ENST00000361138 GNAI1P63096 354 aa16.93■□□□□ 0.3
SMC5-201ENST00000361138 MVPQ14764 893 aaKnown RBP16.93■□□□□ 0.3
SMC5-201ENST00000361138 ZSCAN30Q86W11 494 aa16.93■□□□□ 0.3
SMC5-201ENST00000361138 BICD2Q8TD16 824 aa16.93■□□□□ 0.3
SMC5-201ENST00000361138 NOB1Q9ULX3 412 aaKnown RBP16.93■□□□□ 0.3
SMC5-201ENST00000361138 CCAR2Q8N163 923 aaKnown RBP16.92■□□□□ 0.3
SMC5-201ENST00000361138 TOPBP1Q92547 1522 aa16.92■□□□□ 0.3
SMC5-201ENST00000361138 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
SMC5-201ENST00000361138 IFT140Q96RY7 1462 aa16.92■□□□□ 0.3
SMC5-201ENST00000361138 ZKSCAN1P17029 563 aaPredicted RBP16.92■□□□□ 0.3
SMC5-201ENST00000361138 VPS37CA5D8V6 355 aaPredicted RBP16.92■□□□□ 0.3
SMC5-201ENST00000361138 SETQ01105 290 aaPredicted RBP16.91■□□□□ 0.3
SMC5-201ENST00000361138 EXOSC9Q06265 439 aaKnown RBP16.91■□□□□ 0.3
SMC5-201ENST00000361138 WDR63Q8IWG1 891 aa16.9■□□□□ 0.3
SMC5-201ENST00000361138 TULP1O00294 542 aaPredicted RBP16.9■□□□□ 0.3
SMC5-201ENST00000361138 HOMER1Q86YM7 354 aa16.9■□□□□ 0.3
SMC5-201ENST00000361138 TPD52L1Q16890 204 aaPredicted RBP16.9■□□□□ 0.3
SMC5-201ENST00000361138 MCM2P49736 904 aa16.9■□□□□ 0.3
SMC5-201ENST00000361138 MTHFSP49914 203 aa16.9■□□□□ 0.3
SMC5-201ENST00000361138 COG3Q96JB2 828 aa16.9■□□□□ 0.3
SMC5-201ENST00000361138 ARGLU1Q9NWB6 273 aaPredicted RBP16.9■□□□□ 0.3
SMC5-201ENST00000361138 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.89■□□□□ 0.29
SMC5-201ENST00000361138 CHMP4CQ96CF2 233 aa16.89■□□□□ 0.29
SMC5-201ENST00000361138 CCDC66A2RUB6 948 aa16.89■□□□□ 0.29
SMC5-201ENST00000361138 ANKRD30BQ9BXX2 1392 aa16.89■□□□□ 0.29
SMC5-201ENST00000361138 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMC5-201ENST00000361138 VGFO15240 615 aaPredicted RBP16.88■□□□□ 0.29
SMC5-201ENST00000361138 CT47B1P0C2W7 299 aaPredicted RBP16.88■□□□□ 0.29
SMC5-201ENST00000361138 NOC3LQ8WTT2 800 aaKnown RBP16.88■□□□□ 0.29
SMC5-201ENST00000361138 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
SMC5-201ENST00000361138 PODXL2Q9NZ53 605 aa16.87■□□□□ 0.29
SMC5-201ENST00000361138 NKTRP30414 1462 aaKnown RBP16.87■□□□□ 0.29
SMC5-201ENST00000361138 TBC1D2Q9BYX2 928 aa16.87■□□□□ 0.29
SMC5-201ENST00000361138 C1orf115Q9H7X2 142 aa16.87■□□□□ 0.29
SMC5-201ENST00000361138 NEK4P51957 841 aa16.86■□□□□ 0.29
SMC5-201ENST00000361138 PDCL3Q9H2J4 239 aa16.86■□□□□ 0.29
SMC5-201ENST00000361138 GORABQ5T7V8 394 aa16.86■□□□□ 0.29
SMC5-201ENST00000361138 TSR2Q969E8 191 aaKnown RBP16.86■□□□□ 0.29
SMC5-201ENST00000361138 AMPHP49418 695 aa16.85■□□□□ 0.29
SMC5-201ENST00000361138 BCL11BQ9C0K0 894 aaPredicted RBP16.85■□□□□ 0.29
SMC5-201ENST00000361138 MINK1Q8N4C8 1332 aaPredicted RBP16.85■□□□□ 0.29
SMC5-201ENST00000361138 CREBRFQ8IUR6 639 aa16.85■□□□□ 0.29
SMC5-201ENST00000361138 C9orf84Q5VXU9 1444 aa16.85■□□□□ 0.29
SMC5-201ENST00000361138 POLA1P09884 1462 aaPredicted RBP16.85■□□□□ 0.29
SMC5-201ENST00000361138 CCDC27Q2M243 656 aa16.84■□□□□ 0.29
SMC5-201ENST00000361138 MNS1Q8NEH6 495 aa16.84■□□□□ 0.29
SMC5-201ENST00000361138 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
SMC5-201ENST00000361138 RNF20Q5VTR2 975 aa16.84■□□□□ 0.29
SMC5-201ENST00000361138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.84■□□□□ 0.29
SMC5-201ENST00000361138 ATF7IPQ6VMQ6 1270 aa16.84■□□□□ 0.29
SMC5-201ENST00000361138 SNAPC4Q5SXM2 1469 aa16.83■□□□□ 0.28
SMC5-201ENST00000361138 DNMBPQ6XZF7 1577 aa16.83■□□□□ 0.28
SMC5-201ENST00000361138 TRIM5Q9C035 493 aa16.83■□□□□ 0.28
SMC5-201ENST00000361138 HMOX1P09601 288 aa16.83■□□□□ 0.28
SMC5-201ENST00000361138 LRPPRCP42704 1394 aaKnown RBP16.82■□□□□ 0.28
SMC5-201ENST00000361138 IFIT2P09913 472 aaKnown RBP16.82■□□□□ 0.28
SMC5-201ENST00000361138 NOM1Q5C9Z4 860 aaKnown RBP16.82■□□□□ 0.28
SMC5-201ENST00000361138 SPC24Q8NBT2 197 aa16.82■□□□□ 0.28
SMC5-201ENST00000361138 WWC1Q8IX03 1113 aa16.82■□□□□ 0.28
SMC5-201ENST00000361138 GGNBP2Q9H3C7 697 aa16.82■□□□□ 0.28
SMC5-201ENST00000361138 FBXW7Q969H0 707 aa16.81■□□□□ 0.28
SMC5-201ENST00000361138 TPM1P09493 284 aa16.81■□□□□ 0.28
SMC5-201ENST00000361138 ERC2O15083 957 aa16.8■□□□□ 0.28
SMC5-201ENST00000361138 CCDC73Q6ZRK6 1079 aa16.8■□□□□ 0.28
SMC5-201ENST00000361138 RPRD2Q5VT52 1461 aaKnown RBP16.8■□□□□ 0.28
SMC5-201ENST00000361138 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
SMC5-201ENST00000361138 FKBP5Q13451 457 aaPredicted RBP16.8■□□□□ 0.28
SMC5-201ENST00000361138 TNPO1Q92973 898 aaKnown RBP16.8■□□□□ 0.28
SMC5-201ENST00000361138 NAT10Q9H0A0 1025 aaKnown RBP16.8■□□□□ 0.28
SMC5-201ENST00000361138 CLCN1P35523 988 aa16.79■□□□□ 0.28
SMC5-201ENST00000361138 ZMYND15Q9H091 742 aa16.79■□□□□ 0.28
SMC5-201ENST00000361138 DUSP27Q5VZP5 1158 aa16.79■□□□□ 0.28
SMC5-201ENST00000361138 WDR33Q9C0J8 1336 aaKnown RBP16.78■□□□□ 0.28
SMC5-201ENST00000361138 CABP2Q9NPB3 220 aa16.78■□□□□ 0.28
SMC5-201ENST00000361138 CWC15Q9P013 229 aaKnown RBP16.78■□□□□ 0.28
SMC5-201ENST00000361138 CCDC70Q6NSX1 233 aa16.78■□□□□ 0.28
SMC5-201ENST00000361138 MPNDQ8N594 471 aa16.78■□□□□ 0.28
SMC5-201ENST00000361138 NECTIN2Q92692 538 aa16.78■□□□□ 0.28
SMC5-201ENST00000361138 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.28
SMC5-201ENST00000361138 SYCE3A1L190 88 aa16.77■□□□□ 0.28
SMC5-201ENST00000361138 CNTROBQ8N137 903 aa16.77■□□□□ 0.28
SMC5-201ENST00000361138 FIBPO43427 364 aa16.77■□□□□ 0.28
SMC5-201ENST00000361138 TSR1Q2NL82 804 aaKnown RBP16.77■□□□□ 0.28
SMC5-201ENST00000361138 CCDC192P0DO97 292 aa16.77■□□□□ 0.28
SMC5-201ENST00000361138 HSP90AB4PQ58FF6 505 aa16.77■□□□□ 0.27
SMC5-201ENST00000361138 TBC1D32Q96NH3 1257 aa16.77■□□□□ 0.27
SMC5-201ENST00000361138 ARHGAP5Q13017 1502 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms