RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 STK26Q9P289 416 aa17.19■□□□□ 0.34
PPARGC1B-202ENST00000360453 NPC1L1Q9UHC9 1359 aa17.19■□□□□ 0.34
PPARGC1B-202ENST00000360453 BECN1Q14457 450 aa17.18■□□□□ 0.34
PPARGC1B-202ENST00000360453 FTSJ3Q8IY81 847 aaKnown RBP17.18■□□□□ 0.34
PPARGC1B-202ENST00000360453 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
PPARGC1B-202ENST00000360453 CEP152O94986 1710 aa17.17■□□□□ 0.34
PPARGC1B-202ENST00000360453 ZCCHC11Q5TAX3 1644 aaKnown RBP17.16■□□□□ 0.34
PPARGC1B-202ENST00000360453 UPF2Q9HAU5 1272 aaKnown RBP17.16■□□□□ 0.34
PPARGC1B-202ENST00000360453 ZFYVE16Q7Z3T8 1539 aa17.16■□□□□ 0.34
PPARGC1B-202ENST00000360453 GGNBP2Q9H3C7 697 aa17.16■□□□□ 0.34
PPARGC1B-202ENST00000360453 POLR3AO14802 1390 aaPredicted RBP17.16■□□□□ 0.34
PPARGC1B-202ENST00000360453 PMFBP1Q8TBY8 1022 aa17.15■□□□□ 0.34
PPARGC1B-202ENST00000360453 ABCA6Q8N139 1617 aa17.15■□□□□ 0.34
PPARGC1B-202ENST00000360453 FBLN1P23142 703 aa17.15■□□□□ 0.34
PPARGC1B-202ENST00000360453 EXOSC9Q06265 439 aaKnown RBP17.15■□□□□ 0.34
PPARGC1B-202ENST00000360453 ITPRIPQ8IWB1 547 aa17.15■□□□□ 0.34
PPARGC1B-202ENST00000360453 SMC4Q9NTJ3 1288 aa17.15■□□□□ 0.34
PPARGC1B-202ENST00000360453 TBC1D32Q96NH3 1257 aa17.14■□□□□ 0.33
PPARGC1B-202ENST00000360453 RWDD1Q9H446 243 aaPredicted RBP17.13■□□□□ 0.33
PPARGC1B-202ENST00000360453 CFAP53Q96M91 514 aa17.13■□□□□ 0.33
PPARGC1B-202ENST00000360453 FANCAO15360 1455 aa17.12■□□□□ 0.33
PPARGC1B-202ENST00000360453 ANTXR1Q9H6X2 564 aa17.12■□□□□ 0.33
PPARGC1B-202ENST00000360453 NLRP1Q9C000 1473 aa17.12■□□□□ 0.33
PPARGC1B-202ENST00000360453 MVPQ14764 893 aaKnown RBP17.12■□□□□ 0.33
PPARGC1B-202ENST00000360453 DZIP1LQ8IYY4 767 aaKnown RBP17.11■□□□□ 0.33
PPARGC1B-202ENST00000360453 STAC3Q96MF2 364 aa17.11■□□□□ 0.33
PPARGC1B-202ENST00000360453 TRIM27P14373 513 aa17.1■□□□□ 0.33
PPARGC1B-202ENST00000360453 ZKSCAN2Q63HK3 967 aa17.1■□□□□ 0.33
PPARGC1B-202ENST00000360453 SSH1Q8WYL5 1049 aa17.1■□□□□ 0.33
PPARGC1B-202ENST00000360453 ATP7AQ04656 1500 aa17.09■□□□□ 0.33
PPARGC1B-202ENST00000360453 MAP3K4Q9Y6R4 1608 aa17.09■□□□□ 0.33
PPARGC1B-202ENST00000360453 WDR63Q8IWG1 891 aa17.09■□□□□ 0.33
PPARGC1B-202ENST00000360453 PANK2Q9BZ23 570 aa17.09■□□□□ 0.33
PPARGC1B-202ENST00000360453 SRPK2P78362 688 aaKnown RBP17.09■□□□□ 0.33
PPARGC1B-202ENST00000360453 MYH16Q9H6N6 1097 aa17.09■□□□□ 0.33
PPARGC1B-202ENST00000360453 FOXD4L1Q9NU39 408 aa17.09■□□□□ 0.33
PPARGC1B-202ENST00000360453 ADGRL1O94910 1474 aa17.08■□□□□ 0.33
PPARGC1B-202ENST00000360453 NOB1Q9ULX3 412 aaKnown RBP17.08■□□□□ 0.33
PPARGC1B-202ENST00000360453 PHF23Q9BUL5 403 aaPredicted RBP17.07■□□□□ 0.32
PPARGC1B-202ENST00000360453 C22orf23Q9BZE7 217 aa17.07■□□□□ 0.32
PPARGC1B-202ENST00000360453 TET3O43151 1660 aa17.07■□□□□ 0.32
PPARGC1B-202ENST00000360453 C14orf93Q9H972 538 aaKnown RBP17.07■□□□□ 0.32
PPARGC1B-202ENST00000360453 RRAGDQ9NQL2 400 aaPredicted RBP17.07■□□□□ 0.32
PPARGC1B-202ENST00000360453 RTEL1-TNFRSF6BF6WH68 1400 aa17.07■□□□□ 0.32
PPARGC1B-202ENST00000360453 LNPKQ9C0E8 428 aa17.07■□□□□ 0.32
PPARGC1B-202ENST00000360453 MROH2AA6NES4 1674 aa17.07■□□□□ 0.32
PPARGC1B-202ENST00000360453 TMEM57Q8N5G2 664 aa17.06■□□□□ 0.32
PPARGC1B-202ENST00000360453 SHROOM2Q13796 1616 aa17.06■□□□□ 0.32
PPARGC1B-202ENST00000360453 ELL2O00472 640 aaPredicted RBP17.06■□□□□ 0.32
PPARGC1B-202ENST00000360453 MINK1Q8N4C8 1332 aaPredicted RBP17.05■□□□□ 0.32
PPARGC1B-202ENST00000360453 NGEFQ8N5V2 710 aa17.05■□□□□ 0.32
PPARGC1B-202ENST00000360453 C1orf115Q9H7X2 142 aa17.05■□□□□ 0.32
PPARGC1B-202ENST00000360453 SHPRHQ149N8 1683 aa17.05■□□□□ 0.32
PPARGC1B-202ENST00000360453 THUMPD2Q9BTF0 503 aaKnown RBP17.05■□□□□ 0.32
PPARGC1B-202ENST00000360453 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
PPARGC1B-202ENST00000360453 TRIM35Q9UPQ4 493 aa17.04■□□□□ 0.32
PPARGC1B-202ENST00000360453 NINLQ9Y2I6 1382 aa17.04■□□□□ 0.32
PPARGC1B-202ENST00000360453 SLC24A1O60721 1099 aa17.03■□□□□ 0.32
PPARGC1B-202ENST00000360453 RIPK4P57078 832 aa17.03■□□□□ 0.32
PPARGC1B-202ENST00000360453 IQSEC2Q5JU85 1478 aa17.03■□□□□ 0.32
PPARGC1B-202ENST00000360453 ZNF518AQ6AHZ1 1483 aa17.03■□□□□ 0.32
PPARGC1B-202ENST00000360453 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.32
PPARGC1B-202ENST00000360453 MCM4P33991 863 aa17.02■□□□□ 0.31
PPARGC1B-202ENST00000360453 MYOM2P54296 1465 aa17.01■□□□□ 0.31
PPARGC1B-202ENST00000360453 EVC2Q86UK5 1308 aa17.01■□□□□ 0.31
PPARGC1B-202ENST00000360453 ATF7IPQ6VMQ6 1270 aa17.01■□□□□ 0.31
PPARGC1B-202ENST00000360453 KIF1BO60333 1816 aa17.01■□□□□ 0.31
PPARGC1B-202ENST00000360453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17■□□□□ 0.31
PPARGC1B-202ENST00000360453 RAPGEF3O95398 923 aa17■□□□□ 0.31
PPARGC1B-202ENST00000360453 DEPDC5O75140 1603 aa17■□□□□ 0.31
PPARGC1B-202ENST00000360453 MROH1Q8NDA8 1641 aa17■□□□□ 0.31
PPARGC1B-202ENST00000360453 NPATQ14207 1427 aa17■□□□□ 0.31
PPARGC1B-202ENST00000360453 FAM43AQ8N2R8 423 aa16.99■□□□□ 0.31
PPARGC1B-202ENST00000360453 VIRMAQ69YN4 1812 aaKnown RBP16.99■□□□□ 0.31
PPARGC1B-202ENST00000360453 CD109Q6YHK3 1445 aa16.99■□□□□ 0.31
PPARGC1B-202ENST00000360453 PPRC1Q5VV67 1664 aaKnown RBP16.99■□□□□ 0.31
PPARGC1B-202ENST00000360453 HMOX1P09601 288 aa16.99■□□□□ 0.31
PPARGC1B-202ENST00000360453 CCDC27Q2M243 656 aa16.98■□□□□ 0.31
PPARGC1B-202ENST00000360453 GOLGA6L3A6NEY3 463 aa16.98■□□□□ 0.31
PPARGC1B-202ENST00000360453 PLEKHF1Q96S99 279 aa16.98■□□□□ 0.31
PPARGC1B-202ENST00000360453 A0A1W2PP64 1363 aa16.97■□□□□ 0.31
PPARGC1B-202ENST00000360453 TRAK2O60296 914 aa16.97■□□□□ 0.31
PPARGC1B-202ENST00000360453 SBNO2Q9Y2G9 1366 aa16.97■□□□□ 0.31
PPARGC1B-202ENST00000360453 VWDEQ8N2E2 1590 aa16.97■□□□□ 0.31
PPARGC1B-202ENST00000360453 EFCAB6Q5THR3 1501 aa16.96■□□□□ 0.31
PPARGC1B-202ENST00000360453 QRICH2Q9H0J4 1663 aa16.96■□□□□ 0.31
PPARGC1B-202ENST00000360453 FYB1O15117 783 aa16.96■□□□□ 0.31
PPARGC1B-202ENST00000360453 DDX19BQ9UMR2 479 aa16.96■□□□□ 0.31
PPARGC1B-202ENST00000360453 KIAA1210Q9ULL0 1709 aa16.96■□□□□ 0.31
PPARGC1B-202ENST00000360453 HSCBQ8IWL3 235 aa16.96■□□□□ 0.3
PPARGC1B-202ENST00000360453 RBM42Q9BTD8 480 aaKnown RBP16.96■□□□□ 0.3
PPARGC1B-202ENST00000360453 INO80Q9ULG1 1556 aaPredicted RBP16.95■□□□□ 0.3
PPARGC1B-202ENST00000360453 ANKRD45Q5TZF3 282 aa16.95■□□□□ 0.3
PPARGC1B-202ENST00000360453 PRAM1Q96QH2 718 aa16.95■□□□□ 0.3
PPARGC1B-202ENST00000360453 IDI1Q13907 227 aa16.94■□□□□ 0.3
PPARGC1B-202ENST00000360453 CHMP5Q9NZZ3 219 aa16.94■□□□□ 0.3
PPARGC1B-202ENST00000360453 ANKRD36BQ8N2N9 1353 aa16.94■□□□□ 0.3
PPARGC1B-202ENST00000360453 CD2BP2O95400 341 aaKnown RBP16.94■□□□□ 0.3
PPARGC1B-202ENST00000360453 ZBTB40Q9NUA8 1239 aa16.94■□□□□ 0.3
PPARGC1B-202ENST00000360453 L1TD1Q5T7N2 865 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms