RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 PANK3Q9H999 370 aa12.45□□□□□ -0.42
SIN3A-201ENST00000360439 CENPQQ7L2Z9 268 aaPredicted RBP12.44□□□□□ -0.42
SIN3A-201ENST00000360439 NUTM2BA6NNL0 878 aaPredicted RBP12.44□□□□□ -0.42
SIN3A-201ENST00000360439 NUTM2EB1AL46 878 aaPredicted RBP12.44□□□□□ -0.42
SIN3A-201ENST00000360439 NUTM2AQ8IVF1 878 aaPredicted RBP12.44□□□□□ -0.42
SIN3A-201ENST00000360439 PDCL3Q9H2J4 239 aa12.44□□□□□ -0.42
SIN3A-201ENST00000360439 PHF23Q9BUL5 403 aaPredicted RBP12.43□□□□□ -0.42
SIN3A-201ENST00000360439 BCCIPQ9P287 314 aaKnown RBP eCLIP12.43□□□□□ -0.42
SIN3A-201ENST00000360439 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
SIN3A-201ENST00000360439 RALGAPBQ86X10 1494 aa12.43□□□□□ -0.42
SIN3A-201ENST00000360439 PDE4AP27815 886 aa12.43□□□□□ -0.42
SIN3A-201ENST00000360439 NBPF1Q3BBV0 1214 aa12.43□□□□□ -0.42
SIN3A-201ENST00000360439 PNISRQ8TF01 805 aaKnown RBP12.43□□□□□ -0.42
SIN3A-201ENST00000360439 SECISBP2LQ93073 1101 aaKnown RBP12.43□□□□□ -0.42
SIN3A-201ENST00000360439 ARHGEF12Q9NZN5 1544 aa12.42□□□□□ -0.42
SIN3A-201ENST00000360439 GOLGA2Q08379 1002 aa12.42□□□□□ -0.42
SIN3A-201ENST00000360439 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
SIN3A-201ENST00000360439 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
SIN3A-201ENST00000360439 NLRP6P59044 892 aa12.41□□□□□ -0.42
SIN3A-201ENST00000360439 A2MP01023 1474 aa12.41□□□□□ -0.42
SIN3A-201ENST00000360439 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
SIN3A-201ENST00000360439 RPGRIP1LQ68CZ1 1315 aa12.41□□□□□ -0.42
SIN3A-201ENST00000360439 TNRQ92752 1358 aa12.41□□□□□ -0.42
SIN3A-201ENST00000360439 CALRP27797 417 aaKnown RBP12.41□□□□□ -0.42
SIN3A-201ENST00000360439 CGNQ9P2M7 1197 aaKnown RBP12.41□□□□□ -0.42
SIN3A-201ENST00000360439 ADGBQ8N7X0 1667 aa12.4□□□□□ -0.42
SIN3A-201ENST00000360439 GPRASP1Q5JY77 1395 aa12.4□□□□□ -0.42
SIN3A-201ENST00000360439 SHANK2Q9UPX8 1470 aa12.4□□□□□ -0.42
SIN3A-201ENST00000360439 EXOC6Q8TAG9 804 aa12.4□□□□□ -0.42
SIN3A-201ENST00000360439 CGNL1Q0VF96 1302 aa12.4□□□□□ -0.42
SIN3A-201ENST00000360439 ABTB2Q8N961 1025 aa12.4□□□□□ -0.42
SIN3A-201ENST00000360439 GOLGA6L3A6NEY3 463 aa12.4□□□□□ -0.43
SIN3A-201ENST00000360439 XPCQ01831 940 aaPredicted RBP12.4□□□□□ -0.43
SIN3A-201ENST00000360439 MAP7D2Q96T17 732 aa12.39□□□□□ -0.43
SIN3A-201ENST00000360439 PLCD4Q9BRC7 762 aa12.39□□□□□ -0.43
SIN3A-201ENST00000360439 ABCC10Q5T3U5 1492 aa12.39□□□□□ -0.43
SIN3A-201ENST00000360439 TPM2P07951 284 aa12.39□□□□□ -0.43
SIN3A-201ENST00000360439 CCDC184Q52MB2 194 aa12.38□□□□□ -0.43
SIN3A-201ENST00000360439 ADGRL2O95490 1459 aa12.38□□□□□ -0.43
SIN3A-201ENST00000360439 MYH16Q9H6N6 1097 aa12.38□□□□□ -0.43
SIN3A-201ENST00000360439 AMOTL2Q9Y2J4 779 aa12.38□□□□□ -0.43
SIN3A-201ENST00000360439 CALD1Q05682 793 aaKnown RBP12.38□□□□□ -0.43
SIN3A-201ENST00000360439 WAPLQ7Z5K2 1190 aa12.37□□□□□ -0.43
SIN3A-201ENST00000360439 HDAC5Q9UQL6 1122 aa12.37□□□□□ -0.43
SIN3A-201ENST00000360439 KDM5BQ9UGL1 1544 aa12.37□□□□□ -0.43
SIN3A-201ENST00000360439 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
SIN3A-201ENST00000360439 C11orf95C9JLR9 678 aaPredicted RBP12.37□□□□□ -0.43
SIN3A-201ENST00000360439 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
SIN3A-201ENST00000360439 RBM25P49756 843 aaKnown RBP12.36□□□□□ -0.43
SIN3A-201ENST00000360439 CDK19Q9BWU1 502 aa12.36□□□□□ -0.43
SIN3A-201ENST00000360439 TNNT1P13805 278 aa12.36□□□□□ -0.43
SIN3A-201ENST00000360439 UHRF1BP1Q6BDS2 1440 aa12.36□□□□□ -0.43
SIN3A-201ENST00000360439 GGNBP2Q9H3C7 697 aa12.36□□□□□ -0.43
SIN3A-201ENST00000360439 CLGNO14967 610 aa12.35□□□□□ -0.43
SIN3A-201ENST00000360439 SYTL4Q96C24 671 aaPredicted RBP12.35□□□□□ -0.43
SIN3A-201ENST00000360439 ERCC6L2Q5T890 1561 aa12.35□□□□□ -0.43
SIN3A-201ENST00000360439 SLC4A3P48751 1232 aa12.35□□□□□ -0.43
SIN3A-201ENST00000360439 NLRP2Q9NX02 1062 aa12.35□□□□□ -0.43
SIN3A-201ENST00000360439 ZMYM3Q14202 1370 aa12.35□□□□□ -0.43
SIN3A-201ENST00000360439 STRN4Q9NRL3 753 aa12.34□□□□□ -0.43
SIN3A-201ENST00000360439 CABP1Q9NZU7 370 aa12.34□□□□□ -0.43
SIN3A-201ENST00000360439 UBAP1LF5GYI3 381 aa12.34□□□□□ -0.43
SIN3A-201ENST00000360439 CRBNQ96SW2 442 aa12.33□□□□□ -0.44
SIN3A-201ENST00000360439 NINLQ9Y2I6 1382 aa12.33□□□□□ -0.44
SIN3A-201ENST00000360439 MAGI3Q5TCQ9 1506 aa12.33□□□□□ -0.44
SIN3A-201ENST00000360439 EIF2AK4Q9P2K8 1649 aaKnown RBP12.33□□□□□ -0.44
SIN3A-201ENST00000360439 NCKAP5LQ9HCH0 1330 aa12.33□□□□□ -0.44
SIN3A-201ENST00000360439 INSRP06213 1382 aa12.32□□□□□ -0.44
SIN3A-201ENST00000360439 PZPP20742 1482 aa12.32□□□□□ -0.44
SIN3A-201ENST00000360439 NFKBIBQ15653 356 aa12.32□□□□□ -0.44
SIN3A-201ENST00000360439 ADGRF5Q8IZF2 1346 aa12.31□□□□□ -0.44
SIN3A-201ENST00000360439 RTEL1-TNFRSF6BF6WH68 1400 aa12.31□□□□□ -0.44
SIN3A-201ENST00000360439 CCDC146Q8IYE0 955 aa12.31□□□□□ -0.44
SIN3A-201ENST00000360439 SLC12A5Q9H2X9 1139 aa12.31□□□□□ -0.44
SIN3A-201ENST00000360439 ATP10AO60312 1499 aa12.31□□□□□ -0.44
SIN3A-201ENST00000360439 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
SIN3A-201ENST00000360439 FAM135AQ9P2D6 1515 aa12.31□□□□□ -0.44
SIN3A-201ENST00000360439 R3HCC1Q9Y3T6 440 aaKnown RBP12.31□□□□□ -0.44
SIN3A-201ENST00000360439 FOXO3O43524 673 aa12.3□□□□□ -0.44
SIN3A-201ENST00000360439 UHRF1BP1LA0JNW5 1464 aa12.3□□□□□ -0.44
SIN3A-201ENST00000360439 ZNF592Q92610 1267 aa12.3□□□□□ -0.44
SIN3A-201ENST00000360439 HMGB1P09429 215 aaKnown RBP12.3□□□□□ -0.44
SIN3A-201ENST00000360439 PSMD1Q99460 953 aa12.3□□□□□ -0.44
SIN3A-201ENST00000360439 TSPOAP1O95153 1857 aa12.3□□□□□ -0.44
SIN3A-201ENST00000360439 SPATA31E1Q6ZUB1 1445 aa12.3□□□□□ -0.44
SIN3A-201ENST00000360439 TAF3Q5VWG9 929 aa12.3□□□□□ -0.44
SIN3A-201ENST00000360439 RWDD1Q9H446 243 aaPredicted RBP12.3□□□□□ -0.44
SIN3A-201ENST00000360439 RAPGEF4Q8WZA2 1011 aa12.29□□□□□ -0.44
SIN3A-201ENST00000360439 BACH2Q9BYV9 841 aa12.29□□□□□ -0.44
SIN3A-201ENST00000360439 PRDM11Q9NQV5 511 aa12.29□□□□□ -0.44
SIN3A-201ENST00000360439 NEO1Q92859 1461 aa12.28□□□□□ -0.44
SIN3A-201ENST00000360439 TOM1O60784 492 aa12.28□□□□□ -0.44
SIN3A-201ENST00000360439 KIAA1211Q6ZU35 1233 aa12.28□□□□□ -0.44
SIN3A-201ENST00000360439 DUOX2Q9NRD8 1548 aa12.28□□□□□ -0.44
SIN3A-201ENST00000360439 RNF123Q5XPI4 1314 aa12.27□□□□□ -0.44
SIN3A-201ENST00000360439 GPATCH11Q8N954 259 aa12.27□□□□□ -0.44
SIN3A-201ENST00000360439 NUDT16Q96DE0 195 aaKnown RBP12.27□□□□□ -0.44
SIN3A-201ENST00000360439 ADAMTS2O95450 1211 aa12.27□□□□□ -0.45
SIN3A-201ENST00000360439 TEX2Q8IWB9 1127 aa12.27□□□□□ -0.45
SIN3A-201ENST00000360439 CCDC61Q9Y6R9 512 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms