RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 CABP1Q9NZU7 370 aa8.88□□□□□ -0.99
RAB5B-201ENST00000360299 KIF7Q2M1P5 1343 aa8.88□□□□□ -0.99
RAB5B-201ENST00000360299 GGNBP2Q9H3C7 697 aa8.88□□□□□ -0.99
RAB5B-201ENST00000360299 TATP17735 454 aaPredicted RBP8.88□□□□□ -0.99
RAB5B-201ENST00000360299 STK31Q9BXU1 1019 aa8.88□□□□□ -0.99
RAB5B-201ENST00000360299 TAF7LQ5H9L4 462 aa8.88□□□□□ -0.99
RAB5B-201ENST00000360299 NEO1Q92859 1461 aa8.87□□□□□ -0.99
RAB5B-201ENST00000360299 TCERG1O14776 1098 aaKnown RBP8.87□□□□□ -0.99
RAB5B-201ENST00000360299 YEATS2Q9ULM3 1422 aa8.87□□□□□ -0.99
RAB5B-201ENST00000360299 E9PSI1 815 aa8.87□□□□□ -0.99
RAB5B-201ENST00000360299 NPHP3Q7Z494 1330 aa8.87□□□□□ -0.99
RAB5B-201ENST00000360299 ISY1Q9ULR0 285 aaKnown RBP8.87□□□□□ -0.99
RAB5B-201ENST00000360299 NUDT16Q96DE0 195 aaKnown RBP8.86□□□□□ -0.99
RAB5B-201ENST00000360299 ZNF335Q9H4Z2 1342 aaPredicted RBP8.86□□□□□ -0.99
RAB5B-201ENST00000360299 CHRNA2Q15822 529 aa8.86□□□□□ -0.99
RAB5B-201ENST00000360299 GPATCH8Q9UKJ3 1502 aaKnown RBP8.86□□□□□ -0.99
RAB5B-201ENST00000360299 ANKRD30BQ9BXX2 1392 aa8.86□□□□□ -0.99
RAB5B-201ENST00000360299 KCNA6P17658 529 aa8.85□□□□□ -0.99
RAB5B-201ENST00000360299 FBXW7Q969H0 707 aa8.85□□□□□ -0.99
RAB5B-201ENST00000360299 SMG6Q86US8 1419 aaKnown RBP8.85□□□□□ -0.99
RAB5B-201ENST00000360299 NBPF8Q3BBV2 869 aa8.85□□□□□ -0.99
RAB5B-201ENST00000360299 NBPF14Q5TI25 921 aa8.85□□□□□ -0.99
RAB5B-201ENST00000360299 SMC4Q9NTJ3 1288 aa8.85□□□□□ -0.99
RAB5B-201ENST00000360299 FAM177BA6PVY3 158 aa8.84□□□□□ -0.99
RAB5B-201ENST00000360299 FRAT2O75474 233 aaPredicted RBP8.84□□□□□ -0.99
RAB5B-201ENST00000360299 SLAIN2Q9P270 581 aa8.84□□□□□ -0.99
RAB5B-201ENST00000360299 CABLES1Q8TDN4 633 aa8.84□□□□□ -0.99
RAB5B-201ENST00000360299 RIMS2Q9UQ26 1411 aa8.84□□□□□ -0.99
RAB5B-201ENST00000360299 BRD4O60885 1362 aaPredicted RBP8.84□□□□□ -0.99
RAB5B-201ENST00000360299 HMMRO75330 724 aa8.84□□□□□ -0.99
RAB5B-201ENST00000360299 ADCY10Q96PN6 1610 aa8.84□□□□□ -0.99
RAB5B-201ENST00000360299 MCCP23508 829 aa8.84□□□□□ -1
RAB5B-201ENST00000360299 ZNF692Q9BU19 519 aaPredicted RBP8.84□□□□□ -1
RAB5B-201ENST00000360299 NBR1Q14596 966 aa8.83□□□□□ -1
RAB5B-201ENST00000360299 DIAPH1O60610 1272 aaKnown RBP8.83□□□□□ -1
RAB5B-201ENST00000360299 USP21Q9UK80 565 aa8.83□□□□□ -1
RAB5B-201ENST00000360299 EXOC5O00471 708 aa8.83□□□□□ -1
RAB5B-201ENST00000360299 ITPRIPQ8IWB1 547 aa8.83□□□□□ -1
RAB5B-201ENST00000360299 EIF2S2P20042 333 aaKnown RBP8.83□□□□□ -1
RAB5B-201ENST00000360299 CCDC146Q8IYE0 955 aa8.82□□□□□ -1
RAB5B-201ENST00000360299 ABCA8O94911 1581 aa8.82□□□□□ -1
RAB5B-201ENST00000360299 CCDC61Q9Y6R9 512 aa8.82□□□□□ -1
RAB5B-201ENST00000360299 CROCC2H7BZ55 1655 aa8.82□□□□□ -1
RAB5B-201ENST00000360299 PZPP20742 1482 aa8.81□□□□□ -1
RAB5B-201ENST00000360299 KCNH5Q8NCM2 988 aa8.81□□□□□ -1
RAB5B-201ENST00000360299 C11orf95C9JLR9 678 aaPredicted RBP8.81□□□□□ -1
RAB5B-201ENST00000360299 RXRBP28702 533 aa8.81□□□□□ -1
RAB5B-201ENST00000360299 NCOA1Q15788 1441 aa8.81□□□□□ -1
RAB5B-201ENST00000360299 RUNDC1Q96C34 613 aa8.81□□□□□ -1
RAB5B-201ENST00000360299 CDC42BPAQ5VT25 1732 aa8.81□□□□□ -1
RAB5B-201ENST00000360299 CABP4P57796 275 aa8.81□□□□□ -1
RAB5B-201ENST00000360299 HMOX1P09601 288 aa8.8□□□□□ -1
RAB5B-201ENST00000360299 AAMPQ13685 434 aa8.8□□□□□ -1
RAB5B-201ENST00000360299 NBPF1Q3BBV0 1214 aa8.8□□□□□ -1
RAB5B-201ENST00000360299 SPG7Q9UQ90 795 aa8.8□□□□□ -1
RAB5B-201ENST00000360299 ITSN2Q9NZM3 1697 aa8.8□□□□□ -1
RAB5B-201ENST00000360299 PLEKHO1Q53GL0 409 aaPredicted RBP8.8□□□□□ -1
RAB5B-201ENST00000360299 ZNF772Q68DY9 489 aaPredicted RBP8.8□□□□□ -1
RAB5B-201ENST00000360299 DDX17Q92841 729 aaKnown RBP8.8□□□□□ -1
RAB5B-201ENST00000360299 NOP58Q9Y2X3 529 aaKnown RBP8.8□□□□□ -1
RAB5B-201ENST00000360299 KCNJ4P48050 445 aa8.8□□□□□ -1
RAB5B-201ENST00000360299 NECTIN2Q92692 538 aa8.8□□□□□ -1
RAB5B-201ENST00000360299 HSCBQ8IWL3 235 aa8.8□□□□□ -1
RAB5B-201ENST00000360299 ADGBQ8N7X0 1667 aa8.8□□□□□ -1
RAB5B-201ENST00000360299 RPRD2Q5VT52 1461 aaKnown RBP8.79□□□□□ -1
RAB5B-201ENST00000360299 HSP90AB1P08238 724 aaKnown RBP8.79□□□□□ -1
RAB5B-201ENST00000360299 NOS1P29475 1434 aa8.79□□□□□ -1
RAB5B-201ENST00000360299 ADGRF5Q8IZF2 1346 aa8.79□□□□□ -1
RAB5B-201ENST00000360299 APAF1O14727 1248 aa8.79□□□□□ -1
RAB5B-201ENST00000360299 QTRT2Q9H974 415 aaKnown RBP8.79□□□□□ -1
RAB5B-201ENST00000360299 HMGB2P26583 209 aaKnown RBP8.79□□□□□ -1
RAB5B-201ENST00000360299 ZKSCAN2Q63HK3 967 aa8.78□□□□□ -1
RAB5B-201ENST00000360299 BICDL1Q6ZP65 573 aa8.78□□□□□ -1
RAB5B-201ENST00000360299 BAG6P46379 1132 aa8.78□□□□□ -1
RAB5B-201ENST00000360299 GORABQ5T7V8 394 aa8.78□□□□□ -1
RAB5B-201ENST00000360299 WWC3Q9ULE0 1092 aa8.78□□□□□ -1
RAB5B-201ENST00000360299 WASLO00401 505 aaPredicted RBP8.78□□□□□ -1
RAB5B-201ENST00000360299 ACSBG1Q96GR2 724 aa8.78□□□□□ -1
RAB5B-201ENST00000360299 SLC12A5Q9H2X9 1139 aa8.78□□□□□ -1
RAB5B-201ENST00000360299 CENPQQ7L2Z9 268 aaPredicted RBP8.78□□□□□ -1
RAB5B-201ENST00000360299 PHF14O94880 888 aa8.77□□□□□ -1.01
RAB5B-201ENST00000360299 RRP1P56182 461 aaKnown RBP8.77□□□□□ -1.01
RAB5B-201ENST00000360299 FGD1P98174 961 aa8.77□□□□□ -1.01
RAB5B-201ENST00000360299 MPRIPQ6WCQ1 1025 aa8.77□□□□□ -1.01
RAB5B-201ENST00000360299 PAXIP1Q6ZW49 1069 aaPredicted RBP8.77□□□□□ -1.01
RAB5B-201ENST00000360299 TAOK2Q9UL54 1235 aa8.77□□□□□ -1.01
RAB5B-201ENST00000360299 ADGRL2O95490 1459 aa8.77□□□□□ -1.01
RAB5B-201ENST00000360299 CFAP74Q9C0B2 1584 aa8.77□□□□□ -1.01
RAB5B-201ENST00000360299 KIAA1211Q6ZU35 1233 aa8.77□□□□□ -1.01
RAB5B-201ENST00000360299 SLC4A10Q6U841 1118 aa8.77□□□□□ -1.01
RAB5B-201ENST00000360299 GPATCH3Q96I76 525 aa8.77□□□□□ -1.01
RAB5B-201ENST00000360299 BTG4Q9NY30 223 aa8.77□□□□□ -1.01
RAB5B-201ENST00000360299 RRP7AQ9Y3A4 280 aaKnown RBP8.77□□□□□ -1.01
RAB5B-201ENST00000360299 ZCCHC11Q5TAX3 1644 aaKnown RBP8.77□□□□□ -1.01
RAB5B-201ENST00000360299 RRS1Q15050 365 aaKnown RBP8.77□□□□□ -1.01
RAB5B-201ENST00000360299 POLD1P28340 1107 aa8.76□□□□□ -1.01
RAB5B-201ENST00000360299 FAM98CQ17RN3 349 aaKnown RBP8.76□□□□□ -1.01
RAB5B-201ENST00000360299 ZNF530Q6P9A1 599 aaPredicted RBP8.76□□□□□ -1.01
RAB5B-201ENST00000360299 TBX22Q9Y458 520 aa8.76□□□□□ -1.01
RAB5B-201ENST00000360299 ELL2O00472 640 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms