RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 SLC12A5Q9H2X9 1139 aa24.33■■□□□ 1.49
PDLIM7-203ENST00000359895 DLC1Q96QB1 1528 aa24.33■■□□□ 1.49
PDLIM7-203ENST00000359895 ZMYM3Q14202 1370 aa24.33■■□□□ 1.49
PDLIM7-203ENST00000359895 ANKRD36BQ8N2N9 1353 aa24.33■■□□□ 1.49
PDLIM7-203ENST00000359895 SENP3-EIF4A1A0A087X0R7 540 aa24.32■■□□□ 1.48
PDLIM7-203ENST00000359895 NSD2O96028 1365 aa24.31■■□□□ 1.48
PDLIM7-203ENST00000359895 TSHZ2Q9NRE2 1034 aa24.31■■□□□ 1.48
PDLIM7-203ENST00000359895 RIMS1Q86UR5 1692 aaKnown RBP24.31■■□□□ 1.48
PDLIM7-203ENST00000359895 STK26Q9P289 416 aa24.3■■□□□ 1.48
PDLIM7-203ENST00000359895 CGNL1Q0VF96 1302 aa24.3■■□□□ 1.48
PDLIM7-203ENST00000359895 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.29■■□□□ 1.48
PDLIM7-203ENST00000359895 POLR3AO14802 1390 aaPredicted RBP24.29■■□□□ 1.48
PDLIM7-203ENST00000359895 ATAD2Q6PL18 1390 aa24.29■■□□□ 1.48
PDLIM7-203ENST00000359895 SALL2Q9Y467 1007 aaPredicted RBP24.29■■□□□ 1.48
PDLIM7-203ENST00000359895 MORC1Q86VD1 984 aa24.28■■□□□ 1.48
PDLIM7-203ENST00000359895 POGKQ9P215 609 aa24.28■■□□□ 1.48
PDLIM7-203ENST00000359895 PRAM1Q96QH2 718 aa24.25■■□□□ 1.47
PDLIM7-203ENST00000359895 NRXN3Q9Y4C0 1643 aa24.25■■□□□ 1.47
PDLIM7-203ENST00000359895 TNRQ92752 1358 aa24.25■■□□□ 1.47
PDLIM7-203ENST00000359895 HDGFP51858 240 aaKnown RBP24.25■■□□□ 1.47
PDLIM7-203ENST00000359895 RCAN3Q9UKA8 241 aa24.25■■□□□ 1.47
PDLIM7-203ENST00000359895 ANKRD26Q9UPS8 1709 aa24.24■■□□□ 1.47
PDLIM7-203ENST00000359895 UBR1Q8IWV7 1749 aa24.24■■□□□ 1.47
PDLIM7-203ENST00000359895 CABP2Q9NPB3 220 aa24.24■■□□□ 1.47
PDLIM7-203ENST00000359895 SHPRHQ149N8 1683 aa24.23■■□□□ 1.47
PDLIM7-203ENST00000359895 SRPK2P78362 688 aaKnown RBP24.23■■□□□ 1.47
PDLIM7-203ENST00000359895 SAFB2Q14151 953 aaKnown RBP eCLIP24.23■■□□□ 1.47
PDLIM7-203ENST00000359895 NGEFQ8N5V2 710 aa24.23■■□□□ 1.47
PDLIM7-203ENST00000359895 KNDC1Q76NI1 1749 aa24.23■■□□□ 1.47
PDLIM7-203ENST00000359895 MINK1Q8N4C8 1332 aaPredicted RBP24.2■■□□□ 1.47
PDLIM7-203ENST00000359895 ABCC11Q96J66 1382 aa24.2■■□□□ 1.46
PDLIM7-203ENST00000359895 RRP1P56182 461 aaKnown RBP24.2■■□□□ 1.46
PDLIM7-203ENST00000359895 CDCA7LQ96GN5 454 aa24.2■■□□□ 1.46
PDLIM7-203ENST00000359895 TERF2IPQ9NYB0 399 aa24.18■■□□□ 1.46
PDLIM7-203ENST00000359895 ZNF521Q96K83 1311 aa24.18■■□□□ 1.46
PDLIM7-203ENST00000359895 SENP3Q9H4L4 574 aaPredicted RBP24.17■■□□□ 1.46
PDLIM7-203ENST00000359895 A0A1W2PP64 1363 aa24.17■■□□□ 1.46
PDLIM7-203ENST00000359895 PLEKHH1Q9ULM0 1364 aa24.17■■□□□ 1.46
PDLIM7-203ENST00000359895 MED14O60244 1454 aa24.16■■□□□ 1.46
PDLIM7-203ENST00000359895 C3P01024 1663 aa24.16■■□□□ 1.46
PDLIM7-203ENST00000359895 KIF20BQ96Q89 1820 aa24.15■■□□□ 1.46
PDLIM7-203ENST00000359895 NLRP1Q9C000 1473 aa24.15■■□□□ 1.46
PDLIM7-203ENST00000359895 CFAP53Q96M91 514 aa24.15■■□□□ 1.46
PDLIM7-203ENST00000359895 GOLGA2Q08379 1002 aa24.14■■□□□ 1.45
PDLIM7-203ENST00000359895 B4GALNT3Q6L9W6 998 aa24.14■■□□□ 1.45
PDLIM7-203ENST00000359895 PLPPR3Q6T4P5 718 aa24.13■■□□□ 1.45
PDLIM7-203ENST00000359895 CDK19Q9BWU1 502 aa24.13■■□□□ 1.45
PDLIM7-203ENST00000359895 CD163L1Q9NR16 1453 aa24.12■■□□□ 1.45
PDLIM7-203ENST00000359895 TMEM2Q9UHN6 1383 aa24.12■■□□□ 1.45
PDLIM7-203ENST00000359895 HDGFL2Q7Z4V5 671 aaPredicted RBP24.12■■□□□ 1.45
PDLIM7-203ENST00000359895 SIRT1Q96EB6 747 aa24.12■■□□□ 1.45
PDLIM7-203ENST00000359895 TECPR2O15040 1411 aa24.11■■□□□ 1.45
PDLIM7-203ENST00000359895 FAM135BQ49AJ0 1406 aa24.11■■□□□ 1.45
PDLIM7-203ENST00000359895 CPS1P31327 1500 aa24.1■■□□□ 1.45
PDLIM7-203ENST00000359895 ATP7BP35670 1465 aa24.1■■□□□ 1.45
PDLIM7-203ENST00000359895 CCDC146Q8IYE0 955 aa24.1■■□□□ 1.45
PDLIM7-203ENST00000359895 APAF1O14727 1248 aa24.08■■□□□ 1.45
PDLIM7-203ENST00000359895 TNNT2P45379 298 aaPredicted RBP24.08■■□□□ 1.45
PDLIM7-203ENST00000359895 MTHFSP49914 203 aa24.08■■□□□ 1.45
PDLIM7-203ENST00000359895 DUSP27Q5VZP5 1158 aa24.08■■□□□ 1.44
PDLIM7-203ENST00000359895 CCDC136Q96JN2 1154 aa24.08■■□□□ 1.44
PDLIM7-203ENST00000359895 CEBPAP49715 358 aaPredicted RBP24.07■■□□□ 1.44
PDLIM7-203ENST00000359895 METP08581 1390 aa24.07■■□□□ 1.44
PDLIM7-203ENST00000359895 SLFN5Q08AF3 891 aa24.06■■□□□ 1.44
PDLIM7-203ENST00000359895 TRMT2AQ8IZ69 625 aaKnown RBP24.05■■□□□ 1.44
PDLIM7-203ENST00000359895 RUNDC1Q96C34 613 aa24.05■■□□□ 1.44
PDLIM7-203ENST00000359895 WAPLQ7Z5K2 1190 aa24.04■■□□□ 1.44
PDLIM7-203ENST00000359895 PLEKHG1Q9ULL1 1385 aa24.03■■□□□ 1.44
PDLIM7-203ENST00000359895 IQSEC2Q5JU85 1478 aa24.02■■□□□ 1.44
PDLIM7-203ENST00000359895 E9PSI1 815 aa24.02■■□□□ 1.44
PDLIM7-203ENST00000359895 NCBP3Q53F19 620 aaKnown RBP24.02■■□□□ 1.44
PDLIM7-203ENST00000359895 CABP1Q9NZU7 370 aa24.02■■□□□ 1.44
PDLIM7-203ENST00000359895 FYB1O15117 783 aa24.01■■□□□ 1.43
PDLIM7-203ENST00000359895 WASLO00401 505 aaPredicted RBP24■■□□□ 1.43
PDLIM7-203ENST00000359895 NKTRP30414 1462 aaKnown RBP24■■□□□ 1.43
PDLIM7-203ENST00000359895 ADAMTS13Q76LX8 1427 aa23.99■■□□□ 1.43
PDLIM7-203ENST00000359895 SLIT1O75093 1534 aa23.99■■□□□ 1.43
PDLIM7-203ENST00000359895 GGNBP2Q9H3C7 697 aa23.99■■□□□ 1.43
PDLIM7-203ENST00000359895 ITSN1Q15811 1721 aa23.98■■□□□ 1.43
PDLIM7-203ENST00000359895 ADGRB2O60241 1585 aa23.98■■□□□ 1.43
PDLIM7-203ENST00000359895 AKAP12Q02952 1782 aa23.97■■□□□ 1.43
PDLIM7-203ENST00000359895 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.97■■□□□ 1.43
PDLIM7-203ENST00000359895 EXOC6Q8TAG9 804 aa23.97■■□□□ 1.43
PDLIM7-203ENST00000359895 RBM19Q9Y4C8 960 aaKnown RBP23.97■■□□□ 1.43
PDLIM7-203ENST00000359895 MON2Q7Z3U7 1717 aa23.97■■□□□ 1.43
PDLIM7-203ENST00000359895 COL3A1P02461 1466 aaPredicted RBP23.97■■□□□ 1.43
PDLIM7-203ENST00000359895 ARHGAP23Q9P227 1491 aa23.97■■□□□ 1.43
PDLIM7-203ENST00000359895 TXNDC2Q86VQ3 553 aa23.96■■□□□ 1.43
PDLIM7-203ENST00000359895 CDC42BPGQ6DT37 1551 aa23.96■■□□□ 1.43
PDLIM7-203ENST00000359895 CPSF1Q10570 1443 aaKnown RBP23.95■■□□□ 1.43
PDLIM7-203ENST00000359895 EDC4Q6P2E9 1401 aaKnown RBP23.95■■□□□ 1.42
PDLIM7-203ENST00000359895 PPIP5K1Q6PFW1 1433 aa23.95■■□□□ 1.42
PDLIM7-203ENST00000359895 WWC1Q8IX03 1113 aa23.95■■□□□ 1.42
PDLIM7-203ENST00000359895 EID1Q9Y6B2 187 aa23.95■■□□□ 1.42
PDLIM7-203ENST00000359895 CCDC27Q2M243 656 aa23.94■■□□□ 1.42
PDLIM7-203ENST00000359895 TCP11L2Q8N4U5 519 aa23.93■■□□□ 1.42
PDLIM7-203ENST00000359895 DIP2AQ14689 1571 aa23.92■■□□□ 1.42
PDLIM7-203ENST00000359895 WDR63Q8IWG1 891 aa23.91■■□□□ 1.42
PDLIM7-203ENST00000359895 PHF23Q9BUL5 403 aaPredicted RBP23.91■■□□□ 1.42
PDLIM7-203ENST00000359895 MAP2P11137 1827 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms