RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 FOXD1Q16676 465 aa34.6■■■■□ 3.13
YIF1A-201ENST00000359461 MARF1Q9Y4F3 1742 aaKnown RBP34.59■■■■□ 3.13
YIF1A-201ENST00000359461 ADGRF5Q8IZF2 1346 aa34.58■■■■□ 3.13
YIF1A-201ENST00000359461 RBM6P78332 1123 aaKnown RBP34.58■■■■□ 3.13
YIF1A-201ENST00000359461 PXDNQ92626 1479 aa34.58■■■■□ 3.13
YIF1A-201ENST00000359461 QTRT2Q9H974 415 aaKnown RBP34.57■■■■□ 3.12
YIF1A-201ENST00000359461 ANKRD30BQ9BXX2 1392 aa34.56■■■■□ 3.12
YIF1A-201ENST00000359461 MYOM2P54296 1465 aa34.55■■■■□ 3.12
YIF1A-201ENST00000359461 PIK3C2GO75747 1445 aa34.55■■■■□ 3.12
YIF1A-201ENST00000359461 ADAMTS2O95450 1211 aa34.54■■■■□ 3.12
YIF1A-201ENST00000359461 FMN2Q9NZ56 1722 aa34.53■■■■□ 3.12
YIF1A-201ENST00000359461 LRPPRCP42704 1394 aaKnown RBP34.53■■■■□ 3.12
YIF1A-201ENST00000359461 NGLY1Q96IV0 654 aa34.52■■■■□ 3.12
YIF1A-201ENST00000359461 NPHP3Q7Z494 1330 aa34.51■■■■□ 3.11
YIF1A-201ENST00000359461 ABCC11Q96J66 1382 aa34.49■■■■□ 3.11
YIF1A-201ENST00000359461 MPHOSPH9Q99550 1183 aa34.48■■■■□ 3.11
YIF1A-201ENST00000359461 KIF1AQ12756 1690 aa34.47■■■■□ 3.11
YIF1A-201ENST00000359461 FNBP4Q8N3X1 1017 aaPredicted RBP34.46■■■■□ 3.11
YIF1A-201ENST00000359461 ATRNO75882 1429 aa34.46■■■■□ 3.11
YIF1A-201ENST00000359461 RGL3Q3MIN7 710 aa34.45■■■■□ 3.11
YIF1A-201ENST00000359461 ESCO1Q5FWF5 840 aa34.45■■■■□ 3.11
YIF1A-201ENST00000359461 USP21Q9UK80 565 aa34.43■■■■□ 3.1
YIF1A-201ENST00000359461 PLEKHH1Q9ULM0 1364 aa34.43■■■■□ 3.1
YIF1A-201ENST00000359461 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.42■■■■□ 3.1
YIF1A-201ENST00000359461 NRXN1Q9ULB1 1477 aa34.42■■■■□ 3.1
YIF1A-201ENST00000359461 YTHDC2Q9H6S0 1430 aaKnown RBP34.42■■■■□ 3.1
YIF1A-201ENST00000359461 WAPLQ7Z5K2 1190 aa34.42■■■■□ 3.1
YIF1A-201ENST00000359461 STK26Q9P289 416 aa34.41■■■■□ 3.1
YIF1A-201ENST00000359461 TRPC5Q9UL62 973 aaPredicted RBP34.4■■■■□ 3.1
YIF1A-201ENST00000359461 RGPD8O14715 1765 aaPredicted RBP34.39■■■■□ 3.1
YIF1A-201ENST00000359461 BCL9LQ86UU0 1499 aa34.38■■■■□ 3.09
YIF1A-201ENST00000359461 FOXO3O43524 673 aa34.37■■■■□ 3.09
YIF1A-201ENST00000359461 TMEM132EQ6IEE7 984 aa34.37■■■■□ 3.09
YIF1A-201ENST00000359461 ATAD2Q6PL18 1390 aa34.35■■■■□ 3.09
YIF1A-201ENST00000359461 XPCQ01831 940 aaPredicted RBP34.34■■■■□ 3.09
YIF1A-201ENST00000359461 ACIN1Q9UKV3 1341 aaKnown RBP34.33■■■■□ 3.09
YIF1A-201ENST00000359461 SIRT1Q96EB6 747 aa34.32■■■■□ 3.08
YIF1A-201ENST00000359461 EP400Q96L91 3159 aa34.31■■■■□ 3.08
YIF1A-201ENST00000359461 USP32Q8NFA0 1604 aa34.3■■■■□ 3.08
YIF1A-201ENST00000359461 NUTM2FA1L443 756 aa34.3■■■■□ 3.08
YIF1A-201ENST00000359461 C14orf93Q9H972 538 aaKnown RBP34.29■■■■□ 3.08
YIF1A-201ENST00000359461 SPATA31A3Q5VYP0 1347 aa34.27■■■■□ 3.08
YIF1A-201ENST00000359461 ABCA3Q99758 1704 aa34.27■■■■□ 3.08
YIF1A-201ENST00000359461 SLIT2O94813 1529 aa34.26■■■■□ 3.08
YIF1A-201ENST00000359461 DLC1Q96QB1 1528 aa34.25■■■■□ 3.07
YIF1A-201ENST00000359461 ADGRB2O60241 1585 aa34.23■■■■□ 3.07
YIF1A-201ENST00000359461 GLI3P10071 1580 aa34.23■■■■□ 3.07
YIF1A-201ENST00000359461 DHX57Q6P158 1386 aaKnown RBP34.22■■■■□ 3.07
YIF1A-201ENST00000359461 TNS3Q68CZ2 1445 aa34.21■■■■□ 3.07
YIF1A-201ENST00000359461 ADGRB1O14514 1584 aa34.19■■■■□ 3.06
YIF1A-201ENST00000359461 PLCH1Q4KWH8 1693 aa34.19■■■■□ 3.06
YIF1A-201ENST00000359461 CFAP70Q5T0N1 1121 aa34.19■■■■□ 3.06
YIF1A-201ENST00000359461 NWD2Q9ULI1 1742 aa34.18■■■■□ 3.06
YIF1A-201ENST00000359461 GJD4Q96KN9 370 aaPredicted RBP34.18■■■■□ 3.06
YIF1A-201ENST00000359461 RALGAPBQ86X10 1494 aa34.16■■■■□ 3.06
YIF1A-201ENST00000359461 KRT28Q7Z3Y7 464 aa34.16■■■■□ 3.06
YIF1A-201ENST00000359461 BRWD3Q6RI45 1802 aa34.16■■■■□ 3.06
YIF1A-201ENST00000359461 PHF8Q9UPP1 1060 aa34.15■■■■□ 3.06
YIF1A-201ENST00000359461 RAB3GAP2Q9H2M9 1393 aa34.14■■■■□ 3.06
YIF1A-201ENST00000359461 ANKARQ7Z5J8 1434 aa34.13■■■■□ 3.05
YIF1A-201ENST00000359461 SBNO1A3KN83 1393 aa34.13■■■■□ 3.05
YIF1A-201ENST00000359461 UNC5CLQ8IV45 518 aa34.13■■■■□ 3.05
YIF1A-201ENST00000359461 TRPM3Q9HCF6 1732 aaPredicted RBP34.13■■■■□ 3.05
YIF1A-201ENST00000359461 PRAM1Q96QH2 718 aa34.12■■■■□ 3.05
YIF1A-201ENST00000359461 ALS2Q96Q42 1657 aa34.07■■■■□ 3.04
YIF1A-201ENST00000359461 PSME1Q06323 249 aa34.07■■■■□ 3.04
YIF1A-201ENST00000359461 ARHGEF10O15013 1369 aa34.07■■■■□ 3.04
YIF1A-201ENST00000359461 SRCAPQ6ZRS2 3230 aa34.06■■■■□ 3.04
YIF1A-201ENST00000359461 CCDC125Q86Z20 511 aa34.06■■■■□ 3.04
YIF1A-201ENST00000359461 SAFB2Q14151 953 aaKnown RBP eCLIP34.05■■■■□ 3.04
YIF1A-201ENST00000359461 NRAPQ86VF7 1730 aa34.04■■■■□ 3.04
YIF1A-201ENST00000359461 TULP4Q9NRJ4 1543 aa34.01■■■■□ 3.04
YIF1A-201ENST00000359461 CABLES1Q8TDN4 633 aa34.01■■■■□ 3.03
YIF1A-201ENST00000359461 CRYBG1Q9Y4K1 1723 aa34.01■■■■□ 3.03
YIF1A-201ENST00000359461 POGKQ9P215 609 aa34■■■■□ 3.03
YIF1A-201ENST00000359461 ARHGEF28Q8N1W1 1705 aaKnown RBP33.99■■■■□ 3.03
YIF1A-201ENST00000359461 BLMP54132 1417 aaPredicted RBP33.98■■■■□ 3.03
YIF1A-201ENST00000359461 VPS72Q15906 364 aa33.98■■■■□ 3.03
YIF1A-201ENST00000359461 HAP1P54257 671 aaPredicted RBP33.97■■■■□ 3.03
YIF1A-201ENST00000359461 EIF3AQ14152 1382 aaKnown RBP33.97■■■■□ 3.03
YIF1A-201ENST00000359461 ITSN1Q15811 1721 aa33.95■■■■□ 3.03
YIF1A-201ENST00000359461 COL14A1Q05707 1796 aaKnown RBP33.94■■■■□ 3.02
YIF1A-201ENST00000359461 PMFBP1Q8TBY8 1022 aa33.94■■■■□ 3.02
YIF1A-201ENST00000359461 ZRANB1Q9UGI0 708 aa33.94■■■■□ 3.02
YIF1A-201ENST00000359461 TRAK1Q9UPV9 953 aa33.93■■■■□ 3.02
YIF1A-201ENST00000359461 PRR36Q9H6K5 1346 aa33.93■■■■□ 3.02
YIF1A-201ENST00000359461 ONECUT3O60422 494 aaPredicted RBP33.92■■■■□ 3.02
YIF1A-201ENST00000359461 LMOD2Q6P5Q4 547 aa33.9■■■■□ 3.02
YIF1A-201ENST00000359461 SEPT12Q8IYM1 358 aa33.9■■■■□ 3.02
YIF1A-201ENST00000359461 STAC3Q96MF2 364 aa33.9■■■■□ 3.02
YIF1A-201ENST00000359461 HIRIP3Q9BW71 556 aaPredicted RBP33.9■■■■□ 3.02
YIF1A-201ENST00000359461 MINK1Q8N4C8 1332 aaPredicted RBP33.88■■■■□ 3.01
YIF1A-201ENST00000359461 FAM83GA6ND36 823 aa33.87■■■■□ 3.01
YIF1A-201ENST00000359461 DCAF11Q8TEB1 546 aa33.87■■■■□ 3.01
YIF1A-201ENST00000359461 GPRASP1Q5JY77 1395 aa33.86■■■■□ 3.01
YIF1A-201ENST00000359461 ATP7BP35670 1465 aa33.85■■■■□ 3.01
YIF1A-201ENST00000359461 WASLO00401 505 aaPredicted RBP33.85■■■■□ 3.01
YIF1A-201ENST00000359461 PLEKHG5O94827 1062 aa33.85■■■■□ 3.01
YIF1A-201ENST00000359461 KDM2AQ9Y2K7 1162 aa33.84■■■■□ 3.01
YIF1A-201ENST00000359461 HRCP23327 699 aa33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms