RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 C14orf37Q86TY3 774 aa21.48■■□□□ 1.03
TPM1-206ENST00000358278 ADGRL3Q9HAR2 1447 aa21.45■■□□□ 1.02
TPM1-206ENST00000358278 ADGRB2O60241 1585 aa21.45■■□□□ 1.02
TPM1-206ENST00000358278 ST20-MTHFSA0A0A6YYL1 179 aa21.45■■□□□ 1.02
TPM1-206ENST00000358278 NCOA3Q9Y6Q9 1424 aa21.45■■□□□ 1.02
TPM1-206ENST00000358278 MINK1Q8N4C8 1332 aaPredicted RBP21.44■■□□□ 1.02
TPM1-206ENST00000358278 HSPA5P11021 654 aaKnown RBP21.43■■□□□ 1.02
TPM1-206ENST00000358278 CDC42BPGQ6DT37 1551 aa21.42■■□□□ 1.02
TPM1-206ENST00000358278 MSH6P52701 1360 aa21.42■■□□□ 1.02
TPM1-206ENST00000358278 HIRIP3Q9BW71 556 aaPredicted RBP21.41■■□□□ 1.02
TPM1-206ENST00000358278 SBNO2Q9Y2G9 1366 aa21.4■■□□□ 1.02
TPM1-206ENST00000358278 FMN2Q9NZ56 1722 aa21.4■■□□□ 1.02
TPM1-206ENST00000358278 RGPD8O14715 1765 aaPredicted RBP21.38■■□□□ 1.01
TPM1-206ENST00000358278 C19orf44Q9H6X5 657 aa21.38■■□□□ 1.01
TPM1-206ENST00000358278 TULP4Q9NRJ4 1543 aa21.38■■□□□ 1.01
TPM1-206ENST00000358278 DCCP43146 1447 aa21.37■■□□□ 1.01
TPM1-206ENST00000358278 IQSEC2Q5JU85 1478 aa21.37■■□□□ 1.01
TPM1-206ENST00000358278 TESK2Q96S53 571 aa21.36■■□□□ 1.01
TPM1-206ENST00000358278 SLC24A1O60721 1099 aa21.35■■□□□ 1.01
TPM1-206ENST00000358278 ATF3P18847 181 aa21.35■■□□□ 1.01
TPM1-206ENST00000358278 ITSN1Q15811 1721 aa21.34■■□□□ 1.01
TPM1-206ENST00000358278 EVC2Q86UK5 1308 aa21.34■■□□□ 1.01
TPM1-206ENST00000358278 CERKQ8TCT0 537 aa21.33■■□□□ 1.01
TPM1-206ENST00000358278 WASLO00401 505 aaPredicted RBP21.32■■□□□ 1
TPM1-206ENST00000358278 TMF1P82094 1093 aa21.32■■□□□ 1
TPM1-206ENST00000358278 CADPS2Q86UW7 1296 aa21.32■■□□□ 1
TPM1-206ENST00000358278 PHF23Q9BUL5 403 aaPredicted RBP21.32■■□□□ 1
TPM1-206ENST00000358278 USP32Q8NFA0 1604 aa21.31■■□□□ 1
TPM1-206ENST00000358278 SRPK2P78362 688 aaKnown RBP21.3■■□□□ 1
TPM1-206ENST00000358278 CDK19Q9BWU1 502 aa21.3■■□□□ 1
TPM1-206ENST00000358278 DISP3Q9P2K9 1392 aa21.3■■□□□ 1
TPM1-206ENST00000358278 NUTM2FA1L443 756 aa21.29■■□□□ 1
TPM1-206ENST00000358278 TOPAZ1Q8N9V7 1692 aa21.28■■□□□ 1
TPM1-206ENST00000358278 CABP2Q9NPB3 220 aa21.27■■□□□ 1
TPM1-206ENST00000358278 ATP7BP35670 1465 aa21.27■■□□□ 1
TPM1-206ENST00000358278 MST1RQ04912 1400 aa21.27■■□□□ 1
TPM1-206ENST00000358278 ANKARQ7Z5J8 1434 aa21.27■■□□□ 1
TPM1-206ENST00000358278 CDCA8Q53HL2 280 aa21.26■□□□□ 0.99
TPM1-206ENST00000358278 C1orf167Q5SNV9 1468 aa21.24■□□□□ 0.99
TPM1-206ENST00000358278 MYOM1P52179 1685 aa21.23■□□□□ 0.99
TPM1-206ENST00000358278 KIF1AQ12756 1690 aa21.23■□□□□ 0.99
TPM1-206ENST00000358278 ATAD2Q6PL18 1390 aa21.23■□□□□ 0.99
TPM1-206ENST00000358278 TOM1O60784 492 aa21.23■□□□□ 0.99
TPM1-206ENST00000358278 POLR3GLQ9BT43 218 aa21.23■□□□□ 0.99
TPM1-206ENST00000358278 PRR36Q9H6K5 1346 aa21.22■□□□□ 0.99
TPM1-206ENST00000358278 NUDT16Q96DE0 195 aaKnown RBP21.22■□□□□ 0.99
TPM1-206ENST00000358278 SLAIN2Q9P270 581 aa21.22■□□□□ 0.99
TPM1-206ENST00000358278 ROBO1Q9Y6N7 1651 aa21.22■□□□□ 0.99
TPM1-206ENST00000358278 UBAP1LF5GYI3 381 aa21.21■□□□□ 0.99
TPM1-206ENST00000358278 PUS7Q96PZ0 661 aaKnown RBP21.2■□□□□ 0.98
TPM1-206ENST00000358278 PPIP5K1Q6PFW1 1433 aa21.2■□□□□ 0.98
TPM1-206ENST00000358278 C11orf95C9JLR9 678 aaPredicted RBP21.19■□□□□ 0.98
TPM1-206ENST00000358278 ESCO1Q5FWF5 840 aa21.19■□□□□ 0.98
TPM1-206ENST00000358278 CCDC61Q9Y6R9 512 aa21.18■□□□□ 0.98
TPM1-206ENST00000358278 KIF7Q2M1P5 1343 aa21.18■□□□□ 0.98
TPM1-206ENST00000358278 AKAP12Q02952 1782 aa21.18■□□□□ 0.98
TPM1-206ENST00000358278 SCAF1Q9H7N4 1312 aaKnown RBP21.17■□□□□ 0.98
TPM1-206ENST00000358278 CCDC7Q96M83 1385 aa21.16■□□□□ 0.98
TPM1-206ENST00000358278 TMC1Q8TDI8 760 aa21.16■□□□□ 0.98
TPM1-206ENST00000358278 ORAI2Q96SN7 254 aa21.16■□□□□ 0.98
TPM1-206ENST00000358278 NINLQ9Y2I6 1382 aa21.15■□□□□ 0.98
TPM1-206ENST00000358278 PIP4K2BP78356 416 aa21.15■□□□□ 0.98
TPM1-206ENST00000358278 PHF8Q9UPP1 1060 aa21.15■□□□□ 0.98
TPM1-206ENST00000358278 WASHC2AQ641Q2 1341 aa21.15■□□□□ 0.98
TPM1-206ENST00000358278 NHSL1Q5SYE7 1610 aa21.14■□□□□ 0.98
TPM1-206ENST00000358278 BRINP3Q76B58 766 aa21.13■□□□□ 0.97
TPM1-206ENST00000358278 PMFBP1Q8TBY8 1022 aa21.13■□□□□ 0.97
TPM1-206ENST00000358278 CABP1Q9NZU7 370 aa21.13■□□□□ 0.97
TPM1-206ENST00000358278 MON2Q7Z3U7 1717 aa21.13■□□□□ 0.97
TPM1-206ENST00000358278 ZNF316A6NFI3 1004 aaPredicted RBP21.12■□□□□ 0.97
TPM1-206ENST00000358278 NGDNQ8NEJ9 315 aaKnown RBP21.11■□□□□ 0.97
TPM1-206ENST00000358278 SLC12A5Q9H2X9 1139 aa21.1■□□□□ 0.97
TPM1-206ENST00000358278 PHLPP1O60346 1717 aa21.1■□□□□ 0.97
TPM1-206ENST00000358278 PLEKHG3A1L390 1219 aa21.09■□□□□ 0.97
TPM1-206ENST00000358278 ACEP12821 1306 aa21.09■□□□□ 0.97
TPM1-206ENST00000358278 POLR3AO14802 1390 aaPredicted RBP21.08■□□□□ 0.97
TPM1-206ENST00000358278 AHDC1Q5TGY3 1603 aaPredicted RBP21.07■□□□□ 0.96
TPM1-206ENST00000358278 FOXO3O43524 673 aa21.07■□□□□ 0.96
TPM1-206ENST00000358278 TERF2IPQ9NYB0 399 aa21.07■□□□□ 0.96
TPM1-206ENST00000358278 CD163L1Q9NR16 1453 aa21.07■□□□□ 0.96
TPM1-206ENST00000358278 NPHP3Q7Z494 1330 aa21.07■□□□□ 0.96
TPM1-206ENST00000358278 HDGFL2Q7Z4V5 671 aaPredicted RBP21.07■□□□□ 0.96
TPM1-206ENST00000358278 A0A1W2PP64 1363 aa21.06■□□□□ 0.96
TPM1-206ENST00000358278 ANKRD36BQ8N2N9 1353 aa21.06■□□□□ 0.96
TPM1-206ENST00000358278 NRKQ7Z2Y5 1582 aa21.06■□□□□ 0.96
TPM1-206ENST00000358278 CPSF1Q10570 1443 aaKnown RBP21.05■□□□□ 0.96
TPM1-206ENST00000358278 TRPM3Q9HCF6 1732 aaPredicted RBP21.05■□□□□ 0.96
TPM1-206ENST00000358278 KTN1Q86UP2 1357 aaKnown RBP21.05■□□□□ 0.96
TPM1-206ENST00000358278 PSME1Q06323 249 aa21.04■□□□□ 0.96
TPM1-206ENST00000358278 DDX17Q92841 729 aaKnown RBP21.04■□□□□ 0.96
TPM1-206ENST00000358278 USP6P35125 1406 aa21.03■□□□□ 0.96
TPM1-206ENST00000358278 XPCQ01831 940 aaPredicted RBP21.03■□□□□ 0.96
TPM1-206ENST00000358278 ZNF692Q9BU19 519 aaPredicted RBP21.03■□□□□ 0.96
TPM1-206ENST00000358278 PXDNQ92626 1479 aa21.03■□□□□ 0.96
TPM1-206ENST00000358278 KIF20BQ96Q89 1820 aa21.02■□□□□ 0.96
TPM1-206ENST00000358278 COL16A1Q07092 1604 aaPredicted RBP21.01■□□□□ 0.95
TPM1-206ENST00000358278 PANK3Q9H999 370 aa21.01■□□□□ 0.95
TPM1-206ENST00000358278 KRT28Q7Z3Y7 464 aa21■□□□□ 0.95
TPM1-206ENST00000358278 EDC4Q6P2E9 1401 aaKnown RBP21■□□□□ 0.95
TPM1-206ENST00000358278 ALS2Q96Q42 1657 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms