RNA–Protein interactions for RNA: ENST00000357895.9

NEDD4L-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEDD4L, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-203ENST00000357895 VSIG10Q8N0Z9 540 aa11.93□□□□□ -0.5
NEDD4L-203ENST00000357895 ANP32BQ92688 251 aaKnown RBP11.93□□□□□ -0.5
NEDD4L-203ENST00000357895 STAC3Q96MF2 364 aa11.93□□□□□ -0.5
NEDD4L-203ENST00000357895 ABCA8O94911 1581 aa11.93□□□□□ -0.5
NEDD4L-203ENST00000357895 SAFB2Q14151 953 aaKnown RBP eCLIP11.93□□□□□ -0.5
NEDD4L-203ENST00000357895 WDR63Q8IWG1 891 aa11.93□□□□□ -0.5
NEDD4L-203ENST00000357895 LNPKQ9C0E8 428 aa11.93□□□□□ -0.5
NEDD4L-203ENST00000357895 GRPEL1Q9HAV7 217 aa11.92□□□□□ -0.5
NEDD4L-203ENST00000357895 GBP4Q96PP9 640 aa11.92□□□□□ -0.5
NEDD4L-203ENST00000357895 ADGRF5Q8IZF2 1346 aa11.92□□□□□ -0.5
NEDD4L-203ENST00000357895 NPC1L1Q9UHC9 1359 aa11.92□□□□□ -0.5
NEDD4L-203ENST00000357895 EXOSC9Q06265 439 aaKnown RBP11.91□□□□□ -0.5
NEDD4L-203ENST00000357895 NSD3Q9BZ95 1437 aa11.91□□□□□ -0.5
NEDD4L-203ENST00000357895 SCAPERQ9BY12 1400 aa11.91□□□□□ -0.5
NEDD4L-203ENST00000357895 ABCC2Q92887 1545 aa11.91□□□□□ -0.5
NEDD4L-203ENST00000357895 NCLP19338 710 aaKnown RBP11.9□□□□□ -0.5
NEDD4L-203ENST00000357895 DDX19BQ9UMR2 479 aa11.9□□□□□ -0.5
NEDD4L-203ENST00000357895 TMEM132EQ6IEE7 984 aa11.9□□□□□ -0.5
NEDD4L-203ENST00000357895 GOLGA6L22H0YM25 854 aa11.89□□□□□ -0.51
NEDD4L-203ENST00000357895 CLCN1P35523 988 aa11.89□□□□□ -0.51
NEDD4L-203ENST00000357895 ESPNB1AK53 854 aa11.89□□□□□ -0.51
NEDD4L-203ENST00000357895 DUOX2Q9NRD8 1548 aa11.89□□□□□ -0.51
NEDD4L-203ENST00000357895 POLR3AO14802 1390 aaPredicted RBP11.89□□□□□ -0.51
NEDD4L-203ENST00000357895 NUTM2DQ5VT03 806 aaPredicted RBP11.89□□□□□ -0.51
NEDD4L-203ENST00000357895 LAMC1P11047 1609 aa11.89□□□□□ -0.51
NEDD4L-203ENST00000357895 SYNMO15061 1565 aa11.89□□□□□ -0.51
NEDD4L-203ENST00000357895 CLASP1Q7Z460 1538 aa11.88□□□□□ -0.51
NEDD4L-203ENST00000357895 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
NEDD4L-203ENST00000357895 FSD2A1L4K1 749 aa11.87□□□□□ -0.51
NEDD4L-203ENST00000357895 TRIM27P14373 513 aa11.87□□□□□ -0.51
NEDD4L-203ENST00000357895 MYO5CQ9NQX4 1742 aa11.87□□□□□ -0.51
NEDD4L-203ENST00000357895 IPO8O15397 1037 aaKnown RBP11.87□□□□□ -0.51
NEDD4L-203ENST00000357895 ANKRD45Q5TZF3 282 aa11.87□□□□□ -0.51
NEDD4L-203ENST00000357895 SSH1Q8WYL5 1049 aa11.87□□□□□ -0.51
NEDD4L-203ENST00000357895 MAST1Q9Y2H9 1570 aa11.86□□□□□ -0.51
NEDD4L-203ENST00000357895 ATF7IPQ6VMQ6 1270 aa11.86□□□□□ -0.51
NEDD4L-203ENST00000357895 TMEM57Q8N5G2 664 aa11.86□□□□□ -0.51
NEDD4L-203ENST00000357895 TNPO1Q92973 898 aaKnown RBP11.86□□□□□ -0.51
NEDD4L-203ENST00000357895 UNC13BO14795 1591 aa11.85□□□□□ -0.51
NEDD4L-203ENST00000357895 TRAPPC8Q9Y2L5 1435 aa11.84□□□□□ -0.51
NEDD4L-203ENST00000357895 CDC42BPBQ9Y5S2 1711 aa11.84□□□□□ -0.51
NEDD4L-203ENST00000357895 PREX2Q70Z35 1606 aa11.84□□□□□ -0.51
NEDD4L-203ENST00000357895 IQGAP3Q86VI3 1631 aa11.84□□□□□ -0.51
NEDD4L-203ENST00000357895 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
NEDD4L-203ENST00000357895 ATP10AO60312 1499 aa11.84□□□□□ -0.51
NEDD4L-203ENST00000357895 NLRP1Q9C000 1473 aa11.84□□□□□ -0.51
NEDD4L-203ENST00000357895 SRPK2P78362 688 aaKnown RBP11.84□□□□□ -0.51
NEDD4L-203ENST00000357895 RIPK4P57078 832 aa11.83□□□□□ -0.51
NEDD4L-203ENST00000357895 PKNOX2Q96KN3 472 aa11.83□□□□□ -0.51
NEDD4L-203ENST00000357895 GGNBP2Q9H3C7 697 aa11.83□□□□□ -0.51
NEDD4L-203ENST00000357895 STK26Q9P289 416 aa11.83□□□□□ -0.51
NEDD4L-203ENST00000357895 SKOR2Q2VWA4 1001 aaPredicted RBP11.83□□□□□ -0.52
NEDD4L-203ENST00000357895 ERVK-7P63135 1459 aa11.83□□□□□ -0.52
NEDD4L-203ENST00000357895 MSNP26038 577 aaKnown RBP11.83□□□□□ -0.52
NEDD4L-203ENST00000357895 C1orf115Q9H7X2 142 aa11.83□□□□□ -0.52
NEDD4L-203ENST00000357895 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
NEDD4L-203ENST00000357895 ELL2O00472 640 aaPredicted RBP11.82□□□□□ -0.52
NEDD4L-203ENST00000357895 HDAC1Q13547 482 aaPredicted RBP11.82□□□□□ -0.52
NEDD4L-203ENST00000357895 GGT6Q6P531 493 aa11.82□□□□□ -0.52
NEDD4L-203ENST00000357895 KDM5AP29375 1690 aaKnown RBP11.82□□□□□ -0.52
NEDD4L-203ENST00000357895 TTC37Q6PGP7 1564 aa11.82□□□□□ -0.52
NEDD4L-203ENST00000357895 RRP9O43818 475 aaKnown RBP11.82□□□□□ -0.52
NEDD4L-203ENST00000357895 TMPOP42166 694 aaKnown RBP11.82□□□□□ -0.52
NEDD4L-203ENST00000357895 CHD1LQ86WJ1 897 aa11.82□□□□□ -0.52
NEDD4L-203ENST00000357895 MADDQ8WXG6 1647 aa11.81□□□□□ -0.52
NEDD4L-203ENST00000357895 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.81□□□□□ -0.52
NEDD4L-203ENST00000357895 CCDC27Q2M243 656 aa11.81□□□□□ -0.52
NEDD4L-203ENST00000357895 ISY1Q9ULR0 285 aaKnown RBP11.81□□□□□ -0.52
NEDD4L-203ENST00000357895 NASPP49321 788 aaPredicted RBP11.81□□□□□ -0.52
NEDD4L-203ENST00000357895 KIF16BQ96L93 1317 aa11.8□□□□□ -0.52
NEDD4L-203ENST00000357895 PTMSP20962 102 aa11.8□□□□□ -0.52
NEDD4L-203ENST00000357895 EVC2Q86UK5 1308 aa11.8□□□□□ -0.52
NEDD4L-203ENST00000357895 GAS2L3Q86XJ1 694 aa11.8□□□□□ -0.52
NEDD4L-203ENST00000357895 SMC5Q8IY18 1101 aa11.8□□□□□ -0.52
NEDD4L-203ENST00000357895 CT47B1P0C2W7 299 aaPredicted RBP11.8□□□□□ -0.52
NEDD4L-203ENST00000357895 SSFA2P28290 1259 aa11.8□□□□□ -0.52
NEDD4L-203ENST00000357895 RBM42Q9BTD8 480 aaKnown RBP11.8□□□□□ -0.52
NEDD4L-203ENST00000357895 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
NEDD4L-203ENST00000357895 RNF17Q9BXT8 1623 aaKnown RBP11.79□□□□□ -0.52
NEDD4L-203ENST00000357895 ZMYM3Q14202 1370 aa11.79□□□□□ -0.52
NEDD4L-203ENST00000357895 K7ELQ4 463 aaPredicted RBP11.79□□□□□ -0.52
NEDD4L-203ENST00000357895 APBB1O00213 710 aa11.78□□□□□ -0.52
NEDD4L-203ENST00000357895 CALD1Q05682 793 aaKnown RBP11.78□□□□□ -0.52
NEDD4L-203ENST00000357895 PLCH2O75038 1416 aa11.78□□□□□ -0.52
NEDD4L-203ENST00000357895 ERBB4Q15303 1308 aa11.78□□□□□ -0.52
NEDD4L-203ENST00000357895 IQGAP1P46940 1657 aa11.78□□□□□ -0.52
NEDD4L-203ENST00000357895 ZMYND15Q9H091 742 aa11.78□□□□□ -0.52
NEDD4L-203ENST00000357895 NUCB1Q02818 461 aa11.78□□□□□ -0.52
NEDD4L-203ENST00000357895 MCTP1Q6DN14 999 aa11.78□□□□□ -0.52
NEDD4L-203ENST00000357895 PTPRTO14522 1441 aa11.78□□□□□ -0.52
NEDD4L-203ENST00000357895 NOS1P29475 1434 aa11.77□□□□□ -0.52
NEDD4L-203ENST00000357895 KIAA1211Q6ZU35 1233 aa11.77□□□□□ -0.52
NEDD4L-203ENST00000357895 PHF23Q9BUL5 403 aaPredicted RBP11.77□□□□□ -0.52
NEDD4L-203ENST00000357895 ZBTB40Q9NUA8 1239 aa11.77□□□□□ -0.52
NEDD4L-203ENST00000357895 SNX21Q969T3 373 aa11.77□□□□□ -0.53
NEDD4L-203ENST00000357895 ARID3AQ99856 593 aa11.77□□□□□ -0.53
NEDD4L-203ENST00000357895 RBM25P49756 843 aaKnown RBP11.77□□□□□ -0.53
NEDD4L-203ENST00000357895 PLXNC1O60486 1568 aa11.77□□□□□ -0.53
NEDD4L-203ENST00000357895 DIAPH1O60610 1272 aaKnown RBP11.76□□□□□ -0.53
NEDD4L-203ENST00000357895 CCDC173Q0VFZ6 552 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms