RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 GSDMDP57764 484 aa5.58□□□□□ -1.52
SYNE2-203ENST00000357395 NFKBIBQ15653 356 aa5.58□□□□□ -1.52
SYNE2-203ENST00000357395 SPATS2Q86XZ4 545 aaKnown RBP5.58□□□□□ -1.52
SYNE2-203ENST00000357395 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.58□□□□□ -1.52
SYNE2-203ENST00000357395 C10orf67Q8IYJ2 551 aa5.58□□□□□ -1.52
SYNE2-203ENST00000357395 KRT222Q8N1A0 295 aa5.58□□□□□ -1.52
SYNE2-203ENST00000357395 SETD5Q9C0A6 1442 aa5.58□□□□□ -1.52
SYNE2-203ENST00000357395 GBP7Q8N8V2 638 aaPredicted RBP5.58□□□□□ -1.52
SYNE2-203ENST00000357395 BAZ1BQ9UIG0 1483 aaKnown RBP5.58□□□□□ -1.52
SYNE2-203ENST00000357395 RBBP5Q15291 538 aaKnown RBP5.58□□□□□ -1.52
SYNE2-203ENST00000357395 ERCC3P19447 782 aa5.58□□□□□ -1.52
SYNE2-203ENST00000357395 LUC7L3O95232 432 aaKnown RBP5.58□□□□□ -1.52
SYNE2-203ENST00000357395 RNF168Q8IYW5 571 aaPredicted RBP5.58□□□□□ -1.52
SYNE2-203ENST00000357395 PPM1EQ8WY54 764 aa5.58□□□□□ -1.52
SYNE2-203ENST00000357395 CTAGE5O15320 804 aa5.58□□□□□ -1.52
SYNE2-203ENST00000357395 FAM114A2Q9NRY5 505 aa5.58□□□□□ -1.52
SYNE2-203ENST00000357395 POTEDQ86YR6 584 aa5.58□□□□□ -1.52
SYNE2-203ENST00000357395 GIGYF2Q6Y7W6 1299 aaKnown RBP5.58□□□□□ -1.52
SYNE2-203ENST00000357395 CBFA2T2O43439 604 aa5.57□□□□□ -1.52
SYNE2-203ENST00000357395 CCDC192P0DO97 292 aa5.57□□□□□ -1.52
SYNE2-203ENST00000357395 RSPH4AQ5TD94 716 aa5.57□□□□□ -1.52
SYNE2-203ENST00000357395 CPLX2Q6PUV4 134 aaKnown RBP5.57□□□□□ -1.52
SYNE2-203ENST00000357395 RPAINQ86UA6 219 aa5.57□□□□□ -1.52
SYNE2-203ENST00000357395 KLHL10Q6JEL2 608 aa5.57□□□□□ -1.52
SYNE2-203ENST00000357395 BUB1BO60566 1050 aaPredicted RBP5.57□□□□□ -1.52
SYNE2-203ENST00000357395 KCNJ4P48050 445 aa5.57□□□□□ -1.52
SYNE2-203ENST00000357395 RSRC1Q96IZ7 334 aaKnown RBP5.57□□□□□ -1.52
SYNE2-203ENST00000357395 RABEP2Q9H5N1 569 aa5.57□□□□□ -1.52
SYNE2-203ENST00000357395 POLE3Q9NRF9 147 aa5.57□□□□□ -1.52
SYNE2-203ENST00000357395 STMN4Q9H169 189 aaPredicted RBP5.57□□□□□ -1.52
SYNE2-203ENST00000357395 MRVI1Q9Y6F6 885 aa5.57□□□□□ -1.52
SYNE2-203ENST00000357395 IMMTQ16891 758 aaKnown RBP5.57□□□□□ -1.52
SYNE2-203ENST00000357395 ANKS4BQ8N8V4 417 aa5.57□□□□□ -1.52
SYNE2-203ENST00000357395 RASSF4Q9H2L5 321 aa5.57□□□□□ -1.52
SYNE2-203ENST00000357395 KIF1CO43896 1103 aaKnown RBP5.57□□□□□ -1.52
SYNE2-203ENST00000357395 PLEKHD1A6NEE1 506 aa5.57□□□□□ -1.52
SYNE2-203ENST00000357395 ZKSCAN1P17029 563 aaPredicted RBP5.56□□□□□ -1.52
SYNE2-203ENST00000357395 HSP90AB4PQ58FF6 505 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 TCHPQ9BT92 498 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 HIP1O00291 1037 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 JMYQ8N9B5 988 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 FMNL2Q96PY5 1086 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 MYO15BQ96JP2 1530 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 SPECC1LQ69YQ0 1117 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 FRAT1Q92837 279 aaPredicted RBP5.56□□□□□ -1.52
SYNE2-203ENST00000357395 CCDC114Q96M63 670 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 UTP14AQ9BVJ6 771 aaKnown RBP5.56□□□□□ -1.52
SYNE2-203ENST00000357395 HSP90AB3PQ58FF7 597 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 UACAQ9BZF9 1416 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 DDX46Q7L014 1031 aaKnown RBP5.56□□□□□ -1.52
SYNE2-203ENST00000357395 CCDC65Q8IXS2 484 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 NBPF7P0C2Y1 421 aaPredicted RBP5.56□□□□□ -1.52
SYNE2-203ENST00000357395 GNL2Q13823 731 aaKnown RBP5.56□□□□□ -1.52
SYNE2-203ENST00000357395 VPS8Q8N3P4 1428 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 GTF2A1P52655 376 aaPredicted RBP5.56□□□□□ -1.52
SYNE2-203ENST00000357395 HOMER1Q86YM7 354 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 GTF2F1P35269 517 aaKnown RBP eCLIP5.56□□□□□ -1.52
SYNE2-203ENST00000357395 CROCCP2Q86T23 111 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 PLCD3Q8N3E9 789 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 GABPB1Q06547 395 aaPredicted RBP5.56□□□□□ -1.52
SYNE2-203ENST00000357395 MIA2Q96PC5 1412 aa5.56□□□□□ -1.52
SYNE2-203ENST00000357395 BBXQ8WY36 941 aaPredicted RBP5.56□□□□□ -1.52
SYNE2-203ENST00000357395 NLRP5P59047 1200 aa5.55□□□□□ -1.52
SYNE2-203ENST00000357395 BRPF3Q9ULD4 1205 aa5.55□□□□□ -1.52
SYNE2-203ENST00000357395 AIMP1Q12904 312 aaKnown RBP5.55□□□□□ -1.52
SYNE2-203ENST00000357395 PODNQ7Z5L7 613 aa5.55□□□□□ -1.52
SYNE2-203ENST00000357395 EFCC1Q9HA90 598 aa5.55□□□□□ -1.52
SYNE2-203ENST00000357395 FILIP1Q7Z7B0 1213 aa5.55□□□□□ -1.52
SYNE2-203ENST00000357395 RIPPLY1Q0D2K3 151 aa5.55□□□□□ -1.52
SYNE2-203ENST00000357395 CT47A1Q5JQC4 288 aaPredicted RBP5.55□□□□□ -1.52
SYNE2-203ENST00000357395 UTP14CQ5TAP6 766 aaKnown RBP5.55□□□□□ -1.52
SYNE2-203ENST00000357395 CCDC146Q8IYE0 955 aa5.55□□□□□ -1.52
SYNE2-203ENST00000357395 CEP112Q8N8E3 955 aa5.55□□□□□ -1.52
SYNE2-203ENST00000357395 PPP1R12BO60237 982 aaPredicted RBP5.55□□□□□ -1.52
SYNE2-203ENST00000357395 PYM1Q9BRP8 204 aaKnown RBP5.55□□□□□ -1.52
SYNE2-203ENST00000357395 SPAG9O60271 1321 aaKnown RBP5.55□□□□□ -1.52
SYNE2-203ENST00000357395 INTS3Q68E01 1043 aaKnown RBP5.55□□□□□ -1.52
SYNE2-203ENST00000357395 KIF27Q86VH2 1401 aa5.55□□□□□ -1.52
SYNE2-203ENST00000357395 SPRYD3Q8NCJ5 442 aa5.55□□□□□ -1.52
SYNE2-203ENST00000357395 BRMS1Q9HCU9 246 aa5.55□□□□□ -1.52
SYNE2-203ENST00000357395 SMC1AQ14683 1233 aaKnown RBP5.55□□□□□ -1.52
SYNE2-203ENST00000357395 UVSSAQ2YD98 709 aa5.55□□□□□ -1.52
SYNE2-203ENST00000357395 NAP1L3Q99457 506 aaPredicted RBP5.55□□□□□ -1.52
SYNE2-203ENST00000357395 CEP83Q9Y592 693 aa5.54□□□□□ -1.52
SYNE2-203ENST00000357395 CTCFLQ8NI51 663 aaPredicted RBP5.54□□□□□ -1.52
SYNE2-203ENST00000357395 DHX16O60231 1041 aaKnown RBP5.54□□□□□ -1.52
SYNE2-203ENST00000357395 SMARCC1Q92922 1105 aaPredicted RBP5.54□□□□□ -1.52
SYNE2-203ENST00000357395 MKRN1Q9UHC7 482 aaKnown RBP5.54□□□□□ -1.52
SYNE2-203ENST00000357395 UQCRHLA0A096LP55 91 aa5.54□□□□□ -1.52
SYNE2-203ENST00000357395 UQCRHP07919 91 aa5.54□□□□□ -1.52
SYNE2-203ENST00000357395 CCDC18Q5T9S5 1454 aa5.54□□□□□ -1.52
SYNE2-203ENST00000357395 PDE3AQ14432 1141 aa5.54□□□□□ -1.52
SYNE2-203ENST00000357395 ARID4AP29374 1257 aaPredicted RBP5.54□□□□□ -1.52
SYNE2-203ENST00000357395 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.54□□□□□ -1.52
SYNE2-203ENST00000357395 ANKRD1Q15327 319 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 BRD4O60885 1362 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-203ENST00000357395 PSMA5P28066 241 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 IFT57Q9NWB7 429 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 DDX19BQ9UMR2 479 aa5.53□□□□□ -1.52
SYNE2-203ENST00000357395 CEP128Q6ZU80 1094 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms