RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 MCM2P49736 904 aa17.91■□□□□ 0.46
CHD4-201ENST00000357008 RUFY1Q96T51 708 aa17.91■□□□□ 0.46
CHD4-201ENST00000357008 SAFBQ15424 915 aaKnown RBP eCLIP17.91■□□□□ 0.46
CHD4-201ENST00000357008 AMOTL1Q8IY63 956 aa17.91■□□□□ 0.46
CHD4-201ENST00000357008 HMGN5P82970 282 aaKnown RBP17.9■□□□□ 0.46
CHD4-201ENST00000357008 TSPYL4Q9UJ04 414 aa17.9■□□□□ 0.46
CHD4-201ENST00000357008 CDCA7LQ96GN5 454 aa17.9■□□□□ 0.46
CHD4-201ENST00000357008 NFXL1Q6ZNB6 911 aa17.9■□□□□ 0.46
CHD4-201ENST00000357008 PRM3Q9NNZ6 103 aa17.9■□□□□ 0.46
CHD4-201ENST00000357008 FBXW7Q969H0 707 aa17.9■□□□□ 0.46
CHD4-201ENST00000357008 CDR1P51861 262 aa17.9■□□□□ 0.46
CHD4-201ENST00000357008 PDE3AQ14432 1141 aa17.9■□□□□ 0.46
CHD4-201ENST00000357008 RABEP1Q15276 862 aa17.89■□□□□ 0.45
CHD4-201ENST00000357008 PSMA5P28066 241 aa17.89■□□□□ 0.45
CHD4-201ENST00000357008 PDZRN3Q9UPQ7 1066 aa17.89■□□□□ 0.45
CHD4-201ENST00000357008 TSPY26PQ9H489 355 aa17.88■□□□□ 0.45
CHD4-201ENST00000357008 SDF4Q9BRK5 362 aa17.88■□□□□ 0.45
CHD4-201ENST00000357008 BACH2Q9BYV9 841 aa17.88■□□□□ 0.45
CHD4-201ENST00000357008 CUX1P39880 1505 aa17.88■□□□□ 0.45
CHD4-201ENST00000357008 ERICH2A1L162 156 aa17.88■□□□□ 0.45
CHD4-201ENST00000357008 NINLQ9Y2I6 1382 aa17.88■□□□□ 0.45
CHD4-201ENST00000357008 OLFM4Q6UX06 510 aa17.87■□□□□ 0.45
CHD4-201ENST00000357008 NOL10Q9BSC4 688 aaKnown RBP17.87■□□□□ 0.45
CHD4-201ENST00000357008 PATL2C9JE40 543 aaKnown RBP17.87■□□□□ 0.45
CHD4-201ENST00000357008 TRIM5Q9C035 493 aa17.87■□□□□ 0.45
CHD4-201ENST00000357008 PRPF40AO75400 957 aaKnown RBP17.86■□□□□ 0.45
CHD4-201ENST00000357008 RALYLQ86SE5 291 aaKnown RBP17.86■□□□□ 0.45
CHD4-201ENST00000357008 TCP11L2Q8N4U5 519 aa17.86■□□□□ 0.45
CHD4-201ENST00000357008 UBTFL1P0CB47 393 aaPredicted RBP17.86■□□□□ 0.45
CHD4-201ENST00000357008 CNTROBQ8N137 903 aa17.86■□□□□ 0.45
CHD4-201ENST00000357008 HMOX1P09601 288 aa17.85■□□□□ 0.45
CHD4-201ENST00000357008 NEK4P51957 841 aa17.85■□□□□ 0.45
CHD4-201ENST00000357008 PTPRGP23470 1445 aa17.85■□□□□ 0.45
CHD4-201ENST00000357008 PDCP20941 246 aa17.85■□□□□ 0.45
CHD4-201ENST00000357008 FOSBP53539 338 aa17.85■□□□□ 0.45
CHD4-201ENST00000357008 GCC1Q96CN9 775 aa17.85■□□□□ 0.45
CHD4-201ENST00000357008 CCDC66A2RUB6 948 aa17.84■□□□□ 0.45
CHD4-201ENST00000357008 IL27Q8NEV9 243 aa17.84■□□□□ 0.45
CHD4-201ENST00000357008 CWC15Q9P013 229 aaKnown RBP17.84■□□□□ 0.45
CHD4-201ENST00000357008 GNAI3P08754 354 aa17.83■□□□□ 0.45
CHD4-201ENST00000357008 ERCC4Q92889 916 aaPredicted RBP17.83■□□□□ 0.45
CHD4-201ENST00000357008 PPP2R1AP30153 589 aa17.83■□□□□ 0.44
CHD4-201ENST00000357008 GGNBP2Q9H3C7 697 aa17.83■□□□□ 0.44
CHD4-201ENST00000357008 CWC22Q9HCG8 908 aaKnown RBP17.83■□□□□ 0.44
CHD4-201ENST00000357008 MTHFSP49914 203 aa17.82■□□□□ 0.44
CHD4-201ENST00000357008 LRRC9Q6ZRR7 1453 aa17.82■□□□□ 0.44
CHD4-201ENST00000357008 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
CHD4-201ENST00000357008 CCP110O43303 1012 aa17.82■□□□□ 0.44
CHD4-201ENST00000357008 NAP1L1P55209 391 aaKnown RBP17.82■□□□□ 0.44
CHD4-201ENST00000357008 PDILTQ8N807 584 aa17.82■□□□□ 0.44
CHD4-201ENST00000357008 KINO60870 393 aaKnown RBP17.81■□□□□ 0.44
CHD4-201ENST00000357008 CLASRPQ8N2M8 674 aaKnown RBP17.81■□□□□ 0.44
CHD4-201ENST00000357008 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
CHD4-201ENST00000357008 KIF21BO75037 1637 aa17.81■□□□□ 0.44
CHD4-201ENST00000357008 ANKRD50Q9ULJ7 1429 aa17.8■□□□□ 0.44
CHD4-201ENST00000357008 DHX16O60231 1041 aaKnown RBP17.8■□□□□ 0.44
CHD4-201ENST00000357008 AKNAQ7Z591 1439 aa17.79■□□□□ 0.44
CHD4-201ENST00000357008 NEUROD6Q96NK8 337 aa17.79■□□□□ 0.44
CHD4-201ENST00000357008 IGF1RP08069 1367 aa17.79■□□□□ 0.44
CHD4-201ENST00000357008 EXOSC9Q06265 439 aaKnown RBP17.79■□□□□ 0.44
CHD4-201ENST00000357008 VPS37DQ86XT2 251 aa17.79■□□□□ 0.44
CHD4-201ENST00000357008 FSD1Q9BTV5 496 aa17.79■□□□□ 0.44
CHD4-201ENST00000357008 GRPEL1Q9HAV7 217 aa17.79■□□□□ 0.44
CHD4-201ENST00000357008 TCEAL9Q9UHQ7 104 aa17.79■□□□□ 0.44
CHD4-201ENST00000357008 ZNF644Q9H582 1327 aaPredicted RBP17.78■□□□□ 0.44
CHD4-201ENST00000357008 WASHC4Q2M389 1173 aa17.78■□□□□ 0.44
CHD4-201ENST00000357008 RIC3Q7Z5B4 369 aa17.78■□□□□ 0.44
CHD4-201ENST00000357008 BRMS1Q9HCU9 246 aa17.78■□□□□ 0.44
CHD4-201ENST00000357008 SMG6Q86US8 1419 aaKnown RBP17.78■□□□□ 0.44
CHD4-201ENST00000357008 HIP1O00291 1037 aa17.78■□□□□ 0.44
CHD4-201ENST00000357008 SURF6O75683 361 aaKnown RBP17.78■□□□□ 0.44
CHD4-201ENST00000357008 XBP1P17861 261 aa17.78■□□□□ 0.44
CHD4-201ENST00000357008 BCL11BQ9C0K0 894 aaPredicted RBP17.78■□□□□ 0.44
CHD4-201ENST00000357008 ANO8Q9HCE9 1232 aaPredicted RBP17.78■□□□□ 0.44
CHD4-201ENST00000357008 EVA1CP58658 441 aa17.77■□□□□ 0.44
CHD4-201ENST00000357008 RRP12Q5JTH9 1297 aaKnown RBP17.77■□□□□ 0.44
CHD4-201ENST00000357008 FIBPO43427 364 aa17.77■□□□□ 0.43
CHD4-201ENST00000357008 SMC2O95347 1197 aa17.77■□□□□ 0.43
CHD4-201ENST00000357008 DHX8Q14562 1220 aaKnown RBP17.77■□□□□ 0.43
CHD4-201ENST00000357008 K7ELQ4 463 aaPredicted RBP17.76■□□□□ 0.43
CHD4-201ENST00000357008 CAGE1Q8TC20 777 aa17.76■□□□□ 0.43
CHD4-201ENST00000357008 RBM10P98175 930 aaKnown RBP17.76■□□□□ 0.43
CHD4-201ENST00000357008 PNISRQ8TF01 805 aaKnown RBP17.76■□□□□ 0.43
CHD4-201ENST00000357008 TRIM34Q9BYJ4 488 aa17.76■□□□□ 0.43
CHD4-201ENST00000357008 RAD21O60216 631 aa17.76■□□□□ 0.43
CHD4-201ENST00000357008 CCDC30Q5VVM6 783 aa17.76■□□□□ 0.43
CHD4-201ENST00000357008 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
CHD4-201ENST00000357008 WWC1Q8IX03 1113 aa17.75■□□□□ 0.43
CHD4-201ENST00000357008 CCDC192P0DO97 292 aa17.75■□□□□ 0.43
CHD4-201ENST00000357008 ZNF396Q96N95 335 aaPredicted RBP17.75■□□□□ 0.43
CHD4-201ENST00000357008 CIZ1Q9ULV3 898 aaPredicted RBP17.75■□□□□ 0.43
CHD4-201ENST00000357008 FYCO1Q9BQS8 1478 aa17.75■□□□□ 0.43
CHD4-201ENST00000357008 BCAR3O75815 825 aa17.75■□□□□ 0.43
CHD4-201ENST00000357008 CT47B1P0C2W7 299 aaPredicted RBP17.75■□□□□ 0.43
CHD4-201ENST00000357008 CABP2Q9NPB3 220 aa17.75■□□□□ 0.43
CHD4-201ENST00000357008 FANCD2Q9BXW9 1451 aa17.74■□□□□ 0.43
CHD4-201ENST00000357008 H0YHG0 523 aa17.74■□□□□ 0.43
CHD4-201ENST00000357008 OFD1O75665 1012 aa17.74■□□□□ 0.43
CHD4-201ENST00000357008 DCTN1Q14203 1278 aa17.74■□□□□ 0.43
CHD4-201ENST00000357008 WDR33Q9C0J8 1336 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms