RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 C1orf167Q5SNV9 1468 aa29.48■■■□□ 2.31
CHRD-203ENST00000356534 BRINP3Q76B58 766 aa29.47■■■□□ 2.31
CHRD-203ENST00000356534 DISP3Q9P2K9 1392 aa29.47■■■□□ 2.31
CHRD-203ENST00000356534 ILDR2Q71H61 639 aa29.46■■■□□ 2.31
CHRD-203ENST00000356534 SHPRHQ149N8 1683 aa29.46■■■□□ 2.31
CHRD-203ENST00000356534 ADGRB2O60241 1585 aa29.44■■■□□ 2.3
CHRD-203ENST00000356534 WAPLQ7Z5K2 1190 aa29.43■■■□□ 2.3
CHRD-203ENST00000356534 PLEKHH1Q9ULM0 1364 aa29.42■■■□□ 2.3
CHRD-203ENST00000356534 JCADQ9P266 1359 aa29.41■■■□□ 2.3
CHRD-203ENST00000356534 KIF1AQ12756 1690 aa29.4■■■□□ 2.3
CHRD-203ENST00000356534 POGKQ9P215 609 aa29.38■■■□□ 2.29
CHRD-203ENST00000356534 RGPD8O14715 1765 aaPredicted RBP29.38■■■□□ 2.29
CHRD-203ENST00000356534 PRAM1Q96QH2 718 aa29.37■■■□□ 2.29
CHRD-203ENST00000356534 SIN3AQ96ST3 1273 aa29.37■■■□□ 2.29
CHRD-203ENST00000356534 TRPM1Q7Z4N2 1603 aa29.37■■■□□ 2.29
CHRD-203ENST00000356534 NEUROD1Q13562 356 aa29.35■■■□□ 2.29
CHRD-203ENST00000356534 TRAK1Q9UPV9 953 aa29.35■■■□□ 2.29
CHRD-203ENST00000356534 L3MBTL2Q969R5 705 aa29.34■■■□□ 2.29
CHRD-203ENST00000356534 EIF3AQ14152 1382 aaKnown RBP29.32■■■□□ 2.28
CHRD-203ENST00000356534 ITSN1Q15811 1721 aa29.3■■■□□ 2.28
CHRD-203ENST00000356534 SPATA31A6Q5VVP1 1343 aa29.29■■■□□ 2.28
CHRD-203ENST00000356534 PHF23Q9BUL5 403 aaPredicted RBP29.29■■■□□ 2.28
CHRD-203ENST00000356534 SAFB2Q14151 953 aaKnown RBP eCLIP29.28■■■□□ 2.28
CHRD-203ENST00000356534 ANKARQ7Z5J8 1434 aa29.28■■■□□ 2.28
CHRD-203ENST00000356534 TONSLQ96HA7 1378 aa29.27■■■□□ 2.28
CHRD-203ENST00000356534 SOCS7O14512 581 aa29.27■■■□□ 2.28
CHRD-203ENST00000356534 ESCO1Q5FWF5 840 aa29.27■■■□□ 2.28
CHRD-203ENST00000356534 LRRC59Q96AG4 307 aaKnown RBP29.27■■■□□ 2.28
CHRD-203ENST00000356534 ORAI2Q96SN7 254 aa29.27■■■□□ 2.28
CHRD-203ENST00000356534 NPHP3Q7Z494 1330 aa29.26■■■□□ 2.27
CHRD-203ENST00000356534 USP32Q8NFA0 1604 aa29.24■■■□□ 2.27
CHRD-203ENST00000356534 TULP4Q9NRJ4 1543 aa29.24■■■□□ 2.27
CHRD-203ENST00000356534 QRICH2Q9H0J4 1663 aa29.23■■■□□ 2.27
CHRD-203ENST00000356534 SOS2Q07890 1332 aaPredicted RBP29.22■■■□□ 2.27
CHRD-203ENST00000356534 NUTM2FA1L443 756 aa29.21■■■□□ 2.27
CHRD-203ENST00000356534 MINK1Q8N4C8 1332 aaPredicted RBP29.2■■■□□ 2.26
CHRD-203ENST00000356534 NBPF1Q3BBV0 1214 aa29.19■■■□□ 2.26
CHRD-203ENST00000356534 COL22A1Q8NFW1 1626 aaPredicted RBP29.19■■■□□ 2.26
CHRD-203ENST00000356534 PXDNQ92626 1479 aa29.18■■■□□ 2.26
CHRD-203ENST00000356534 ROCK2O75116 1388 aaKnown RBP29.17■■■□□ 2.26
CHRD-203ENST00000356534 DDX17Q92841 729 aaKnown RBP29.17■■■□□ 2.26
CHRD-203ENST00000356534 PCGF6Q9BYE7 350 aa29.17■■■□□ 2.26
CHRD-203ENST00000356534 PNPLA6Q8IY17 1366 aa29.16■■■□□ 2.26
CHRD-203ENST00000356534 CLSPNQ9HAW4 1339 aa29.16■■■□□ 2.26
CHRD-203ENST00000356534 WASLO00401 505 aaPredicted RBP29.15■■■□□ 2.26
CHRD-203ENST00000356534 HIRIP3Q9BW71 556 aaPredicted RBP29.15■■■□□ 2.26
CHRD-203ENST00000356534 LRP6O75581 1613 aa29.14■■■□□ 2.26
CHRD-203ENST00000356534 PHF8Q9UPP1 1060 aa29.13■■■□□ 2.25
CHRD-203ENST00000356534 CENPJQ9HC77 1338 aaPredicted RBP29.13■■■□□ 2.25
CHRD-203ENST00000356534 TOPAZ1Q8N9V7 1692 aa29.12■■■□□ 2.25
CHRD-203ENST00000356534 RALGAPBQ86X10 1494 aa29.12■■■□□ 2.25
CHRD-203ENST00000356534 FOXO3O43524 673 aa29.12■■■□□ 2.25
CHRD-203ENST00000356534 MEX3CQ5U5Q3 659 aaKnown RBP29.11■■■□□ 2.25
CHRD-203ENST00000356534 GPRASP1Q5JY77 1395 aa29.11■■■□□ 2.25
CHRD-203ENST00000356534 MARF1Q9Y4F3 1742 aaKnown RBP29.1■■■□□ 2.25
CHRD-203ENST00000356534 ATP7BP35670 1465 aa29.1■■■□□ 2.25
CHRD-203ENST00000356534 PSME1Q06323 249 aa29.06■■■□□ 2.24
CHRD-203ENST00000356534 TRPM3Q9HCF6 1732 aaPredicted RBP29.05■■■□□ 2.24
CHRD-203ENST00000356534 NBPF8Q3BBV2 869 aa29.04■■■□□ 2.24
CHRD-203ENST00000356534 TNS3Q68CZ2 1445 aa29.03■■■□□ 2.24
CHRD-203ENST00000356534 PRR36Q9H6K5 1346 aa29.03■■■□□ 2.24
CHRD-203ENST00000356534 NUTM2BA6NNL0 878 aaPredicted RBP29.03■■■□□ 2.24
CHRD-203ENST00000356534 NUTM2EB1AL46 878 aaPredicted RBP29.03■■■□□ 2.24
CHRD-203ENST00000356534 KRT28Q7Z3Y7 464 aa29.03■■■□□ 2.24
CHRD-203ENST00000356534 NUTM2AQ8IVF1 878 aaPredicted RBP29.03■■■□□ 2.24
CHRD-203ENST00000356534 SBNO1A3KN83 1393 aa29.02■■■□□ 2.24
CHRD-203ENST00000356534 XPCQ01831 940 aaPredicted RBP29.01■■■□□ 2.23
CHRD-203ENST00000356534 CDK19Q9BWU1 502 aa29.01■■■□□ 2.23
CHRD-203ENST00000356534 SPATA31A3Q5VYP0 1347 aa29■■■□□ 2.23
CHRD-203ENST00000356534 ALS2Q96Q42 1657 aa28.99■■■□□ 2.23
CHRD-203ENST00000356534 PMFBP1Q8TBY8 1022 aa28.99■■■□□ 2.23
CHRD-203ENST00000356534 NUDT16Q96DE0 195 aaKnown RBP28.99■■■□□ 2.23
CHRD-203ENST00000356534 TIMELESSQ9UNS1 1208 aa28.99■■■□□ 2.23
CHRD-203ENST00000356534 ABCA3Q99758 1704 aa28.99■■■□□ 2.23
CHRD-203ENST00000356534 ARHGEF10O15013 1369 aa28.99■■■□□ 2.23
CHRD-203ENST00000356534 CARD11Q9BXL7 1154 aa28.98■■■□□ 2.23
CHRD-203ENST00000356534 ZNF772Q68DY9 489 aaPredicted RBP28.97■■■□□ 2.23
CHRD-203ENST00000356534 RGS17Q9UGC6 210 aaPredicted RBP28.97■■■□□ 2.23
CHRD-203ENST00000356534 SBNO2Q9Y2G9 1366 aa28.96■■■□□ 2.23
CHRD-203ENST00000356534 SRPK2P78362 688 aaKnown RBP28.95■■■□□ 2.22
CHRD-203ENST00000356534 NGDNQ8NEJ9 315 aaKnown RBP28.95■■■□□ 2.22
CHRD-203ENST00000356534 CCDC61Q9Y6R9 512 aa28.95■■■□□ 2.22
CHRD-203ENST00000356534 EVC2Q86UK5 1308 aa28.94■■■□□ 2.22
CHRD-203ENST00000356534 POLR3AO14802 1390 aaPredicted RBP28.9■■■□□ 2.22
CHRD-203ENST00000356534 PPIP5K1Q6PFW1 1433 aa28.89■■■□□ 2.22
CHRD-203ENST00000356534 C8orf37Q96NL8 207 aa28.89■■■□□ 2.22
CHRD-203ENST00000356534 CCER1Q8TC90 406 aaPredicted RBP28.88■■■□□ 2.21
CHRD-203ENST00000356534 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.88■■■□□ 2.21
CHRD-203ENST00000356534 AFF2P51816 1311 aa28.88■■■□□ 2.21
CHRD-203ENST00000356534 CRYBG1Q9Y4K1 1723 aa28.87■■■□□ 2.21
CHRD-203ENST00000356534 PLEKHG3A1L390 1219 aa28.87■■■□□ 2.21
CHRD-203ENST00000356534 ADAMTS2O95450 1211 aa28.87■■■□□ 2.21
CHRD-203ENST00000356534 POTEAQ6S8J7 498 aa28.86■■■□□ 2.21
CHRD-203ENST00000356534 AKAP12Q02952 1782 aa28.85■■■□□ 2.21
CHRD-203ENST00000356534 LMOD2Q6P5Q4 547 aa28.85■■■□□ 2.21
CHRD-203ENST00000356534 BRD4O60885 1362 aaPredicted RBP28.85■■■□□ 2.21
CHRD-203ENST00000356534 HAP1P54257 671 aaPredicted RBP28.84■■■□□ 2.21
CHRD-203ENST00000356534 NGLY1Q96IV0 654 aa28.84■■■□□ 2.21
CHRD-203ENST00000356534 CABP2Q9NPB3 220 aa28.84■■■□□ 2.21
CHRD-203ENST00000356534 ATAD2Q6PL18 1390 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms