RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 ZBED9Q6R2W3 1325 aa19.42■□□□□ 0.7
RXRA-201ENST00000356384 ZFYVE27Q5T4F4 411 aa19.42■□□□□ 0.7
RXRA-201ENST00000356384 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
RXRA-201ENST00000356384 NESP48681 1621 aa19.41■□□□□ 0.7
RXRA-201ENST00000356384 FYB1O15117 783 aa19.4■□□□□ 0.7
RXRA-201ENST00000356384 OFD1O75665 1012 aa19.4■□□□□ 0.7
RXRA-201ENST00000356384 NOM1Q5C9Z4 860 aaKnown RBP19.4■□□□□ 0.7
RXRA-201ENST00000356384 LNPKQ9C0E8 428 aa19.4■□□□□ 0.7
RXRA-201ENST00000356384 RALYLQ86SE5 291 aaKnown RBP19.4■□□□□ 0.7
RXRA-201ENST00000356384 RSPH4AQ5TD94 716 aa19.4■□□□□ 0.7
RXRA-201ENST00000356384 ROCK1Q13464 1354 aa19.39■□□□□ 0.7
RXRA-201ENST00000356384 EPS15P42566 896 aa19.39■□□□□ 0.69
RXRA-201ENST00000356384 HSP90AB2PQ58FF8 381 aa19.39■□□□□ 0.69
RXRA-201ENST00000356384 NEUROD6Q96NK8 337 aa19.39■□□□□ 0.69
RXRA-201ENST00000356384 OLFM4Q6UX06 510 aa19.39■□□□□ 0.69
RXRA-201ENST00000356384 WASHC4Q2M389 1173 aa19.39■□□□□ 0.69
RXRA-201ENST00000356384 CAGE1Q8TC20 777 aa19.39■□□□□ 0.69
RXRA-201ENST00000356384 TTLL5Q6EMB2 1281 aa19.38■□□□□ 0.69
RXRA-201ENST00000356384 ERC2O15083 957 aa19.38■□□□□ 0.69
RXRA-201ENST00000356384 KDM4AO75164 1064 aa19.38■□□□□ 0.69
RXRA-201ENST00000356384 IGF1RP08069 1367 aa19.38■□□□□ 0.69
RXRA-201ENST00000356384 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.38■□□□□ 0.69
RXRA-201ENST00000356384 VGFO15240 615 aaPredicted RBP19.37■□□□□ 0.69
RXRA-201ENST00000356384 R3HCC1Q9Y3T6 440 aaKnown RBP19.37■□□□□ 0.69
RXRA-201ENST00000356384 GAPVD1Q14C86 1478 aa19.37■□□□□ 0.69
RXRA-201ENST00000356384 C22orf23Q9BZE7 217 aa19.37■□□□□ 0.69
RXRA-201ENST00000356384 MTMR7Q9Y216 660 aa19.37■□□□□ 0.69
RXRA-201ENST00000356384 JPH4Q96JJ6 628 aa19.37■□□□□ 0.69
RXRA-201ENST00000356384 CCDC173Q0VFZ6 552 aa19.36■□□□□ 0.69
RXRA-201ENST00000356384 MAP7D2Q96T17 732 aa19.36■□□□□ 0.69
RXRA-201ENST00000356384 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
RXRA-201ENST00000356384 CFTRP13569 1480 aa19.36■□□□□ 0.69
RXRA-201ENST00000356384 HSP90AB4PQ58FF6 505 aa19.36■□□□□ 0.69
RXRA-201ENST00000356384 CCDC27Q2M243 656 aa19.36■□□□□ 0.69
RXRA-201ENST00000356384 SDF4Q9BRK5 362 aa19.36■□□□□ 0.69
RXRA-201ENST00000356384 NAT10Q9H0A0 1025 aaKnown RBP19.36■□□□□ 0.69
RXRA-201ENST00000356384 RNF214Q8ND24 703 aa19.35■□□□□ 0.69
RXRA-201ENST00000356384 RBM33Q96EV2 1170 aaKnown RBP19.35■□□□□ 0.69
RXRA-201ENST00000356384 TSPYL4Q9UJ04 414 aa19.35■□□□□ 0.69
RXRA-201ENST00000356384 SKIDA1Q1XH10 827 aa19.34■□□□□ 0.69
RXRA-201ENST00000356384 BRMS1Q9HCU9 246 aa19.34■□□□□ 0.69
RXRA-201ENST00000356384 UACAQ9BZF9 1416 aa19.34■□□□□ 0.69
RXRA-201ENST00000356384 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
RXRA-201ENST00000356384 FANCIQ9NVI1 1328 aa19.34■□□□□ 0.69
RXRA-201ENST00000356384 H0YHG0 523 aa19.34■□□□□ 0.69
RXRA-201ENST00000356384 AIMP1Q12904 312 aaKnown RBP19.34■□□□□ 0.69
RXRA-201ENST00000356384 PHF23Q9BUL5 403 aaPredicted RBP19.33■□□□□ 0.69
RXRA-201ENST00000356384 CCDC39Q9UFE4 941 aa19.33■□□□□ 0.69
RXRA-201ENST00000356384 USP47Q96K76 1375 aa19.33■□□□□ 0.68
RXRA-201ENST00000356384 RIC3Q7Z5B4 369 aa19.32■□□□□ 0.68
RXRA-201ENST00000356384 NASPP49321 788 aaPredicted RBP19.32■□□□□ 0.68
RXRA-201ENST00000356384 PSME1Q06323 249 aa19.32■□□□□ 0.68
RXRA-201ENST00000356384 DCTN1Q14203 1278 aa19.32■□□□□ 0.68
RXRA-201ENST00000356384 CCDC191Q8NCU4 936 aa19.32■□□□□ 0.68
RXRA-201ENST00000356384 CCDC18Q5T9S5 1454 aa19.31■□□□□ 0.68
RXRA-201ENST00000356384 AQRO60306 1485 aaKnown RBP eCLIP19.31■□□□□ 0.685e-7■■■■□ 25.1
RXRA-201ENST00000356384 UNC13AQ9UPW8 1703 aa19.31■□□□□ 0.68
RXRA-201ENST00000356384 RUNDC1Q96C34 613 aa19.3■□□□□ 0.68
RXRA-201ENST00000356384 HMOX1P09601 288 aa19.3■□□□□ 0.68
RXRA-201ENST00000356384 XBP1P17861 261 aa19.3■□□□□ 0.68
RXRA-201ENST00000356384 CDC45O75419 566 aa19.29■□□□□ 0.68
RXRA-201ENST00000356384 GNAI1P63096 354 aa19.29■□□□□ 0.68
RXRA-201ENST00000356384 TRIM5Q9C035 493 aa19.29■□□□□ 0.68
RXRA-201ENST00000356384 ERCC4Q92889 916 aaPredicted RBP19.29■□□□□ 0.68
RXRA-201ENST00000356384 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.29■□□□□ 0.68
RXRA-201ENST00000356384 SMC2O95347 1197 aa19.29■□□□□ 0.68
RXRA-201ENST00000356384 ATP2B1P20020 1258 aa19.29■□□□□ 0.68
RXRA-201ENST00000356384 IKQ13123 557 aaPredicted RBP19.29■□□□□ 0.68
RXRA-201ENST00000356384 NFKBIBQ15653 356 aa19.29■□□□□ 0.68
RXRA-201ENST00000356384 PANK1Q8TE04 598 aa19.28■□□□□ 0.68
RXRA-201ENST00000356384 MRE11P49959 708 aa19.27■□□□□ 0.68
RXRA-201ENST00000356384 UBTFL1P0CB47 393 aaPredicted RBP19.27■□□□□ 0.68
RXRA-201ENST00000356384 PSMA5P28066 241 aa19.27■□□□□ 0.68
RXRA-201ENST00000356384 FSD1Q9BTV5 496 aa19.27■□□□□ 0.68
RXRA-201ENST00000356384 NUTM2GQ5VZR2 741 aa19.27■□□□□ 0.67
RXRA-201ENST00000356384 FMNL2Q96PY5 1086 aa19.27■□□□□ 0.67
RXRA-201ENST00000356384 RDXP35241 583 aaKnown RBP19.26■□□□□ 0.67
RXRA-201ENST00000356384 CWC15Q9P013 229 aaKnown RBP19.26■□□□□ 0.67
RXRA-201ENST00000356384 MYO6Q9UM54 1294 aa19.26■□□□□ 0.67
RXRA-201ENST00000356384 RAPGEF4Q8WZA2 1011 aa19.25■□□□□ 0.67
RXRA-201ENST00000356384 NINLQ9Y2I6 1382 aa19.25■□□□□ 0.67
RXRA-201ENST00000356384 CAVIN1Q6NZI2 390 aaKnown RBP19.25■□□□□ 0.67
RXRA-201ENST00000356384 BRPF1P55201 1214 aaPredicted RBP19.25■□□□□ 0.67
RXRA-201ENST00000356384 CNTROBQ8N137 903 aa19.25■□□□□ 0.67
RXRA-201ENST00000356384 TMEM132AQ24JP5 1023 aa19.24■□□□□ 0.67
RXRA-201ENST00000356384 KINO60870 393 aaKnown RBP19.23■□□□□ 0.67
RXRA-201ENST00000356384 PAF1Q8N7H5 531 aa19.23■□□□□ 0.67
RXRA-201ENST00000356384 TSPYL1Q9H0U9 437 aa19.23■□□□□ 0.67
RXRA-201ENST00000356384 SART3Q15020 963 aaKnown RBP19.22■□□□□ 0.67
RXRA-201ENST00000356384 SMARCE1Q969G3 411 aa19.22■□□□□ 0.67
RXRA-201ENST00000356384 DNAJC2Q99543 621 aaKnown RBP19.22■□□□□ 0.67
RXRA-201ENST00000356384 FILIP1LQ4L180 1135 aa19.22■□□□□ 0.67
RXRA-201ENST00000356384 AXDND1Q5T1B0 1012 aaPredicted RBP19.22■□□□□ 0.67
RXRA-201ENST00000356384 CDK5RAP3Q96JB5 506 aa19.22■□□□□ 0.67
RXRA-201ENST00000356384 PLCD4Q9BRC7 762 aa19.22■□□□□ 0.67
RXRA-201ENST00000356384 MAGEC2Q9UBF1 373 aaPredicted RBP19.22■□□□□ 0.67
RXRA-201ENST00000356384 CUX1P39880 1505 aa19.22■□□□□ 0.67
RXRA-201ENST00000356384 TRAK2O60296 914 aa19.21■□□□□ 0.67
RXRA-201ENST00000356384 LETM1O95202 739 aaPredicted RBP19.21■□□□□ 0.67
RXRA-201ENST00000356384 TSPY26PQ9H489 355 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms