RNA–Protein interactions for RNA: ENST00000355260.7

NUP98-202, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 5,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-202ENST00000355260 ABCC2Q92887 1545 aa9.98□□□□□ -0.81
NUP98-202ENST00000355260 DHX8Q14562 1220 aaKnown RBP9.97□□□□□ -0.81
NUP98-202ENST00000355260 LRRFIP1Q32MZ4 808 aaKnown RBP9.97□□□□□ -0.81
NUP98-202ENST00000355260 ALDH1L2Q3SY69 923 aa9.97□□□□□ -0.81
NUP98-202ENST00000355260 CWC22Q9HCG8 908 aaKnown RBP9.97□□□□□ -0.81
NUP98-202ENST00000355260 ADGRL1O94910 1474 aa9.97□□□□□ -0.81
NUP98-202ENST00000355260 FAM43AQ8N2R8 423 aa9.97□□□□□ -0.81
NUP98-202ENST00000355260 ANKRD36BQ8N2N9 1353 aa9.97□□□□□ -0.81
NUP98-202ENST00000355260 MAP7D2Q96T17 732 aa9.96□□□□□ -0.81
NUP98-202ENST00000355260 C22orf23Q9BZE7 217 aa9.96□□□□□ -0.81
NUP98-202ENST00000355260 WDR7Q9Y4E6 1490 aa9.96□□□□□ -0.81
NUP98-202ENST00000355260 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.96□□□□□ -0.82
NUP98-202ENST00000355260 OSCARQ8IYS5 282 aa9.96□□□□□ -0.82
NUP98-202ENST00000355260 ZNF692Q9BU19 519 aaPredicted RBP9.96□□□□□ -0.82
NUP98-202ENST00000355260 RABEP1Q15276 862 aa9.96□□□□□ -0.82
NUP98-202ENST00000355260 COG6Q9Y2V7 657 aa9.96□□□□□ -0.82
NUP98-202ENST00000355260 NFKBIBQ15653 356 aa9.95□□□□□ -0.82
NUP98-202ENST00000355260 PLXNC1O60486 1568 aa9.95□□□□□ -0.82
NUP98-202ENST00000355260 SYCP2Q9BX26 1530 aa9.95□□□□□ -0.82
NUP98-202ENST00000355260 CCDC27Q2M243 656 aa9.95□□□□□ -0.82
NUP98-202ENST00000355260 SLKQ9H2G2 1235 aaPredicted RBP9.95□□□□□ -0.82
NUP98-202ENST00000355260 STK26Q9P289 416 aa9.95□□□□□ -0.82
NUP98-202ENST00000355260 BLMP54132 1417 aaPredicted RBP9.95□□□□□ -0.82
NUP98-202ENST00000355260 RIPK4P57078 832 aa9.94□□□□□ -0.82
NUP98-202ENST00000355260 POLR3AO14802 1390 aaPredicted RBP9.94□□□□□ -0.82
NUP98-202ENST00000355260 KDM5BQ9UGL1 1544 aa9.94□□□□□ -0.82
NUP98-202ENST00000355260 PLEKHH1Q9ULM0 1364 aa9.94□□□□□ -0.82
NUP98-202ENST00000355260 RNF123Q5XPI4 1314 aa9.94□□□□□ -0.82
NUP98-202ENST00000355260 MBD3O95983 291 aa9.94□□□□□ -0.82
NUP98-202ENST00000355260 MVPQ14764 893 aaKnown RBP9.94□□□□□ -0.82
NUP98-202ENST00000355260 C14orf37Q86TY3 774 aa9.93□□□□□ -0.82
NUP98-202ENST00000355260 KDM5CP41229 1560 aa9.93□□□□□ -0.82
NUP98-202ENST00000355260 ABCA8O94911 1581 aa9.93□□□□□ -0.82
NUP98-202ENST00000355260 SHROOM2Q13796 1616 aa9.93□□□□□ -0.82
NUP98-202ENST00000355260 ZNF608Q9ULD9 1512 aaPredicted RBP9.93□□□□□ -0.82
NUP98-202ENST00000355260 CROCC2H7BZ55 1655 aa9.93□□□□□ -0.82
NUP98-202ENST00000355260 ARXQ96QS3 562 aa9.93□□□□□ -0.82
NUP98-202ENST00000355260 ZNF518AQ6AHZ1 1483 aa9.93□□□□□ -0.82
NUP98-202ENST00000355260 NSD3Q9BZ95 1437 aa9.93□□□□□ -0.82
NUP98-202ENST00000355260 PLIN1O60240 522 aa9.93□□□□□ -0.82
NUP98-202ENST00000355260 FCHSD2O94868 740 aa9.93□□□□□ -0.82
NUP98-202ENST00000355260 TPM2P07951 284 aa9.93□□□□□ -0.82
NUP98-202ENST00000355260 FGD1P98174 961 aa9.93□□□□□ -0.82
NUP98-202ENST00000355260 LAMC1P11047 1609 aa9.93□□□□□ -0.82
NUP98-202ENST00000355260 MYO5CQ9NQX4 1742 aa9.92□□□□□ -0.82
NUP98-202ENST00000355260 TCP11L2Q8N4U5 519 aa9.92□□□□□ -0.82
NUP98-202ENST00000355260 SYNMO15061 1565 aa9.92□□□□□ -0.82
NUP98-202ENST00000355260 ZFYVE9O95405 1425 aa9.92□□□□□ -0.82
NUP98-202ENST00000355260 FANCAO15360 1455 aa9.92□□□□□ -0.82
NUP98-202ENST00000355260 ABCC10Q5T3U5 1492 aa9.92□□□□□ -0.82
NUP98-202ENST00000355260 HIP1O00291 1037 aa9.92□□□□□ -0.82
NUP98-202ENST00000355260 ANKRD45Q5TZF3 282 aa9.92□□□□□ -0.82
NUP98-202ENST00000355260 GAS2L2Q8NHY3 880 aa9.92□□□□□ -0.82
NUP98-202ENST00000355260 POLR1AO95602 1720 aaPredicted RBP9.92□□□□□ -0.82
NUP98-202ENST00000355260 CEP170Q5SW79 1584 aa9.92□□□□□ -0.82
NUP98-202ENST00000355260 SRCIN1Q9C0H9 1055 aa9.91□□□□□ -0.82
NUP98-202ENST00000355260 UHRF1BP1LA0JNW5 1464 aa9.91□□□□□ -0.82
NUP98-202ENST00000355260 PREX2Q70Z35 1606 aa9.91□□□□□ -0.82
NUP98-202ENST00000355260 SPATA31E1Q6ZUB1 1445 aa9.91□□□□□ -0.82
NUP98-202ENST00000355260 KDM5AP29375 1690 aaKnown RBP9.91□□□□□ -0.82
NUP98-202ENST00000355260 GNAI3P08754 354 aa9.91□□□□□ -0.82
NUP98-202ENST00000355260 CCDC173Q0VFZ6 552 aa9.91□□□□□ -0.82
NUP98-202ENST00000355260 ARAP3Q8WWN8 1544 aa9.91□□□□□ -0.82
NUP98-202ENST00000355260 ERC2O15083 957 aa9.9□□□□□ -0.82
NUP98-202ENST00000355260 NBPF1Q3BBV0 1214 aa9.9□□□□□ -0.82
NUP98-202ENST00000355260 MBD5Q9P267 1494 aa9.9□□□□□ -0.82
NUP98-202ENST00000355260 CCT4P50991 539 aaKnown RBP9.89□□□□□ -0.83
NUP98-202ENST00000355260 RNF20Q5VTR2 975 aa9.89□□□□□ -0.83
NUP98-202ENST00000355260 CCDC39Q9UFE4 941 aa9.89□□□□□ -0.83
NUP98-202ENST00000355260 DDX49Q9Y6V7 483 aaKnown RBP9.89□□□□□ -0.83
NUP98-202ENST00000355260 AMPHP49418 695 aa9.89□□□□□ -0.83
NUP98-202ENST00000355260 ATF7IPQ6VMQ6 1270 aa9.89□□□□□ -0.83
NUP98-202ENST00000355260 MTHFSP49914 203 aa9.88□□□□□ -0.83
NUP98-202ENST00000355260 PDZRN3Q9UPQ7 1066 aa9.88□□□□□ -0.83
NUP98-202ENST00000355260 DDX58O95786 925 aaKnown RBP9.88□□□□□ -0.83
NUP98-202ENST00000355260 ERC1Q8IUD2 1116 aa9.88□□□□□ -0.83
NUP98-202ENST00000355260 MAGI3Q5TCQ9 1506 aa9.88□□□□□ -0.83
NUP98-202ENST00000355260 CDK11BP21127 795 aaKnown RBP9.88□□□□□ -0.83
NUP98-202ENST00000355260 CFAP70Q5T0N1 1121 aa9.88□□□□□ -0.83
NUP98-202ENST00000355260 IFT57Q9NWB7 429 aa9.88□□□□□ -0.83
NUP98-202ENST00000355260 DENND4BO75064 1496 aaPredicted RBP9.87□□□□□ -0.83
NUP98-202ENST00000355260 POGZQ7Z3K3 1410 aa9.87□□□□□ -0.83
NUP98-202ENST00000355260 RPAP2Q8IXW5 612 aaPredicted RBP9.87□□□□□ -0.83
NUP98-202ENST00000355260 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.87□□□□□ -0.83
NUP98-202ENST00000355260 MYOM2P54296 1465 aa9.87□□□□□ -0.83
NUP98-202ENST00000355260 ZKSCAN1P17029 563 aaPredicted RBP9.87□□□□□ -0.83
NUP98-202ENST00000355260 SAFB2Q14151 953 aaKnown RBP eCLIP9.87□□□□□ -0.83
NUP98-202ENST00000355260 SBNO2Q9Y2G9 1366 aa9.87□□□□□ -0.83
NUP98-202ENST00000355260 ATP10AO60312 1499 aa9.87□□□□□ -0.83
NUP98-202ENST00000355260 TRIM6-TRIM34B2RNG4 842 aa9.87□□□□□ -0.83
NUP98-202ENST00000355260 C11orf95C9JLR9 678 aaPredicted RBP9.87□□□□□ -0.83
NUP98-202ENST00000355260 DISP3Q9P2K9 1392 aa9.87□□□□□ -0.83
NUP98-202ENST00000355260 TTC37Q6PGP7 1564 aa9.86□□□□□ -0.83
NUP98-202ENST00000355260 NGDNQ8NEJ9 315 aaKnown RBP9.86□□□□□ -0.83
NUP98-202ENST00000355260 ARHGAP45Q92619 1136 aa9.86□□□□□ -0.83
NUP98-202ENST00000355260 C14orf93Q9H972 538 aaKnown RBP9.86□□□□□ -0.83
NUP98-202ENST00000355260 UNC13BO14795 1591 aa9.86□□□□□ -0.83
NUP98-202ENST00000355260 DRC7Q8IY82 874 aa9.86□□□□□ -0.83
NUP98-202ENST00000355260 SOS1Q07889 1333 aaPredicted RBP9.86□□□□□ -0.83
NUP98-202ENST00000355260 CCDC30Q5VVM6 783 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms