RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 RBM33Q96EV2 1170 aaKnown RBP34.05■■■■□ 3.04
HMGA2-201ENST00000354636 LRRC7Q96NW7 1537 aa34.05■■■■□ 3.04
HMGA2-201ENST00000354636 TMEM94Q12767 1356 aa34.03■■■■□ 3.04
HMGA2-201ENST00000354636 NCOA3Q9Y6Q9 1424 aa34.02■■■■□ 3.04
HMGA2-201ENST00000354636 MINK1Q8N4C8 1332 aaPredicted RBP34.01■■■■□ 3.03
HMGA2-201ENST00000354636 C14orf37Q86TY3 774 aa33.99■■■■□ 3.03
HMGA2-201ENST00000354636 SLC24A1O60721 1099 aa33.99■■■■□ 3.03
HMGA2-201ENST00000354636 XIRP1Q702N8 1843 aaKnown RBP33.98■■■■□ 3.03
HMGA2-201ENST00000354636 NALCNQ8IZF0 1738 aa33.98■■■■□ 3.03
HMGA2-201ENST00000354636 ADGRB2O60241 1585 aa33.97■■■■□ 3.03
HMGA2-201ENST00000354636 ADGRL3Q9HAR2 1447 aa33.97■■■■□ 3.03
HMGA2-201ENST00000354636 TULP4Q9NRJ4 1543 aa33.92■■■■□ 3.02
HMGA2-201ENST00000354636 TMF1P82094 1093 aa33.92■■■■□ 3.02
HMGA2-201ENST00000354636 C19orf44Q9H6X5 657 aa33.91■■■■□ 3.02
HMGA2-201ENST00000354636 EVC2Q86UK5 1308 aa33.91■■■■□ 3.02
HMGA2-201ENST00000354636 DISP3Q9P2K9 1392 aa33.89■■■■□ 3.02
HMGA2-201ENST00000354636 WASLO00401 505 aaPredicted RBP33.89■■■■□ 3.02
HMGA2-201ENST00000354636 CDC42BPGQ6DT37 1551 aa33.88■■■■□ 3.01
HMGA2-201ENST00000354636 C11orf95C9JLR9 678 aaPredicted RBP33.88■■■■□ 3.01
HMGA2-201ENST00000354636 CDK19Q9BWU1 502 aa33.87■■■■□ 3.01
HMGA2-201ENST00000354636 MSH6P52701 1360 aa33.85■■■■□ 3.01
HMGA2-201ENST00000354636 DCCP43146 1447 aa33.84■■■■□ 3.01
HMGA2-201ENST00000354636 CDCA8Q53HL2 280 aa33.81■■■■□ 3
HMGA2-201ENST00000354636 PUS7Q96PZ0 661 aaKnown RBP33.81■■■■□ 3
HMGA2-201ENST00000354636 FMN2Q9NZ56 1722 aa33.8■■■■□ 3
HMGA2-201ENST00000354636 ZNF316A6NFI3 1004 aaPredicted RBP33.8■■■■□ 3
HMGA2-201ENST00000354636 SRPK2P78362 688 aaKnown RBP33.8■■■■□ 3
HMGA2-201ENST00000354636 CABP2Q9NPB3 220 aa33.8■■■■□ 3
HMGA2-201ENST00000354636 ATF3P18847 181 aa33.78■■■■□ 3
HMGA2-201ENST00000354636 KIF7Q2M1P5 1343 aa33.77■■■■□ 3
HMGA2-201ENST00000354636 CADPS2Q86UW7 1296 aa33.77■■■■□ 3
HMGA2-201ENST00000354636 WASHC2AQ641Q2 1341 aa33.77■■■■□ 3
HMGA2-201ENST00000354636 CCDC7Q96M83 1385 aa33.75■■■□□ 2.99
HMGA2-201ENST00000354636 PRR36Q9H6K5 1346 aa33.74■■■□□ 2.99
HMGA2-201ENST00000354636 ATP7BP35670 1465 aa33.74■■■□□ 2.99
HMGA2-201ENST00000354636 NUTM2FA1L443 756 aa33.74■■■□□ 2.99
HMGA2-201ENST00000354636 CERKQ8TCT0 537 aa33.74■■■□□ 2.99
HMGA2-201ENST00000354636 USP32Q8NFA0 1604 aa33.73■■■□□ 2.99
HMGA2-201ENST00000354636 ANKARQ7Z5J8 1434 aa33.73■■■□□ 2.99
HMGA2-201ENST00000354636 NUDT16Q96DE0 195 aaKnown RBP33.73■■■□□ 2.99
HMGA2-201ENST00000354636 ATAD2Q6PL18 1390 aa33.72■■■□□ 2.99
HMGA2-201ENST00000354636 IQSEC2Q5JU85 1478 aa33.72■■■□□ 2.99
HMGA2-201ENST00000354636 MST1RQ04912 1400 aa33.7■■■□□ 2.99
HMGA2-201ENST00000354636 POLR3GLQ9BT43 218 aa33.69■■■□□ 2.98
HMGA2-201ENST00000354636 CCDC61Q9Y6R9 512 aa33.69■■■□□ 2.98
HMGA2-201ENST00000354636 RGPD8O14715 1765 aaPredicted RBP33.68■■■□□ 2.98
HMGA2-201ENST00000354636 C1orf167Q5SNV9 1468 aa33.66■■■□□ 2.98
HMGA2-201ENST00000354636 TOPAZ1Q8N9V7 1692 aa33.65■■■□□ 2.98
HMGA2-201ENST00000354636 ITSN1Q15811 1721 aa33.63■■■□□ 2.97
HMGA2-201ENST00000354636 SLAIN2Q9P270 581 aa33.63■■■□□ 2.97
HMGA2-201ENST00000354636 MYOM1P52179 1685 aa33.62■■■□□ 2.97
HMGA2-201ENST00000354636 PPIP5K1Q6PFW1 1433 aa33.62■■■□□ 2.97
HMGA2-201ENST00000354636 CABP1Q9NZU7 370 aa33.61■■■□□ 2.97
HMGA2-201ENST00000354636 NINLQ9Y2I6 1382 aa33.61■■■□□ 2.97
HMGA2-201ENST00000354636 SLC12A5Q9H2X9 1139 aa33.6■■■□□ 2.97
HMGA2-201ENST00000354636 TMC1Q8TDI8 760 aa33.59■■■□□ 2.97
HMGA2-201ENST00000354636 ESCO1Q5FWF5 840 aa33.58■■■□□ 2.97
HMGA2-201ENST00000354636 ORAI2Q96SN7 254 aa33.58■■■□□ 2.97
HMGA2-201ENST00000354636 PLEKHG3A1L390 1219 aa33.58■■■□□ 2.97
HMGA2-201ENST00000354636 TOM1O60784 492 aa33.58■■■□□ 2.97
HMGA2-201ENST00000354636 UBAP1LF5GYI3 381 aa33.57■■■□□ 2.96
HMGA2-201ENST00000354636 PHF8Q9UPP1 1060 aa33.54■■■□□ 2.96
HMGA2-201ENST00000354636 PMFBP1Q8TBY8 1022 aa33.53■■■□□ 2.96
HMGA2-201ENST00000354636 CD163L1Q9NR16 1453 aa33.52■■■□□ 2.96
HMGA2-201ENST00000354636 BRINP3Q76B58 766 aa33.5■■■□□ 2.95
HMGA2-201ENST00000354636 KIF1AQ12756 1690 aa33.5■■■□□ 2.95
HMGA2-201ENST00000354636 ACEP12821 1306 aa33.5■■■□□ 2.95
HMGA2-201ENST00000354636 POLR3AO14802 1390 aaPredicted RBP33.5■■■□□ 2.95
HMGA2-201ENST00000354636 CPSF1Q10570 1443 aaKnown RBP33.49■■■□□ 2.95
HMGA2-201ENST00000354636 SCAF1Q9H7N4 1312 aaKnown RBP33.48■■■□□ 2.95
HMGA2-201ENST00000354636 ANKRD36BQ8N2N9 1353 aa33.48■■■□□ 2.95
HMGA2-201ENST00000354636 PIP4K2BP78356 416 aa33.48■■■□□ 2.95
HMGA2-201ENST00000354636 TERF2IPQ9NYB0 399 aa33.48■■■□□ 2.95
HMGA2-201ENST00000354636 DDX10Q13206 875 aaKnown RBP33.47■■■□□ 2.95
HMGA2-201ENST00000354636 PANK3Q9H999 370 aa33.47■■■□□ 2.95
HMGA2-201ENST00000354636 A0A1W2PP64 1363 aa33.46■■■□□ 2.95
HMGA2-201ENST00000354636 NGDNQ8NEJ9 315 aaKnown RBP33.46■■■□□ 2.95
HMGA2-201ENST00000354636 AKAP12Q02952 1782 aa33.44■■■□□ 2.94
HMGA2-201ENST00000354636 HDGFL2Q7Z4V5 671 aaPredicted RBP33.44■■■□□ 2.94
HMGA2-201ENST00000354636 ZNF692Q9BU19 519 aaPredicted RBP33.44■■■□□ 2.94
HMGA2-201ENST00000354636 FOXO3O43524 673 aa33.43■■■□□ 2.94
HMGA2-201ENST00000354636 ROBO1Q9Y6N7 1651 aa33.42■■■□□ 2.94
HMGA2-201ENST00000354636 CARD14Q9BXL6 1004 aa33.4■■■□□ 2.94
HMGA2-201ENST00000354636 MON2Q7Z3U7 1717 aa33.39■■■□□ 2.94
HMGA2-201ENST00000354636 KTN1Q86UP2 1357 aaKnown RBP33.39■■■□□ 2.94
HMGA2-201ENST00000354636 USP6P35125 1406 aa33.39■■■□□ 2.94
HMGA2-201ENST00000354636 NPHP3Q7Z494 1330 aa33.37■■■□□ 2.93
HMGA2-201ENST00000354636 PSME1Q06323 249 aa33.37■■■□□ 2.93
HMGA2-201ENST00000354636 DDX17Q92841 729 aaKnown RBP33.36■■■□□ 2.93
HMGA2-201ENST00000354636 PER1O15534 1290 aaPredicted RBP33.35■■■□□ 2.93
HMGA2-201ENST00000354636 NHSL1Q5SYE7 1610 aa33.35■■■□□ 2.93
HMGA2-201ENST00000354636 SSH2Q76I76 1423 aa33.34■■■□□ 2.93
HMGA2-201ENST00000354636 EDC4Q6P2E9 1401 aaKnown RBP33.33■■■□□ 2.93
HMGA2-201ENST00000354636 NRKQ7Z2Y5 1582 aa33.33■■■□□ 2.93
HMGA2-201ENST00000354636 NSD3Q9BZ95 1437 aa33.33■■■□□ 2.93
HMGA2-201ENST00000354636 KRT28Q7Z3Y7 464 aa33.33■■■□□ 2.93
HMGA2-201ENST00000354636 BRD4O60885 1362 aaPredicted RBP33.31■■■□□ 2.92
HMGA2-201ENST00000354636 PXDNQ92626 1479 aa33.3■■■□□ 2.92
HMGA2-201ENST00000354636 XPCQ01831 940 aaPredicted RBP33.3■■■□□ 2.92
HMGA2-201ENST00000354636 AHDC1Q5TGY3 1603 aaPredicted RBP33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms