RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 HSPA2P54652 639 aa14.53□□□□□ -0.08
SVIP-201ENST00000354193 GOLGA2Q08379 1002 aa14.53□□□□□ -0.08
SVIP-201ENST00000354193 PLEKHH1Q9ULM0 1364 aa14.53□□□□□ -0.08
SVIP-201ENST00000354193 RNF17Q9BXT8 1623 aaKnown RBP14.52□□□□□ -0.08
SVIP-201ENST00000354193 CCDC61Q9Y6R9 512 aa14.52□□□□□ -0.09
SVIP-201ENST00000354193 WASLO00401 505 aaPredicted RBP14.52□□□□□ -0.09
SVIP-201ENST00000354193 FRMPD1Q5SYB0 1578 aa14.52□□□□□ -0.09
SVIP-201ENST00000354193 SPHKAPQ2M3C7 1700 aa14.51□□□□□ -0.09
SVIP-201ENST00000354193 ELL2O00472 640 aaPredicted RBP14.51□□□□□ -0.09
SVIP-201ENST00000354193 YTHDC2Q9H6S0 1430 aaKnown RBP14.5□□□□□ -0.09
SVIP-201ENST00000354193 EIF2AK4Q9P2K8 1649 aaKnown RBP14.5□□□□□ -0.09
SVIP-201ENST00000354193 TCP11L2Q8N4U5 519 aa14.49□□□□□ -0.09
SVIP-201ENST00000354193 ESCO1Q5FWF5 840 aa14.49□□□□□ -0.09
SVIP-201ENST00000354193 CLUAP1Q96AJ1 413 aa14.49□□□□□ -0.09
SVIP-201ENST00000354193 AMPHP49418 695 aa14.49□□□□□ -0.09
SVIP-201ENST00000354193 NLRP6P59044 892 aa14.49□□□□□ -0.09
SVIP-201ENST00000354193 METP08581 1390 aa14.49□□□□□ -0.09
SVIP-201ENST00000354193 DIAPH1O60610 1272 aaKnown RBP14.48□□□□□ -0.09
SVIP-201ENST00000354193 KCNA6P17658 529 aa14.48□□□□□ -0.09
SVIP-201ENST00000354193 EMILIN1Q9Y6C2 1016 aa14.48□□□□□ -0.09
SVIP-201ENST00000354193 ERVK-7P63135 1459 aa14.48□□□□□ -0.09
SVIP-201ENST00000354193 TCERG1O14776 1098 aaKnown RBP14.48□□□□□ -0.09
SVIP-201ENST00000354193 PROSER2Q86WR7 435 aaPredicted RBP14.48□□□□□ -0.09
SVIP-201ENST00000354193 KIF1BO60333 1816 aa14.48□□□□□ -0.09
SVIP-201ENST00000354193 FYB1O15117 783 aa14.47□□□□□ -0.09
SVIP-201ENST00000354193 PPP4R2Q9NY27 417 aa14.47□□□□□ -0.09
SVIP-201ENST00000354193 PARD3Q8TEW0 1356 aa14.47□□□□□ -0.09
SVIP-201ENST00000354193 HAP1P54257 671 aaPredicted RBP14.47□□□□□ -0.09
SVIP-201ENST00000354193 PSME1Q06323 249 aa14.46□□□□□ -0.09
SVIP-201ENST00000354193 ATAD2Q6PL18 1390 aa14.46□□□□□ -0.09
SVIP-201ENST00000354193 PIK3C2GO75747 1445 aa14.46□□□□□ -0.09
SVIP-201ENST00000354193 TRPM1Q7Z4N2 1603 aa14.46□□□□□ -0.1
SVIP-201ENST00000354193 EXOC6Q8TAG9 804 aa14.45□□□□□ -0.1
SVIP-201ENST00000354193 NPM2Q86SE8 214 aaKnown RBP14.45□□□□□ -0.1
SVIP-201ENST00000354193 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.45□□□□□ -0.1
SVIP-201ENST00000354193 ABTB2Q8N961 1025 aa14.44□□□□□ -0.1
SVIP-201ENST00000354193 MROH1Q8NDA8 1641 aa14.44□□□□□ -0.1
SVIP-201ENST00000354193 A0A1W2PP64 1363 aa14.44□□□□□ -0.1
SVIP-201ENST00000354193 TMEM2Q9UHN6 1383 aa14.44□□□□□ -0.1
SVIP-201ENST00000354193 FOXO3O43524 673 aa14.43□□□□□ -0.1
SVIP-201ENST00000354193 RIPK4P57078 832 aa14.43□□□□□ -0.1
SVIP-201ENST00000354193 PRKAR2BP31323 418 aa14.42□□□□□ -0.1
SVIP-201ENST00000354193 MAP3K4Q9Y6R4 1608 aa14.42□□□□□ -0.1
SVIP-201ENST00000354193 ACEP12821 1306 aa14.42□□□□□ -0.1
SVIP-201ENST00000354193 A0A0G2JS52 829 aa14.42□□□□□ -0.1
SVIP-201ENST00000354193 RUNDC1Q96C34 613 aa14.42□□□□□ -0.1
SVIP-201ENST00000354193 ERICH6Q7L0X2 663 aa14.42□□□□□ -0.1
SVIP-201ENST00000354193 THUMPD2Q9BTF0 503 aaKnown RBP14.42□□□□□ -0.1
SVIP-201ENST00000354193 ARHGAP31Q2M1Z3 1444 aa14.41□□□□□ -0.1
SVIP-201ENST00000354193 TSR2Q969E8 191 aaKnown RBP14.41□□□□□ -0.1
SVIP-201ENST00000354193 GLI2P10070 1586 aa14.4□□□□□ -0.1
SVIP-201ENST00000354193 PDE3BQ13370 1112 aa14.4□□□□□ -0.1
SVIP-201ENST00000354193 MADDQ8WXG6 1647 aa14.4□□□□□ -0.1
SVIP-201ENST00000354193 RRP1P56182 461 aaKnown RBP14.4□□□□□ -0.1
SVIP-201ENST00000354193 MYOM2P54296 1465 aa14.4□□□□□ -0.1
SVIP-201ENST00000354193 CAMSAP1Q5T5Y3 1602 aa14.39□□□□□ -0.11
SVIP-201ENST00000354193 ASXL1Q8IXJ9 1541 aa14.39□□□□□ -0.11
SVIP-201ENST00000354193 A2ML1A8K2U0 1454 aa14.39□□□□□ -0.11
SVIP-201ENST00000354193 CLTCQ00610 1675 aaKnown RBP14.39□□□□□ -0.11
SVIP-201ENST00000354193 RICTORQ6R327 1708 aa14.38□□□□□ -0.11
SVIP-201ENST00000354193 ANKRD36BQ8N2N9 1353 aa14.38□□□□□ -0.11
SVIP-201ENST00000354193 BCAR3O75815 825 aa14.38□□□□□ -0.11
SVIP-201ENST00000354193 FTSJ3Q8IY81 847 aaKnown RBP14.38□□□□□ -0.11
SVIP-201ENST00000354193 RGS3P49796 1198 aa14.38□□□□□ -0.11
SVIP-201ENST00000354193 CRBNQ96SW2 442 aa14.38□□□□□ -0.11
SVIP-201ENST00000354193 LMTK2Q8IWU2 1503 aa14.38□□□□□ -0.11
SVIP-201ENST00000354193 VWDEQ8N2E2 1590 aa14.37□□□□□ -0.11
SVIP-201ENST00000354193 SULT6B1Q6IMI4 303 aa14.37□□□□□ -0.11
SVIP-201ENST00000354193 LRPPRCP42704 1394 aaKnown RBP14.37□□□□□ -0.11
SVIP-201ENST00000354193 ADGRB3O60242 1522 aa14.37□□□□□ -0.11
SVIP-201ENST00000354193 PPIP5K1Q6PFW1 1433 aa14.37□□□□□ -0.11
SVIP-201ENST00000354193 DEPDC5O75140 1603 aa14.36□□□□□ -0.11
SVIP-201ENST00000354193 ATF3P18847 181 aa14.36□□□□□ -0.11
SVIP-201ENST00000354193 SYNMO15061 1565 aa14.36□□□□□ -0.11
SVIP-201ENST00000354193 DCTN1Q14203 1278 aa14.36□□□□□ -0.11
SVIP-201ENST00000354193 ZNF692Q9BU19 519 aaPredicted RBP14.36□□□□□ -0.11
SVIP-201ENST00000354193 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
SVIP-201ENST00000354193 DMRT2Q9Y5R5 561 aa14.35□□□□□ -0.11
SVIP-201ENST00000354193 ROBO2Q9HCK4 1378 aa14.35□□□□□ -0.11
SVIP-201ENST00000354193 SMC4Q9NTJ3 1288 aa14.35□□□□□ -0.11
SVIP-201ENST00000354193 E9PSI1 815 aa14.35□□□□□ -0.11
SVIP-201ENST00000354193 WWC1Q8IX03 1113 aa14.35□□□□□ -0.11
SVIP-201ENST00000354193 CSB-PGBD3P0DP91 1061 aa14.34□□□□□ -0.11
SVIP-201ENST00000354193 COG6Q9Y2V7 657 aa14.34□□□□□ -0.11
SVIP-201ENST00000354193 C20orf194Q5TEA3 1177 aa14.34□□□□□ -0.11
SVIP-201ENST00000354193 TBX22Q9Y458 520 aa14.34□□□□□ -0.11
SVIP-201ENST00000354193 MROH2AA6NES4 1674 aa14.34□□□□□ -0.11
SVIP-201ENST00000354193 HSP90AB2PQ58FF8 381 aa14.34□□□□□ -0.11
SVIP-201ENST00000354193 PNNQ9H307 717 aaKnown RBP14.34□□□□□ -0.11
SVIP-201ENST00000354193 POLKQ9UBT6 870 aa14.33□□□□□ -0.11
SVIP-201ENST00000354193 RTF1Q92541 710 aaKnown RBP14.33□□□□□ -0.12
SVIP-201ENST00000354193 MYH16Q9H6N6 1097 aa14.33□□□□□ -0.12
SVIP-201ENST00000354193 ZC3H6P61129 1189 aaKnown RBP14.33□□□□□ -0.12
SVIP-201ENST00000354193 USHBP1Q8N6Y0 703 aa14.33□□□□□ -0.12
SVIP-201ENST00000354193 NECTIN2Q92692 538 aa14.33□□□□□ -0.12
SVIP-201ENST00000354193 SKAP1Q86WV1 359 aa14.32□□□□□ -0.12
SVIP-201ENST00000354193 PANK1Q8TE04 598 aa14.32□□□□□ -0.12
SVIP-201ENST00000354193 PHF8Q9UPP1 1060 aa14.32□□□□□ -0.12
SVIP-201ENST00000354193 PRR36Q9H6K5 1346 aa14.32□□□□□ -0.12
SVIP-201ENST00000354193 ABCC11Q96J66 1382 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms