RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 VPS37CA5D8V6 355 aaPredicted RBP19.51■□□□□ 0.71
PTPN11-201ENST00000351677 APPP05067 770 aa19.51■□□□□ 0.71
PTPN11-201ENST00000351677 C1orf115Q9H7X2 142 aa19.51■□□□□ 0.71
PTPN11-201ENST00000351677 CDC45O75419 566 aa19.51■□□□□ 0.71
PTPN11-201ENST00000351677 SYTL4Q96C24 671 aaPredicted RBP19.51■□□□□ 0.71
PTPN11-201ENST00000351677 AKAP17AQ02040 695 aaKnown RBP19.51■□□□□ 0.71
PTPN11-201ENST00000351677 TROQ12816 1431 aaPredicted RBP19.5■□□□□ 0.71
PTPN11-201ENST00000351677 MARCH6O60337 910 aa19.5■□□□□ 0.71
PTPN11-201ENST00000351677 LRRFIP1Q32MZ4 808 aaKnown RBP19.5■□□□□ 0.71
PTPN11-201ENST00000351677 SYNE3Q6ZMZ3 975 aa19.5■□□□□ 0.71
PTPN11-201ENST00000351677 HECW1Q76N89 1606 aa19.49■□□□□ 0.71
PTPN11-201ENST00000351677 UBTFL1P0CB47 393 aaPredicted RBP19.49■□□□□ 0.71
PTPN11-201ENST00000351677 RNF20Q5VTR2 975 aa19.49■□□□□ 0.71
PTPN11-201ENST00000351677 SMC3Q9UQE7 1217 aa19.49■□□□□ 0.71
PTPN11-201ENST00000351677 TPD52L1Q16890 204 aaPredicted RBP19.49■□□□□ 0.71
PTPN11-201ENST00000351677 CHMP4CQ96CF2 233 aa19.49■□□□□ 0.71
PTPN11-201ENST00000351677 NUCB2P80303 420 aa19.49■□□□□ 0.71
PTPN11-201ENST00000351677 RIC3Q7Z5B4 369 aa19.48■□□□□ 0.71
PTPN11-201ENST00000351677 NOB1Q9ULX3 412 aaKnown RBP19.48■□□□□ 0.71
PTPN11-201ENST00000351677 FOSBP53539 338 aa19.48■□□□□ 0.71
PTPN11-201ENST00000351677 VPS53Q5VIR6 699 aa19.48■□□□□ 0.71
PTPN11-201ENST00000351677 RAPGEF4Q8WZA2 1011 aa19.48■□□□□ 0.71
PTPN11-201ENST00000351677 BICD2Q8TD16 824 aa19.48■□□□□ 0.71
PTPN11-201ENST00000351677 RSPH6AQ9H0K4 717 aa19.48■□□□□ 0.71
PTPN11-201ENST00000351677 SUPT6HQ7KZ85 1726 aaKnown RBP19.47■□□□□ 0.71
PTPN11-201ENST00000351677 HSP90AB4PQ58FF6 505 aa19.47■□□□□ 0.71
PTPN11-201ENST00000351677 ERBINQ96RT1 1412 aa19.47■□□□□ 0.71
PTPN11-201ENST00000351677 CPLX1O14810 134 aa19.47■□□□□ 0.71
PTPN11-201ENST00000351677 MRC2Q9UBG0 1479 aa19.47■□□□□ 0.71
PTPN11-201ENST00000351677 ERC2O15083 957 aa19.47■□□□□ 0.71
PTPN11-201ENST00000351677 HSP90AA2PQ14568 343 aaPredicted RBP19.47■□□□□ 0.71
PTPN11-201ENST00000351677 CPLX2Q6PUV4 134 aaKnown RBP19.47■□□□□ 0.71
PTPN11-201ENST00000351677 SCAPERQ9BY12 1400 aa19.46■□□□□ 0.71
PTPN11-201ENST00000351677 TPM3P06753 285 aa19.46■□□□□ 0.71
PTPN11-201ENST00000351677 CDK13Q14004 1512 aaKnown RBP19.46■□□□□ 0.71
PTPN11-201ENST00000351677 TWISTNBQ3B726 338 aaPredicted RBP19.46■□□□□ 0.71
PTPN11-201ENST00000351677 NLRP2Q9NX02 1062 aa19.46■□□□□ 0.71
PTPN11-201ENST00000351677 TXNDC2Q86VQ3 553 aa19.45■□□□□ 0.7
PTPN11-201ENST00000351677 PDE3AQ14432 1141 aa19.45■□□□□ 0.7
PTPN11-201ENST00000351677 PDE4CQ08493 712 aa19.45■□□□□ 0.7
PTPN11-201ENST00000351677 SNAPC4Q5SXM2 1469 aa19.45■□□□□ 0.7
PTPN11-201ENST00000351677 TRIM29Q14134 588 aa19.45■□□□□ 0.7
PTPN11-201ENST00000351677 NEUROD6Q96NK8 337 aa19.44■□□□□ 0.7
PTPN11-201ENST00000351677 CABP1Q9NZU7 370 aa19.44■□□□□ 0.7
PTPN11-201ENST00000351677 NAIPQ13075 1403 aa19.44■□□□□ 0.7
PTPN11-201ENST00000351677 CDK19Q9BWU1 502 aa19.44■□□□□ 0.7
PTPN11-201ENST00000351677 ZNF592Q92610 1267 aa19.43■□□□□ 0.7
PTPN11-201ENST00000351677 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
PTPN11-201ENST00000351677 ABTB2Q8N961 1025 aa19.43■□□□□ 0.7
PTPN11-201ENST00000351677 SMG6Q86US8 1419 aaKnown RBP19.43■□□□□ 0.7
PTPN11-201ENST00000351677 FBXW7Q969H0 707 aa19.43■□□□□ 0.7
PTPN11-201ENST00000351677 TRDNQ13061 729 aa19.42■□□□□ 0.7
PTPN11-201ENST00000351677 CC2D2AQ9P2K1 1620 aa19.42■□□□□ 0.7
PTPN11-201ENST00000351677 SURF6O75683 361 aaKnown RBP19.42■□□□□ 0.7
PTPN11-201ENST00000351677 CCDC30Q5VVM6 783 aa19.42■□□□□ 0.7
PTPN11-201ENST00000351677 CCAR2Q8N163 923 aaKnown RBP19.41■□□□□ 0.7
PTPN11-201ENST00000351677 NFXL1Q6ZNB6 911 aa19.4■□□□□ 0.7
PTPN11-201ENST00000351677 GOLGA6L1Q8N7Z2 621 aa19.4■□□□□ 0.7
PTPN11-201ENST00000351677 HMGXB3Q12766 1538 aa19.4■□□□□ 0.7
PTPN11-201ENST00000351677 GAS2L2Q8NHY3 880 aa19.4■□□□□ 0.7
PTPN11-201ENST00000351677 ATF3P18847 181 aa19.39■□□□□ 0.7
PTPN11-201ENST00000351677 VPS37DQ86XT2 251 aa19.39■□□□□ 0.7
PTPN11-201ENST00000351677 GNAI3P08754 354 aa19.39■□□□□ 0.69
PTPN11-201ENST00000351677 SULT6B1Q6IMI4 303 aa19.39■□□□□ 0.69
PTPN11-201ENST00000351677 PLEKHH2Q8IVE3 1493 aa19.39■□□□□ 0.69
PTPN11-201ENST00000351677 PCF11O94913 1555 aaKnown RBP19.39■□□□□ 0.69
PTPN11-201ENST00000351677 BACH2Q9BYV9 841 aa19.39■□□□□ 0.69
PTPN11-201ENST00000351677 EPRSP07814 1512 aaKnown RBP19.39■□□□□ 0.69
PTPN11-201ENST00000351677 CNTROBQ8N137 903 aa19.38■□□□□ 0.69
PTPN11-201ENST00000351677 RAD21O60216 631 aa19.38■□□□□ 0.69
PTPN11-201ENST00000351677 TSR1Q2NL82 804 aaKnown RBP19.38■□□□□ 0.69
PTPN11-201ENST00000351677 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
PTPN11-201ENST00000351677 WASHC4Q2M389 1173 aa19.37■□□□□ 0.69
PTPN11-201ENST00000351677 C11orf95C9JLR9 678 aaPredicted RBP19.37■□□□□ 0.69
PTPN11-201ENST00000351677 TRAK2O60296 914 aa19.37■□□□□ 0.69
PTPN11-201ENST00000351677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.37■□□□□ 0.69
PTPN11-201ENST00000351677 DNMBPQ6XZF7 1577 aa19.37■□□□□ 0.69
PTPN11-201ENST00000351677 NINLQ9Y2I6 1382 aa19.36■□□□□ 0.69
PTPN11-201ENST00000351677 MSH5O43196 834 aa19.36■□□□□ 0.69
PTPN11-201ENST00000351677 NEK4P51957 841 aa19.36■□□□□ 0.69
PTPN11-201ENST00000351677 ESCO1Q5FWF5 840 aa19.36■□□□□ 0.69
PTPN11-201ENST00000351677 CLASRPQ8N2M8 674 aaKnown RBP19.36■□□□□ 0.69
PTPN11-201ENST00000351677 FSD1Q9BTV5 496 aa19.36■□□□□ 0.69
PTPN11-201ENST00000351677 WDR63Q8IWG1 891 aa19.36■□□□□ 0.69
PTPN11-201ENST00000351677 GCC1Q96CN9 775 aa19.36■□□□□ 0.69
PTPN11-201ENST00000351677 SASS6Q6UVJ0 657 aa19.36■□□□□ 0.69
PTPN11-201ENST00000351677 NOL10Q9BSC4 688 aaKnown RBP19.36■□□□□ 0.69
PTPN11-201ENST00000351677 CCDC27Q2M243 656 aa19.35■□□□□ 0.69
PTPN11-201ENST00000351677 RNF214Q8ND24 703 aa19.35■□□□□ 0.69
PTPN11-201ENST00000351677 TPM1P09493 284 aa19.34■□□□□ 0.69
PTPN11-201ENST00000351677 AMOTL1Q8IY63 956 aa19.34■□□□□ 0.69
PTPN11-201ENST00000351677 A0A0U1RQG5 324 aaPredicted RBP19.34■□□□□ 0.69
PTPN11-201ENST00000351677 RAPGEF3O95398 923 aa19.34■□□□□ 0.69
PTPN11-201ENST00000351677 ATF7IPQ6VMQ6 1270 aa19.34■□□□□ 0.69
PTPN11-201ENST00000351677 ZNF428Q96B54 188 aa19.34■□□□□ 0.69
PTPN11-201ENST00000351677 GNAI2P04899 355 aa19.34■□□□□ 0.69
PTPN11-201ENST00000351677 MVPQ14764 893 aaKnown RBP19.34■□□□□ 0.69
PTPN11-201ENST00000351677 CAVIN1Q6NZI2 390 aaKnown RBP19.33■□□□□ 0.68
PTPN11-201ENST00000351677 RALYLQ86SE5 291 aaKnown RBP19.33■□□□□ 0.68
PTPN11-201ENST00000351677 NASPP49321 788 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms