RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 SLIT1O75093 1534 aa18.18■□□□□ 0.5
UBA3-201ENST00000349511 SRPK2P78362 688 aaKnown RBP18.17■□□□□ 0.5
UBA3-201ENST00000349511 ARHGAP23Q9P227 1491 aa18.17■□□□□ 0.5
UBA3-201ENST00000349511 TULP4Q9NRJ4 1543 aa18.17■□□□□ 0.5
UBA3-201ENST00000349511 HNRNPUQ00839 825 aaKnown RBP eCLIP18.17■□□□□ 0.5
UBA3-201ENST00000349511 KNSTRNQ9Y448 316 aa18.17■□□□□ 0.5
UBA3-201ENST00000349511 SETD1BQ9UPS6 1966 aaKnown RBP18.16■□□□□ 0.5
UBA3-201ENST00000349511 ABCC11Q96J66 1382 aa18.15■□□□□ 0.5
UBA3-201ENST00000349511 FAM9BQ8IZU0 186 aa18.14■□□□□ 0.5
UBA3-201ENST00000349511 KTN1Q86UP2 1357 aaKnown RBP18.14■□□□□ 0.49
UBA3-201ENST00000349511 CARD14Q9BXL6 1004 aa18.13■□□□□ 0.49
UBA3-201ENST00000349511 CDK19Q9BWU1 502 aa18.13■□□□□ 0.49
UBA3-201ENST00000349511 ANKLE2Q86XL3 938 aa18.11■□□□□ 0.49
UBA3-201ENST00000349511 RALBP1Q15311 655 aa18.11■□□□□ 0.49
UBA3-201ENST00000349511 ROBO2Q9HCK4 1378 aa18.1■□□□□ 0.49
UBA3-201ENST00000349511 PTPRUQ92729 1446 aa18.1■□□□□ 0.49
UBA3-201ENST00000349511 AMER1Q5JTC6 1135 aaPredicted RBP18.1■□□□□ 0.49
UBA3-201ENST00000349511 AMOTL2Q9Y2J4 779 aa18.1■□□□□ 0.49
UBA3-201ENST00000349511 DLC1Q96QB1 1528 aa18.09■□□□□ 0.49
UBA3-201ENST00000349511 MED14O60244 1454 aa18.09■□□□□ 0.49
UBA3-201ENST00000349511 TBX22Q9Y458 520 aa18.09■□□□□ 0.49
UBA3-201ENST00000349511 MYBBP1AQ9BQG0 1328 aaKnown RBP18.09■□□□□ 0.49
UBA3-201ENST00000349511 PARD3Q8TEW0 1356 aa18.09■□□□□ 0.49
UBA3-201ENST00000349511 ZNF142P52746 1687 aaPredicted RBP18.08■□□□□ 0.49
UBA3-201ENST00000349511 NUTM2FA1L443 756 aa18.06■□□□□ 0.48
UBA3-201ENST00000349511 KDM4FA0A1W2PPD8 638 aa18.05■□□□□ 0.48
UBA3-201ENST00000349511 NSD3Q9BZ95 1437 aa18.05■□□□□ 0.48
UBA3-201ENST00000349511 NCKAP5LQ9HCH0 1330 aa18.05■□□□□ 0.48
UBA3-201ENST00000349511 CABP1Q9NZU7 370 aa18.05■□□□□ 0.48
UBA3-201ENST00000349511 TECPR2O15040 1411 aa18.05■□□□□ 0.48
UBA3-201ENST00000349511 SENP3-EIF4A1A0A087X0R7 540 aa18.05■□□□□ 0.48
UBA3-201ENST00000349511 ANP32EQ9BTT0 268 aa18.05■□□□□ 0.48
UBA3-201ENST00000349511 RBM19Q9Y4C8 960 aaKnown RBP18.05■□□□□ 0.48
UBA3-201ENST00000349511 KNDC1Q76NI1 1749 aa18.05■□□□□ 0.48
UBA3-201ENST00000349511 WASLO00401 505 aaPredicted RBP18.04■□□□□ 0.48
UBA3-201ENST00000349511 PUS7Q96PZ0 661 aaKnown RBP18.04■□□□□ 0.48
UBA3-201ENST00000349511 CPS1P31327 1500 aa18.04■□□□□ 0.48
UBA3-201ENST00000349511 FAM135BQ49AJ0 1406 aa18.03■□□□□ 0.48
UBA3-201ENST00000349511 KCNA6P17658 529 aa18.02■□□□□ 0.48
UBA3-201ENST00000349511 RBM33Q96EV2 1170 aaKnown RBP18.02■□□□□ 0.48
UBA3-201ENST00000349511 ATAD2Q6PL18 1390 aa18.02■□□□□ 0.48
UBA3-201ENST00000349511 NLRP13Q86W25 1043 aa18.02■□□□□ 0.47
UBA3-201ENST00000349511 SIRT1Q96EB6 747 aa18.02■□□□□ 0.47
UBA3-201ENST00000349511 TNNT2P45379 298 aaPredicted RBP18.01■□□□□ 0.47
UBA3-201ENST00000349511 A0A1W2PP64 1363 aa18.01■□□□□ 0.47
UBA3-201ENST00000349511 HSPA2P54652 639 aa18.01■□□□□ 0.47
UBA3-201ENST00000349511 IRX6P78412 446 aaPredicted RBP18.01■□□□□ 0.47
UBA3-201ENST00000349511 ANKRD36BQ8N2N9 1353 aa18■□□□□ 0.47
UBA3-201ENST00000349511 SIPA1L2Q9P2F8 1722 aaPredicted RBP18■□□□□ 0.47
UBA3-201ENST00000349511 PNISRQ8TF01 805 aaKnown RBP17.99■□□□□ 0.47
UBA3-201ENST00000349511 PPP2R1AP30153 589 aa17.99■□□□□ 0.47
UBA3-201ENST00000349511 BRD4O60885 1362 aaPredicted RBP17.99■□□□□ 0.47
UBA3-201ENST00000349511 NUDT16Q96DE0 195 aaKnown RBP17.98■□□□□ 0.47
UBA3-201ENST00000349511 DIP2AQ14689 1571 aa17.98■□□□□ 0.47
UBA3-201ENST00000349511 TERF2IPQ9NYB0 399 aa17.97■□□□□ 0.47
UBA3-201ENST00000349511 NPHP4O75161 1426 aaPredicted RBP17.96■□□□□ 0.47
UBA3-201ENST00000349511 CD163L1Q9NR16 1453 aa17.96■□□□□ 0.47
UBA3-201ENST00000349511 MORC1Q86VD1 984 aa17.96■□□□□ 0.47
UBA3-201ENST00000349511 CGNL1Q0VF96 1302 aa17.96■□□□□ 0.46
UBA3-201ENST00000349511 PRR36Q9H6K5 1346 aa17.96■□□□□ 0.46
UBA3-201ENST00000349511 HDGFL2Q7Z4V5 671 aaPredicted RBP17.95■□□□□ 0.46
UBA3-201ENST00000349511 NPC1L1Q9UHC9 1359 aa17.95■□□□□ 0.46
UBA3-201ENST00000349511 PPIP5K1Q6PFW1 1433 aa17.95■□□□□ 0.46
UBA3-201ENST00000349511 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.95■□□□□ 0.462e-7■■■□□ 16
UBA3-201ENST00000349511 GGNBP2Q9H3C7 697 aa17.95■□□□□ 0.46
UBA3-201ENST00000349511 NINLQ9Y2I6 1382 aa17.94■□□□□ 0.46
UBA3-201ENST00000349511 CCDC61Q9Y6R9 512 aa17.93■□□□□ 0.46
UBA3-201ENST00000349511 PTCH1Q13635 1447 aa17.93■□□□□ 0.46
UBA3-201ENST00000349511 XRN1Q8IZH2 1706 aaKnown RBP17.93■□□□□ 0.46
UBA3-201ENST00000349511 ERICH6BQ5W0A0 696 aa17.93■□□□□ 0.46
UBA3-201ENST00000349511 ZBED9Q6R2W3 1325 aa17.93■□□□□ 0.46
UBA3-201ENST00000349511 CHD2O14647 1828 aaKnown RBP17.92■□□□□ 0.46
UBA3-201ENST00000349511 PIK3R4Q99570 1358 aa17.91■□□□□ 0.46
UBA3-201ENST00000349511 ATP7BP35670 1465 aa17.9■□□□□ 0.46
UBA3-201ENST00000349511 FYB1O15117 783 aa17.9■□□□□ 0.46
UBA3-201ENST00000349511 PMFBP1Q8TBY8 1022 aa17.89■□□□□ 0.45
UBA3-201ENST00000349511 PPP4R2Q9NY27 417 aa17.88■□□□□ 0.45
UBA3-201ENST00000349511 ADGRB2O60241 1585 aa17.87■□□□□ 0.45
UBA3-201ENST00000349511 SALL2Q9Y467 1007 aaPredicted RBP17.87■□□□□ 0.45
UBA3-201ENST00000349511 FBLN1P23142 703 aa17.86■□□□□ 0.45
UBA3-201ENST00000349511 C14orf37Q86TY3 774 aa17.86■□□□□ 0.45
UBA3-201ENST00000349511 USP32Q8NFA0 1604 aa17.86■□□□□ 0.45
UBA3-201ENST00000349511 ZRANB1Q9UGI0 708 aa17.86■□□□□ 0.45
UBA3-201ENST00000349511 RGPD8O14715 1765 aaPredicted RBP17.86■□□□□ 0.45
UBA3-201ENST00000349511 ACEP12821 1306 aa17.85■□□□□ 0.45
UBA3-201ENST00000349511 CPSF1Q10570 1443 aaKnown RBP17.85■□□□□ 0.45
UBA3-201ENST00000349511 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
UBA3-201ENST00000349511 MTHFSP49914 203 aa17.84■□□□□ 0.45
UBA3-201ENST00000349511 NME9Q86XW9 330 aa17.84■□□□□ 0.45
UBA3-201ENST00000349511 WDR43Q15061 677 aaKnown RBP eCLIP17.83■□□□□ 0.44
UBA3-201ENST00000349511 NKTRP30414 1462 aaKnown RBP17.83■□□□□ 0.44
UBA3-201ENST00000349511 LMTK3Q96Q04 1460 aa17.83■□□□□ 0.44
UBA3-201ENST00000349511 CDC42BPGQ6DT37 1551 aa17.83■□□□□ 0.44
UBA3-201ENST00000349511 NSD2O96028 1365 aa17.82■□□□□ 0.44
UBA3-201ENST00000349511 PROSER2Q86WR7 435 aaPredicted RBP17.82■□□□□ 0.44
UBA3-201ENST00000349511 NALCNQ8IZF0 1738 aa17.81■□□□□ 0.44
UBA3-201ENST00000349511 NGDNQ8NEJ9 315 aaKnown RBP17.8■□□□□ 0.44
UBA3-201ENST00000349511 ZNF692Q9BU19 519 aaPredicted RBP17.8■□□□□ 0.44
UBA3-201ENST00000349511 ITSN1Q15811 1721 aa17.8■□□□□ 0.44
UBA3-201ENST00000349511 EDC4Q6P2E9 1401 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms