RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 CFAP53Q96M91 514 aa18.17■□□□□ 0.5
TRIM4-201ENST00000349062 NOP58Q9Y2X3 529 aaKnown RBP18.17■□□□□ 0.5
TRIM4-201ENST00000349062 RIMBP3CA6NJZ7 1639 aa18.17■□□□□ 0.5
TRIM4-201ENST00000349062 RIMBP3BA6NNM3 1639 aa18.17■□□□□ 0.5
TRIM4-201ENST00000349062 RIMBP3Q9UFD9 1639 aa18.17■□□□□ 0.5
TRIM4-201ENST00000349062 SLC24A1O60721 1099 aa18.16■□□□□ 0.5
TRIM4-201ENST00000349062 PIK3C2GO75747 1445 aa18.16■□□□□ 0.5
TRIM4-201ENST00000349062 DIP2CQ9Y2E4 1556 aa18.16■□□□□ 0.5
TRIM4-201ENST00000349062 RTL5Q5HYW3 569 aaPredicted RBP18.16■□□□□ 0.5
TRIM4-201ENST00000349062 TCP11L2Q8N4U5 519 aa18.15■□□□□ 0.5
TRIM4-201ENST00000349062 DUSP27Q5VZP5 1158 aa18.15■□□□□ 0.5
TRIM4-201ENST00000349062 CLUAP1Q96AJ1 413 aa18.15■□□□□ 0.5
TRIM4-201ENST00000349062 IQGAP1P46940 1657 aa18.15■□□□□ 0.5
TRIM4-201ENST00000349062 SLC26A8Q96RN1 970 aa18.14■□□□□ 0.5
TRIM4-201ENST00000349062 RTN4Q9NQC3 1192 aaKnown RBP18.14■□□□□ 0.49
TRIM4-201ENST00000349062 LAS1LQ9Y4W2 734 aaKnown RBP18.14■□□□□ 0.49
TRIM4-201ENST00000349062 MYOM2P54296 1465 aa18.13■□□□□ 0.49
TRIM4-201ENST00000349062 CFAP74Q9C0B2 1584 aa18.13■□□□□ 0.49
TRIM4-201ENST00000349062 RGS3P49796 1198 aa18.12■□□□□ 0.49
TRIM4-201ENST00000349062 ADGRB3O60242 1522 aa18.12■□□□□ 0.49
TRIM4-201ENST00000349062 ZRANB1Q9UGI0 708 aa18.11■□□□□ 0.49
TRIM4-201ENST00000349062 KDM5AP29375 1690 aaKnown RBP18.11■□□□□ 0.49
TRIM4-201ENST00000349062 HDGFL2Q7Z4V5 671 aaPredicted RBP18.11■□□□□ 0.49
TRIM4-201ENST00000349062 TERF2IPQ9NYB0 399 aa18.11■□□□□ 0.49
TRIM4-201ENST00000349062 ANP32AP39687 249 aaKnown RBP18.1■□□□□ 0.49
TRIM4-201ENST00000349062 LAMC1P11047 1609 aa18.1■□□□□ 0.49
TRIM4-201ENST00000349062 SIGLEC1Q9BZZ2 1709 aa18.09■□□□□ 0.49
TRIM4-201ENST00000349062 SLFN5Q08AF3 891 aa18.09■□□□□ 0.49
TRIM4-201ENST00000349062 HMOX1P09601 288 aa18.09■□□□□ 0.49
TRIM4-201ENST00000349062 CAMSAP1Q5T5Y3 1602 aa18.08■□□□□ 0.49
TRIM4-201ENST00000349062 RNF123Q5XPI4 1314 aa18.08■□□□□ 0.49
TRIM4-201ENST00000349062 PANK1Q8TE04 598 aa18.08■□□□□ 0.48
TRIM4-201ENST00000349062 TSR2Q969E8 191 aaKnown RBP18.08■□□□□ 0.48
TRIM4-201ENST00000349062 SYNMO15061 1565 aa18.08■□□□□ 0.48
TRIM4-201ENST00000349062 WWC1Q8IX03 1113 aa18.08■□□□□ 0.48
TRIM4-201ENST00000349062 RBM33Q96EV2 1170 aaKnown RBP18.08■□□□□ 0.48
TRIM4-201ENST00000349062 ZBTB47Q9UFB7 747 aaPredicted RBP18.08■□□□□ 0.48
TRIM4-201ENST00000349062 A0A1W2PP64 1363 aa18.07■□□□□ 0.48
TRIM4-201ENST00000349062 LMTK2Q8IWU2 1503 aa18.07■□□□□ 0.48
TRIM4-201ENST00000349062 COG6Q9Y2V7 657 aa18.07■□□□□ 0.48
TRIM4-201ENST00000349062 BLMP54132 1417 aaPredicted RBP18.07■□□□□ 0.48
TRIM4-201ENST00000349062 FYB1O15117 783 aa18.06■□□□□ 0.48
TRIM4-201ENST00000349062 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.05■□□□□ 0.48
TRIM4-201ENST00000349062 RUNDC1Q96C34 613 aa18.05■□□□□ 0.48
TRIM4-201ENST00000349062 TNNQ9UQP3 1299 aa18.05■□□□□ 0.48
TRIM4-201ENST00000349062 MAPK8IP3Q9UPT6 1336 aa18.05■□□□□ 0.48
TRIM4-201ENST00000349062 YTHDC2Q9H6S0 1430 aaKnown RBP18.04■□□□□ 0.48
TRIM4-201ENST00000349062 TCERG1O14776 1098 aaKnown RBP18.04■□□□□ 0.48
TRIM4-201ENST00000349062 NME9Q86XW9 330 aa18.04■□□□□ 0.48
TRIM4-201ENST00000349062 ZMYM3Q14202 1370 aa18.03■□□□□ 0.48
TRIM4-201ENST00000349062 RRS1Q15050 365 aaKnown RBP18.03■□□□□ 0.48
TRIM4-201ENST00000349062 E9PSI1 815 aa18.03■□□□□ 0.48
TRIM4-201ENST00000349062 RICTORQ6R327 1708 aa18.02■□□□□ 0.48
TRIM4-201ENST00000349062 ELL2O00472 640 aaPredicted RBP18.02■□□□□ 0.48
TRIM4-201ENST00000349062 MYO5BQ9ULV0 1848 aa18.01■□□□□ 0.47
TRIM4-201ENST00000349062 RIMS2Q9UQ26 1411 aa18.01■□□□□ 0.47
TRIM4-201ENST00000349062 GLI2P10070 1586 aa18.01■□□□□ 0.47
TRIM4-201ENST00000349062 THUMPD2Q9BTF0 503 aaKnown RBP18.01■□□□□ 0.47
TRIM4-201ENST00000349062 ADGRB1O14514 1584 aa18.01■□□□□ 0.47
TRIM4-201ENST00000349062 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
TRIM4-201ENST00000349062 EMILIN1Q9Y6C2 1016 aa18■□□□□ 0.47
TRIM4-201ENST00000349062 QRICH2Q9H0J4 1663 aa18■□□□□ 0.47
TRIM4-201ENST00000349062 MYOM1P52179 1685 aa18■□□□□ 0.47
TRIM4-201ENST00000349062 NEXMIFQ5QGS0 1516 aa18■□□□□ 0.47
TRIM4-201ENST00000349062 ANO8Q9HCE9 1232 aaPredicted RBP18■□□□□ 0.47
TRIM4-201ENST00000349062 ANKRD36BQ8N2N9 1353 aa18■□□□□ 0.47
TRIM4-201ENST00000349062 C14orf37Q86TY3 774 aa17.99■□□□□ 0.47
TRIM4-201ENST00000349062 NRXN1Q9ULB1 1477 aa17.99■□□□□ 0.47
TRIM4-201ENST00000349062 DIP2BQ9P265 1576 aa17.99■□□□□ 0.47
TRIM4-201ENST00000349062 PPLO60437 1756 aa17.99■□□□□ 0.47
TRIM4-201ENST00000349062 PIK3C2BO00750 1634 aa17.99■□□□□ 0.47
TRIM4-201ENST00000349062 ZMYM4Q5VZL5 1548 aa17.99■□□□□ 0.47
TRIM4-201ENST00000349062 NUTM2GQ5VZR2 741 aa17.99■□□□□ 0.47
TRIM4-201ENST00000349062 METP08581 1390 aa17.98■□□□□ 0.47
TRIM4-201ENST00000349062 ZBTB7CA1YPR0 619 aa17.97■□□□□ 0.47
TRIM4-201ENST00000349062 DIAPH1O60610 1272 aaKnown RBP17.97■□□□□ 0.47
TRIM4-201ENST00000349062 RIPK4P57078 832 aa17.97■□□□□ 0.47
TRIM4-201ENST00000349062 NEFMP07197 916 aa17.97■□□□□ 0.47
TRIM4-201ENST00000349062 SBNO2Q9Y2G9 1366 aa17.97■□□□□ 0.47
TRIM4-201ENST00000349062 TULP4Q9NRJ4 1543 aa17.97■□□□□ 0.47
TRIM4-201ENST00000349062 NUDT16Q96DE0 195 aaKnown RBP17.97■□□□□ 0.47
TRIM4-201ENST00000349062 ZNF521Q96K83 1311 aa17.96■□□□□ 0.47
TRIM4-201ENST00000349062 LTKP29376 864 aa17.96■□□□□ 0.46
TRIM4-201ENST00000349062 NPC1L1Q9UHC9 1359 aa17.95■□□□□ 0.46
TRIM4-201ENST00000349062 PDE4AP27815 886 aa17.94■□□□□ 0.46
TRIM4-201ENST00000349062 PRKAR2BP31323 418 aa17.94■□□□□ 0.46
TRIM4-201ENST00000349062 ARHGAP31Q2M1Z3 1444 aa17.94■□□□□ 0.46
TRIM4-201ENST00000349062 CLTCQ00610 1675 aaKnown RBP17.94■□□□□ 0.46
TRIM4-201ENST00000349062 WASLO00401 505 aaPredicted RBP17.94■□□□□ 0.46
TRIM4-201ENST00000349062 IPO9Q96P70 1041 aaKnown RBP17.94■□□□□ 0.46
TRIM4-201ENST00000349062 POLR3AO14802 1390 aaPredicted RBP17.94■□□□□ 0.46
TRIM4-201ENST00000349062 EXOSC9Q06265 439 aaKnown RBP17.93■□□□□ 0.46
TRIM4-201ENST00000349062 IFT172Q9UG01 1749 aa17.93■□□□□ 0.46
TRIM4-201ENST00000349062 ATAD2Q6PL18 1390 aa17.93■□□□□ 0.46
TRIM4-201ENST00000349062 HDGFP51858 240 aaKnown RBP17.93■□□□□ 0.46
TRIM4-201ENST00000349062 KIAA1210Q9ULL0 1709 aa17.92■□□□□ 0.46
TRIM4-201ENST00000349062 IL27Q8NEV9 243 aa17.92■□□□□ 0.46
TRIM4-201ENST00000349062 SMC4Q9NTJ3 1288 aa17.92■□□□□ 0.46
TRIM4-201ENST00000349062 FTSJ3Q8IY81 847 aaKnown RBP17.91■□□□□ 0.46
TRIM4-201ENST00000349062 TNRQ92752 1358 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms