RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 PLEKHH1Q9ULM0 1364 aa15.06■□□□□ 0
ECM1-201ENST00000346569 TULP4Q9NRJ4 1543 aa15.05■□□□□ -0
ECM1-201ENST00000346569 MINK1Q8N4C8 1332 aaPredicted RBP15.05■□□□□ -0
ECM1-201ENST00000346569 FBXO41Q8TF61 875 aa15.05■□□□□ -0
ECM1-201ENST00000346569 SLC12A5Q9H2X9 1139 aa15.04■□□□□ -0
ECM1-201ENST00000346569 AMOTL2Q9Y2J4 779 aa15.04■□□□□ -0
ECM1-201ENST00000346569 PIK3R4Q99570 1358 aa15.03■□□□□ -0
ECM1-201ENST00000346569 RALBP1Q15311 655 aa15.03■□□□□ -0
ECM1-201ENST00000346569 CDK19Q9BWU1 502 aa15.03■□□□□ -0
ECM1-201ENST00000346569 CABP2Q9NPB3 220 aa15.03■□□□□ -0
ECM1-201ENST00000346569 KTN1Q86UP2 1357 aaKnown RBP15.03■□□□□ -0
ECM1-201ENST00000346569 ROBO2Q9HCK4 1378 aa15.03■□□□□ -0
ECM1-201ENST00000346569 CARD14Q9BXL6 1004 aa15.02■□□□□ -0
ECM1-201ENST00000346569 DMRT2Q9Y5R5 561 aa15.02■□□□□ -0
ECM1-201ENST00000346569 DIP2AQ14689 1571 aa15.02□□□□□ -0.01
ECM1-201ENST00000346569 CCDC184Q52MB2 194 aa15.01□□□□□ -0.01
ECM1-201ENST00000346569 AMER1Q5JTC6 1135 aaPredicted RBP15.01□□□□□ -0.01
ECM1-201ENST00000346569 KNSTRNQ9Y448 316 aa15.01□□□□□ -0.01
ECM1-201ENST00000346569 CPS1P31327 1500 aa15.01□□□□□ -0.01
ECM1-201ENST00000346569 KNDC1Q76NI1 1749 aa15.01□□□□□ -0.01
ECM1-201ENST00000346569 MYOM1P52179 1685 aa15.01□□□□□ -0.01
ECM1-201ENST00000346569 NPC1L1Q9UHC9 1359 aa15□□□□□ -0.01
ECM1-201ENST00000346569 WASLO00401 505 aaPredicted RBP15□□□□□ -0.01
ECM1-201ENST00000346569 SRPK2P78362 688 aaKnown RBP15□□□□□ -0.01
ECM1-201ENST00000346569 PARD3Q8TEW0 1356 aa14.99□□□□□ -0.01
ECM1-201ENST00000346569 NCKAP5LQ9HCH0 1330 aa14.99□□□□□ -0.01
ECM1-201ENST00000346569 TMC1Q8TDI8 760 aa14.99□□□□□ -0.01
ECM1-201ENST00000346569 ATAD2Q6PL18 1390 aa14.98□□□□□ -0.01
ECM1-201ENST00000346569 CERKQ8TCT0 537 aa14.98□□□□□ -0.01
ECM1-201ENST00000346569 NPHP4O75161 1426 aaPredicted RBP14.97□□□□□ -0.01
ECM1-201ENST00000346569 LTBP4Q8N2S1 1624 aa14.97□□□□□ -0.01
ECM1-201ENST00000346569 NINLQ9Y2I6 1382 aa14.97□□□□□ -0.01
ECM1-201ENST00000346569 PTCH1Q13635 1447 aa14.96□□□□□ -0.01
ECM1-201ENST00000346569 KCNA6P17658 529 aa14.96□□□□□ -0.01
ECM1-201ENST00000346569 CNGB1Q14028 1251 aaPredicted RBP14.96□□□□□ -0.01
ECM1-201ENST00000346569 CC2D1BQ5T0F9 858 aaKnown RBP14.96□□□□□ -0.01
ECM1-201ENST00000346569 MYBBP1AQ9BQG0 1328 aaKnown RBP14.96□□□□□ -0.02
ECM1-201ENST00000346569 ANKRD36BQ8N2N9 1353 aa14.95□□□□□ -0.02
ECM1-201ENST00000346569 YTHDC1Q96MU7 727 aaKnown RBP14.94□□□□□ -0.02
ECM1-201ENST00000346569 CABP1Q9NZU7 370 aa14.94□□□□□ -0.02
ECM1-201ENST00000346569 MRS2Q9HD23 443 aa14.93□□□□□ -0.02
ECM1-201ENST00000346569 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.93□□□□□ -0.02
ECM1-201ENST00000346569 XRN1Q8IZH2 1706 aaKnown RBP14.93□□□□□ -0.02
ECM1-201ENST00000346569 NUDT16Q96DE0 195 aaKnown RBP14.92□□□□□ -0.02
ECM1-201ENST00000346569 BRD4O60885 1362 aaPredicted RBP14.92□□□□□ -0.02
ECM1-201ENST00000346569 TERF2IPQ9NYB0 399 aa14.92□□□□□ -0.02
ECM1-201ENST00000346569 CCDC61Q9Y6R9 512 aa14.92□□□□□ -0.02
ECM1-201ENST00000346569 CHD2O14647 1828 aaKnown RBP14.91□□□□□ -0.02
ECM1-201ENST00000346569 CD163L1Q9NR16 1453 aa14.91□□□□□ -0.02
ECM1-201ENST00000346569 NLRP13Q86W25 1043 aa14.91□□□□□ -0.02
ECM1-201ENST00000346569 PRR36Q9H6K5 1346 aa14.9□□□□□ -0.02
ECM1-201ENST00000346569 ADGRB2O60241 1585 aa14.9□□□□□ -0.02
ECM1-201ENST00000346569 NSD3Q9BZ95 1437 aa14.9□□□□□ -0.02
ECM1-201ENST00000346569 PNISRQ8TF01 805 aaKnown RBP14.9□□□□□ -0.02
ECM1-201ENST00000346569 IQSEC2Q5JU85 1478 aa14.9□□□□□ -0.02
ECM1-201ENST00000346569 A0A1W2PP64 1363 aa14.89□□□□□ -0.03
ECM1-201ENST00000346569 PLEKHG3A1L390 1219 aa14.88□□□□□ -0.03
ECM1-201ENST00000346569 PPP2R1AP30153 589 aa14.88□□□□□ -0.03
ECM1-201ENST00000346569 HDGFL2Q7Z4V5 671 aaPredicted RBP14.88□□□□□ -0.03
ECM1-201ENST00000346569 CPSF1Q10570 1443 aaKnown RBP14.87□□□□□ -0.03
ECM1-201ENST00000346569 CGNL1Q0VF96 1302 aa14.87□□□□□ -0.03
ECM1-201ENST00000346569 ATP7BP35670 1465 aa14.86□□□□□ -0.03
ECM1-201ENST00000346569 FYB1O15117 783 aa14.85□□□□□ -0.03
ECM1-201ENST00000346569 CENPBP07199 599 aaPredicted RBP14.85□□□□□ -0.03
ECM1-201ENST00000346569 ZNF692Q9BU19 519 aaPredicted RBP14.85□□□□□ -0.03
ECM1-201ENST00000346569 PPIP5K1Q6PFW1 1433 aa14.85□□□□□ -0.03
ECM1-201ENST00000346569 FAM9BQ8IZU0 186 aa14.84□□□□□ -0.03
ECM1-201ENST00000346569 USP32Q8NFA0 1604 aa14.84□□□□□ -0.03
ECM1-201ENST00000346569 MORC1Q86VD1 984 aa14.83□□□□□ -0.03
ECM1-201ENST00000346569 ZNF335Q9H4Z2 1342 aaPredicted RBP14.83□□□□□ -0.03
ECM1-201ENST00000346569 NSD2O96028 1365 aa14.83□□□□□ -0.03
ECM1-201ENST00000346569 NWD1Q149M9 1564 aa14.82□□□□□ -0.04
ECM1-201ENST00000346569 NUTM2FA1L443 756 aa14.82□□□□□ -0.04
ECM1-201ENST00000346569 PHF23Q9BUL5 403 aaPredicted RBP14.82□□□□□ -0.04
ECM1-201ENST00000346569 PROSER2Q86WR7 435 aaPredicted RBP14.81□□□□□ -0.04
ECM1-201ENST00000346569 RBM33Q96EV2 1170 aaKnown RBP14.81□□□□□ -0.04
ECM1-201ENST00000346569 ACEP12821 1306 aa14.8□□□□□ -0.04
ECM1-201ENST00000346569 EDC4Q6P2E9 1401 aaKnown RBP14.79□□□□□ -0.04
ECM1-201ENST00000346569 ANKARQ7Z5J8 1434 aa14.79□□□□□ -0.04
ECM1-201ENST00000346569 CDC42BPGQ6DT37 1551 aa14.79□□□□□ -0.04
ECM1-201ENST00000346569 GGNBP2Q9H3C7 697 aa14.79□□□□□ -0.04
ECM1-201ENST00000346569 ADGRL3Q9HAR2 1447 aa14.79□□□□□ -0.04
ECM1-201ENST00000346569 POLR3AO14802 1390 aaPredicted RBP14.78□□□□□ -0.04
ECM1-201ENST00000346569 NCOA3Q9Y6Q9 1424 aa14.77□□□□□ -0.04
ECM1-201ENST00000346569 TOPAZ1Q8N9V7 1692 aa14.77□□□□□ -0.05
ECM1-201ENST00000346569 NKTRP30414 1462 aaKnown RBP14.76□□□□□ -0.05
ECM1-201ENST00000346569 HNRNPUQ00839 825 aaKnown RBP eCLIP14.76□□□□□ -0.05
ECM1-201ENST00000346569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.76□□□□□ -0.05
ECM1-201ENST00000346569 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
ECM1-201ENST00000346569 C19orf44Q9H6X5 657 aa14.76□□□□□ -0.05
ECM1-201ENST00000346569 SSH2Q76I76 1423 aa14.76□□□□□ -0.05
ECM1-201ENST00000346569 INSRP06213 1382 aa14.76□□□□□ -0.05
ECM1-201ENST00000346569 TTC21BQ7Z4L5 1316 aa14.76□□□□□ -0.05
ECM1-201ENST00000346569 FMN2Q9NZ56 1722 aa14.75□□□□□ -0.05
ECM1-201ENST00000346569 TNNT2P45379 298 aaPredicted RBP14.75□□□□□ -0.05
ECM1-201ENST00000346569 MTHFSP49914 203 aa14.75□□□□□ -0.05
ECM1-201ENST00000346569 NALCNQ8IZF0 1738 aa14.74□□□□□ -0.05
ECM1-201ENST00000346569 USP6P35125 1406 aa14.74□□□□□ -0.05
ECM1-201ENST00000346569 AKAP12Q02952 1782 aa14.74□□□□□ -0.05
ECM1-201ENST00000346569 NME9Q86XW9 330 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms