RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 PRAM1Q96QH2 718 aa22.7■■□□□ 1.22
TSPAN4-201ENST00000346501 CDC42BPGQ6DT37 1551 aa22.7■■□□□ 1.22
TSPAN4-201ENST00000346501 AHDC1Q5TGY3 1603 aaPredicted RBP22.7■■□□□ 1.22
TSPAN4-201ENST00000346501 SAFB2Q14151 953 aaKnown RBP eCLIP22.68■■□□□ 1.22
TSPAN4-201ENST00000346501 ESCO1Q5FWF5 840 aa22.68■■□□□ 1.22
TSPAN4-201ENST00000346501 LRRC59Q96AG4 307 aaKnown RBP22.68■■□□□ 1.22
TSPAN4-201ENST00000346501 SIN3AQ96ST3 1273 aa22.68■■□□□ 1.22
TSPAN4-201ENST00000346501 DLC1Q96QB1 1528 aa22.67■■□□□ 1.22
TSPAN4-201ENST00000346501 PLEKHH1Q9ULM0 1364 aa22.67■■□□□ 1.22
TSPAN4-201ENST00000346501 SPATA31A6Q5VVP1 1343 aa22.65■■□□□ 1.22
TSPAN4-201ENST00000346501 L3MBTL2Q969R5 705 aa22.65■■□□□ 1.22
TSPAN4-201ENST00000346501 ORAI2Q96SN7 254 aa22.65■■□□□ 1.22
TSPAN4-201ENST00000346501 COL16A1Q07092 1604 aaPredicted RBP22.64■■□□□ 1.22
TSPAN4-201ENST00000346501 ADGRB1O14514 1584 aa22.64■■□□□ 1.22
TSPAN4-201ENST00000346501 NUTM2FA1L443 756 aa22.64■■□□□ 1.21
TSPAN4-201ENST00000346501 NPHP3Q7Z494 1330 aa22.62■■□□□ 1.21
TSPAN4-201ENST00000346501 MEX3CQ5U5Q3 659 aaKnown RBP22.62■■□□□ 1.21
TSPAN4-201ENST00000346501 EIF3AQ14152 1382 aaKnown RBP22.61■■□□□ 1.21
TSPAN4-201ENST00000346501 NHSL1Q5SYE7 1610 aa22.6■■□□□ 1.21
TSPAN4-201ENST00000346501 KIAA1210Q9ULL0 1709 aa22.6■■□□□ 1.21
TSPAN4-201ENST00000346501 DDX17Q92841 729 aaKnown RBP22.59■■□□□ 1.21
TSPAN4-201ENST00000346501 MINK1Q8N4C8 1332 aaPredicted RBP22.58■■□□□ 1.21
TSPAN4-201ENST00000346501 TONSLQ96HA7 1378 aa22.58■■□□□ 1.21
TSPAN4-201ENST00000346501 FOXO3O43524 673 aa22.56■■□□□ 1.2
TSPAN4-201ENST00000346501 ILDR2Q71H61 639 aa22.56■■□□□ 1.2
TSPAN4-201ENST00000346501 HIRIP3Q9BW71 556 aaPredicted RBP22.56■■□□□ 1.2
TSPAN4-201ENST00000346501 FMN2Q9NZ56 1722 aa22.55■■□□□ 1.2
TSPAN4-201ENST00000346501 NUTM2BA6NNL0 878 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-201ENST00000346501 NUTM2EB1AL46 878 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-201ENST00000346501 NUTM2AQ8IVF1 878 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-201ENST00000346501 SHPRHQ149N8 1683 aa22.55■■□□□ 1.2
TSPAN4-201ENST00000346501 SOS2Q07890 1332 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-201ENST00000346501 SOCS7O14512 581 aa22.54■■□□□ 1.2
TSPAN4-201ENST00000346501 NBPF1Q3BBV0 1214 aa22.54■■□□□ 1.2
TSPAN4-201ENST00000346501 PHF8Q9UPP1 1060 aa22.54■■□□□ 1.2
TSPAN4-201ENST00000346501 PCGF6Q9BYE7 350 aa22.53■■□□□ 1.2
TSPAN4-201ENST00000346501 ANKARQ7Z5J8 1434 aa22.53■■□□□ 1.2
TSPAN4-201ENST00000346501 WASLO00401 505 aaPredicted RBP22.52■■□□□ 1.2
TSPAN4-201ENST00000346501 PSME1Q06323 249 aa22.52■■□□□ 1.2
TSPAN4-201ENST00000346501 ADGRB2O60241 1585 aa22.51■■□□□ 1.19
TSPAN4-201ENST00000346501 KIF1AQ12756 1690 aa22.51■■□□□ 1.19
TSPAN4-201ENST00000346501 ROCK2O75116 1388 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-201ENST00000346501 PNPLA6Q8IY17 1366 aa22.5■■□□□ 1.19
TSPAN4-201ENST00000346501 ARHGEF28Q8N1W1 1705 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-201ENST00000346501 XPCQ01831 940 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-201ENST00000346501 CENPJQ9HC77 1338 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-201ENST00000346501 KRT28Q7Z3Y7 464 aa22.47■■□□□ 1.19
TSPAN4-201ENST00000346501 ZNF772Q68DY9 489 aaPredicted RBP22.46■■□□□ 1.19
TSPAN4-201ENST00000346501 PMFBP1Q8TBY8 1022 aa22.45■■□□□ 1.18
TSPAN4-201ENST00000346501 GPRASP1Q5JY77 1395 aa22.45■■□□□ 1.18
TSPAN4-201ENST00000346501 TULP4Q9NRJ4 1543 aa22.45■■□□□ 1.18
TSPAN4-201ENST00000346501 NGDNQ8NEJ9 315 aaKnown RBP22.44■■□□□ 1.18
TSPAN4-201ENST00000346501 PXDNQ92626 1479 aa22.43■■□□□ 1.18
TSPAN4-201ENST00000346501 CDK19Q9BWU1 502 aa22.43■■□□□ 1.18
TSPAN4-201ENST00000346501 LRP6O75581 1613 aa22.42■■□□□ 1.18
TSPAN4-201ENST00000346501 TRPM1Q7Z4N2 1603 aa22.42■■□□□ 1.18
TSPAN4-201ENST00000346501 RGPD8O14715 1765 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-201ENST00000346501 CLSPNQ9HAW4 1339 aa22.41■■□□□ 1.18
TSPAN4-201ENST00000346501 HAP1P54257 671 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-201ENST00000346501 SRPK2P78362 688 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-201ENST00000346501 LMOD2Q6P5Q4 547 aa22.41■■□□□ 1.18
TSPAN4-201ENST00000346501 NUDT16Q96DE0 195 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-201ENST00000346501 RGS17Q9UGC6 210 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-201ENST00000346501 SPATA31A3Q5VYP0 1347 aa22.4■■□□□ 1.18
TSPAN4-201ENST00000346501 ADAMTS2O95450 1211 aa22.4■■□□□ 1.18
TSPAN4-201ENST00000346501 C8orf37Q96NL8 207 aa22.4■■□□□ 1.18
TSPAN4-201ENST00000346501 CARD11Q9BXL7 1154 aa22.4■■□□□ 1.18
TSPAN4-201ENST00000346501 NGLY1Q96IV0 654 aa22.39■■□□□ 1.17
TSPAN4-201ENST00000346501 PRR36Q9H6K5 1346 aa22.38■■□□□ 1.17
TSPAN4-201ENST00000346501 NBPF8Q3BBV2 869 aa22.38■■□□□ 1.17
TSPAN4-201ENST00000346501 CCDC61Q9Y6R9 512 aa22.38■■□□□ 1.17
TSPAN4-201ENST00000346501 SBNO1A3KN83 1393 aa22.38■■□□□ 1.17
TSPAN4-201ENST00000346501 ARHGEF10O15013 1369 aa22.38■■□□□ 1.17
TSPAN4-201ENST00000346501 AFF2P51816 1311 aa22.36■■□□□ 1.17
TSPAN4-201ENST00000346501 EVC2Q86UK5 1308 aa22.36■■□□□ 1.17
TSPAN4-201ENST00000346501 USP32Q8NFA0 1604 aa22.36■■□□□ 1.17
TSPAN4-201ENST00000346501 TNS3Q68CZ2 1445 aa22.36■■□□□ 1.17
TSPAN4-201ENST00000346501 ITSN1Q15811 1721 aa22.36■■□□□ 1.17
TSPAN4-201ENST00000346501 POTEAQ6S8J7 498 aa22.35■■□□□ 1.17
TSPAN4-201ENST00000346501 PAK3O75914 559 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-201ENST00000346501 TIMELESSQ9UNS1 1208 aa22.34■■□□□ 1.17
TSPAN4-201ENST00000346501 COL22A1Q8NFW1 1626 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-201ENST00000346501 QRICH2Q9H0J4 1663 aa22.33■■□□□ 1.17
TSPAN4-201ENST00000346501 CCER1Q8TC90 406 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-201ENST00000346501 ATP7BP35670 1465 aa22.33■■□□□ 1.16
TSPAN4-201ENST00000346501 RALGAPBQ86X10 1494 aa22.32■■□□□ 1.16
TSPAN4-201ENST00000346501 CABP2Q9NPB3 220 aa22.31■■□□□ 1.16
TSPAN4-201ENST00000346501 RXRBP28702 533 aa22.3■■□□□ 1.16
TSPAN4-201ENST00000346501 PLEKHG3A1L390 1219 aa22.29■■□□□ 1.16
TSPAN4-201ENST00000346501 PLEKHG5O94827 1062 aa22.29■■□□□ 1.16
TSPAN4-201ENST00000346501 SLC24A1O60721 1099 aa22.28■■□□□ 1.16
TSPAN4-201ENST00000346501 USP21Q9UK80 565 aa22.28■■□□□ 1.16
TSPAN4-201ENST00000346501 ACEP12821 1306 aa22.28■■□□□ 1.16
TSPAN4-201ENST00000346501 PPIP5K1Q6PFW1 1433 aa22.27■■□□□ 1.16
TSPAN4-201ENST00000346501 QTRT2Q9H974 415 aaKnown RBP22.27■■□□□ 1.16
TSPAN4-201ENST00000346501 POLR3AO14802 1390 aaPredicted RBP22.25■■□□□ 1.15
TSPAN4-201ENST00000346501 FNBP4Q8N3X1 1017 aaPredicted RBP22.24■■□□□ 1.15
TSPAN4-201ENST00000346501 TRPC5Q9UL62 973 aaPredicted RBP22.24■■□□□ 1.15
TSPAN4-201ENST00000346501 SBNO2Q9Y2G9 1366 aa22.24■■□□□ 1.15
TSPAN4-201ENST00000346501 RBM6P78332 1123 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms