RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 ZNF518AQ6AHZ1 1483 aa29.87■■■□□ 2.37
NKX2-3-201ENST00000344586 PANK1Q8TE04 598 aa29.86■■■□□ 2.37
NKX2-3-201ENST00000344586 TRAK1Q9UPV9 953 aa29.85■■■□□ 2.37
NKX2-3-201ENST00000344586 NPATQ14207 1427 aa29.85■■■□□ 2.37
NKX2-3-201ENST00000344586 COG6Q9Y2V7 657 aa29.84■■■□□ 2.37
NKX2-3-201ENST00000344586 CANXP27824 592 aaKnown RBP29.84■■■□□ 2.37
NKX2-3-201ENST00000344586 RUNDC1Q96C34 613 aa29.84■■■□□ 2.37
NKX2-3-201ENST00000344586 SLC12A5Q9H2X9 1139 aa29.84■■■□□ 2.37
NKX2-3-201ENST00000344586 C14orf93Q9H972 538 aaKnown RBP29.84■■■□□ 2.37
NKX2-3-201ENST00000344586 PHF23Q9BUL5 403 aaPredicted RBP29.83■■■□□ 2.37
NKX2-3-201ENST00000344586 FRMPD1Q5SYB0 1578 aa29.82■■■□□ 2.36
NKX2-3-201ENST00000344586 IL27Q8NEV9 243 aa29.82■■■□□ 2.36
NKX2-3-201ENST00000344586 CHGAP10645 457 aaKnown RBP29.81■■■□□ 2.36
NKX2-3-201ENST00000344586 TNNT2P45379 298 aaPredicted RBP29.81■■■□□ 2.36
NKX2-3-201ENST00000344586 RRP7AQ9Y3A4 280 aaKnown RBP29.81■■■□□ 2.36
NKX2-3-201ENST00000344586 USP19O94966 1318 aa29.81■■■□□ 2.36
NKX2-3-201ENST00000344586 MAPK8IP3Q9UPT6 1336 aa29.8■■■□□ 2.36
NKX2-3-201ENST00000344586 RARSP54136 660 aaKnown RBP29.79■■■□□ 2.36
NKX2-3-201ENST00000344586 GSE1Q14687 1217 aa29.79■■■□□ 2.36
NKX2-3-201ENST00000344586 TCP11L2Q8N4U5 519 aa29.79■■■□□ 2.36
NKX2-3-201ENST00000344586 NEUROD2Q15784 382 aa29.78■■■□□ 2.36
NKX2-3-201ENST00000344586 HECW2Q9P2P5 1572 aa29.78■■■□□ 2.36
NKX2-3-201ENST00000344586 FRAT1Q92837 279 aaPredicted RBP29.76■■■□□ 2.36
NKX2-3-201ENST00000344586 TMEM132EQ6IEE7 984 aa29.75■■■□□ 2.35
NKX2-3-201ENST00000344586 WDR63Q8IWG1 891 aa29.75■■■□□ 2.35
NKX2-3-201ENST00000344586 GLI2P10070 1586 aa29.75■■■□□ 2.35
NKX2-3-201ENST00000344586 MTHFSP49914 203 aa29.73■■■□□ 2.35
NKX2-3-201ENST00000344586 POGZQ7Z3K3 1410 aa29.73■■■□□ 2.35
NKX2-3-201ENST00000344586 TULP4Q9NRJ4 1543 aa29.73■■■□□ 2.35
NKX2-3-201ENST00000344586 NLRP1Q9C000 1473 aa29.73■■■□□ 2.35
NKX2-3-201ENST00000344586 CCDC27Q2M243 656 aa29.72■■■□□ 2.35
NKX2-3-201ENST00000344586 ABCC3O15438 1527 aa29.72■■■□□ 2.35
NKX2-3-201ENST00000344586 ARHGEF28Q8N1W1 1705 aaKnown RBP29.72■■■□□ 2.35
NKX2-3-201ENST00000344586 RPGRIP1LQ68CZ1 1315 aa29.71■■■□□ 2.35
NKX2-3-201ENST00000344586 RLBP1P12271 317 aa29.71■■■□□ 2.35
NKX2-3-201ENST00000344586 AAMPQ13685 434 aa29.71■■■□□ 2.35
NKX2-3-201ENST00000344586 SEC24BO95487 1268 aa29.7■■■□□ 2.35
NKX2-3-201ENST00000344586 TNNQ9UQP3 1299 aa29.7■■■□□ 2.35
NKX2-3-201ENST00000344586 CFAP65Q6ZU64 1925 aaKnown RBP29.7■■■□□ 2.34
NKX2-3-201ENST00000344586 MLH3Q9UHC1 1453 aa29.7■■■□□ 2.34
NKX2-3-201ENST00000344586 ADGRB2O60241 1585 aa29.7■■■□□ 2.34
NKX2-3-201ENST00000344586 CFAP74Q9C0B2 1584 aa29.69■■■□□ 2.34
NKX2-3-201ENST00000344586 CFAP53Q96M91 514 aa29.69■■■□□ 2.34
NKX2-3-201ENST00000344586 PMFBP1Q8TBY8 1022 aa29.68■■■□□ 2.34
NKX2-3-201ENST00000344586 CAMSAP1Q5T5Y3 1602 aa29.68■■■□□ 2.34
NKX2-3-201ENST00000344586 ANKRD36BQ8N2N9 1353 aa29.68■■■□□ 2.34
NKX2-3-201ENST00000344586 PCDHB15Q9Y5E8 787 aa29.68■■■□□ 2.34
NKX2-3-201ENST00000344586 NSD2O96028 1365 aa29.67■■■□□ 2.34
NKX2-3-201ENST00000344586 FRAT2O75474 233 aaPredicted RBP29.67■■■□□ 2.34
NKX2-3-201ENST00000344586 SIGLEC1Q9BZZ2 1709 aa29.67■■■□□ 2.34
NKX2-3-201ENST00000344586 ZMYM3Q14202 1370 aa29.66■■■□□ 2.34
NKX2-3-201ENST00000344586 PIK3C2BO00750 1634 aa29.65■■■□□ 2.34
NKX2-3-201ENST00000344586 GGT6Q6P531 493 aa29.65■■■□□ 2.34
NKX2-3-201ENST00000344586 PUS7Q96PZ0 661 aaKnown RBP29.65■■■□□ 2.34
NKX2-3-201ENST00000344586 BCL2L13Q9BXK5 485 aa29.65■■■□□ 2.34
NKX2-3-201ENST00000344586 NEXMIFQ5QGS0 1516 aa29.64■■■□□ 2.34
NKX2-3-201ENST00000344586 NCBP3Q53F19 620 aaKnown RBP29.64■■■□□ 2.34
NKX2-3-201ENST00000344586 EVC2Q86UK5 1308 aa29.63■■■□□ 2.33
NKX2-3-201ENST00000344586 MYH16Q9H6N6 1097 aa29.61■■■□□ 2.33
NKX2-3-201ENST00000344586 RTN4Q9NQC3 1192 aaKnown RBP29.59■■■□□ 2.33
NKX2-3-201ENST00000344586 BRPF3Q9ULD4 1205 aa29.58■■■□□ 2.33
NKX2-3-201ENST00000344586 PDZRN3Q9UPQ7 1066 aa29.58■■■□□ 2.33
NKX2-3-201ENST00000344586 CD109Q6YHK3 1445 aa29.58■■■□□ 2.33
NKX2-3-201ENST00000344586 U2AF1L5P0DN76 240 aaPredicted RBP29.57■■■□□ 2.32
NKX2-3-201ENST00000344586 U2AF1Q01081 240 aaKnown RBP eCLIP29.57■■■□□ 2.32
NKX2-3-201ENST00000344586 NUTM2DQ5VT03 806 aaPredicted RBP29.55■■■□□ 2.32
NKX2-3-201ENST00000344586 BECN1Q14457 450 aa29.54■■■□□ 2.32
NKX2-3-201ENST00000344586 MVPQ14764 893 aaKnown RBP29.54■■■□□ 2.32
NKX2-3-201ENST00000344586 CABP2Q9NPB3 220 aa29.54■■■□□ 2.32
NKX2-3-201ENST00000344586 RWDD1Q9H446 243 aaPredicted RBP29.54■■■□□ 2.32
NKX2-3-201ENST00000344586 ABCC11Q96J66 1382 aa29.53■■■□□ 2.32
NKX2-3-201ENST00000344586 COL3A1P02461 1466 aaPredicted RBP29.53■■■□□ 2.32
NKX2-3-201ENST00000344586 VGFO15240 615 aaPredicted RBP29.52■■■□□ 2.32
NKX2-3-201ENST00000344586 A0A1W2PP64 1363 aa29.51■■■□□ 2.32
NKX2-3-201ENST00000344586 TBC1D32Q96NH3 1257 aa29.51■■■□□ 2.31
NKX2-3-201ENST00000344586 ZKSCAN2Q63HK3 967 aa29.5■■■□□ 2.31
NKX2-3-201ENST00000344586 CT47B1P0C2W7 299 aaPredicted RBP29.49■■■□□ 2.31
NKX2-3-201ENST00000344586 TSR2Q969E8 191 aaKnown RBP29.48■■■□□ 2.31
NKX2-3-201ENST00000344586 PLEKHF1Q96S99 279 aa29.48■■■□□ 2.31
NKX2-3-201ENST00000344586 DZIP1LQ8IYY4 767 aaKnown RBP29.48■■■□□ 2.31
NKX2-3-201ENST00000344586 UPF2Q9HAU5 1272 aaKnown RBP29.48■■■□□ 2.31
NKX2-3-201ENST00000344586 FTSJ3Q8IY81 847 aaKnown RBP29.46■■■□□ 2.31
NKX2-3-201ENST00000344586 ANKRD26Q9UPS8 1709 aa29.46■■■□□ 2.31
NKX2-3-201ENST00000344586 DIP2CQ9Y2E4 1556 aa29.46■■■□□ 2.31
NKX2-3-201ENST00000344586 ZFYVE9O95405 1425 aa29.45■■■□□ 2.3
NKX2-3-201ENST00000344586 NPM1P06748 294 aaKnown RBP eCLIP29.44■■■□□ 2.3
NKX2-3-201ENST00000344586 SAFB2Q14151 953 aaKnown RBP eCLIP29.44■■■□□ 2.3
NKX2-3-201ENST00000344586 ANTXR1Q9H6X2 564 aa29.44■■■□□ 2.3
NKX2-3-201ENST00000344586 ARHGAP31Q2M1Z3 1444 aa29.44■■■□□ 2.3
NKX2-3-201ENST00000344586 SLKQ9H2G2 1235 aaPredicted RBP29.43■■■□□ 2.3
NKX2-3-201ENST00000344586 TRIM35Q9UPQ4 493 aa29.43■■■□□ 2.3
NKX2-3-201ENST00000344586 TMPOP42166 694 aaKnown RBP29.43■■■□□ 2.3
NKX2-3-201ENST00000344586 EXOSC9Q06265 439 aaKnown RBP29.43■■■□□ 2.3
NKX2-3-201ENST00000344586 SMC4Q9NTJ3 1288 aa29.43■■■□□ 2.3
NKX2-3-201ENST00000344586 PTPRMP28827 1452 aa29.42■■■□□ 2.3
NKX2-3-201ENST00000344586 MED14O60244 1454 aa29.41■■■□□ 2.3
NKX2-3-201ENST00000344586 U2SURPO15042 1029 aaKnown RBP29.41■■■□□ 2.3
NKX2-3-201ENST00000344586 GGNBP2Q9H3C7 697 aa29.41■■■□□ 2.3
NKX2-3-201ENST00000344586 CLTCQ00610 1675 aaKnown RBP29.41■■■□□ 2.3
NKX2-3-201ENST00000344586 TRIM27P14373 513 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms