RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 CFAP53Q96M91 514 aa12.76□□□□□ -0.37
UBE2D3-203ENST00000343106 KDM5AP29375 1690 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-203ENST00000343106 RLBP1P12271 317 aa12.75□□□□□ -0.37
UBE2D3-203ENST00000343106 MROH1Q8NDA8 1641 aa12.75□□□□□ -0.37
UBE2D3-203ENST00000343106 U2SURPO15042 1029 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-203ENST00000343106 NFKBIBQ15653 356 aa12.74□□□□□ -0.37
UBE2D3-203ENST00000343106 SEC24BO95487 1268 aa12.74□□□□□ -0.37
UBE2D3-203ENST00000343106 SRPK2P78362 688 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-203ENST00000343106 NGEFQ8N5V2 710 aa12.74□□□□□ -0.37
UBE2D3-203ENST00000343106 USP35Q9P2H5 1018 aa12.74□□□□□ -0.37
UBE2D3-203ENST00000343106 CD109Q6YHK3 1445 aa12.74□□□□□ -0.37
UBE2D3-203ENST00000343106 EFCAB6Q5THR3 1501 aa12.74□□□□□ -0.37
UBE2D3-203ENST00000343106 ABCA9Q8IUA7 1624 aa12.74□□□□□ -0.37
UBE2D3-203ENST00000343106 GGNBP2Q9H3C7 697 aa12.73□□□□□ -0.37
UBE2D3-203ENST00000343106 EVC2Q86UK5 1308 aa12.73□□□□□ -0.37
UBE2D3-203ENST00000343106 ZNF518AQ6AHZ1 1483 aa12.73□□□□□ -0.37
UBE2D3-203ENST00000343106 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-203ENST00000343106 PCDHB15Q9Y5E8 787 aa12.73□□□□□ -0.37
UBE2D3-203ENST00000343106 TSR2Q969E8 191 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-203ENST00000343106 SBNO2Q9Y2G9 1366 aa12.72□□□□□ -0.37
UBE2D3-203ENST00000343106 IDI1Q13907 227 aa12.72□□□□□ -0.37
UBE2D3-203ENST00000343106 PPRC1Q5VV67 1664 aaKnown RBP12.71□□□□□ -0.37
UBE2D3-203ENST00000343106 NRXN1Q9ULB1 1477 aa12.71□□□□□ -0.37
UBE2D3-203ENST00000343106 WDR63Q8IWG1 891 aa12.71□□□□□ -0.38
UBE2D3-203ENST00000343106 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.38
UBE2D3-203ENST00000343106 RPGRIP1LQ68CZ1 1315 aa12.7□□□□□ -0.38
UBE2D3-203ENST00000343106 MINK1Q8N4C8 1332 aaPredicted RBP12.7□□□□□ -0.38
UBE2D3-203ENST00000343106 IL27Q8NEV9 243 aa12.7□□□□□ -0.38
UBE2D3-203ENST00000343106 OSCARQ8IYS5 282 aa12.69□□□□□ -0.38
UBE2D3-203ENST00000343106 MROH2AA6NES4 1674 aa12.69□□□□□ -0.38
UBE2D3-203ENST00000343106 MYH16Q9H6N6 1097 aa12.69□□□□□ -0.38
UBE2D3-203ENST00000343106 KIDINS220Q9ULH0 1771 aa12.68□□□□□ -0.38
UBE2D3-203ENST00000343106 FRAT2O75474 233 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-203ENST00000343106 FTSJ3Q8IY81 847 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-203ENST00000343106 POGKQ9P215 609 aa12.68□□□□□ -0.38
UBE2D3-203ENST00000343106 CFAP65Q6ZU64 1925 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-203ENST00000343106 POGZQ7Z3K3 1410 aa12.68□□□□□ -0.38
UBE2D3-203ENST00000343106 ADGRB3O60242 1522 aa12.68□□□□□ -0.38
UBE2D3-203ENST00000343106 PHF23Q9BUL5 403 aaPredicted RBP12.67□□□□□ -0.38
UBE2D3-203ENST00000343106 KIAA1210Q9ULL0 1709 aa12.67□□□□□ -0.38
UBE2D3-203ENST00000343106 FBLN1P23142 703 aa12.67□□□□□ -0.38
UBE2D3-203ENST00000343106 PMFBP1Q8TBY8 1022 aa12.67□□□□□ -0.38
UBE2D3-203ENST00000343106 PDZRN3Q9UPQ7 1066 aa12.67□□□□□ -0.38
UBE2D3-203ENST00000343106 USP19O94966 1318 aa12.67□□□□□ -0.38
UBE2D3-203ENST00000343106 EXOSC9Q06265 439 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-203ENST00000343106 PRAM1Q96QH2 718 aa12.66□□□□□ -0.38
UBE2D3-203ENST00000343106 KIF1BO60333 1816 aa12.66□□□□□ -0.38
UBE2D3-203ENST00000343106 GSE1Q14687 1217 aa12.66□□□□□ -0.38
UBE2D3-203ENST00000343106 SMC4Q9NTJ3 1288 aa12.66□□□□□ -0.38
UBE2D3-203ENST00000343106 LMTK2Q8IWU2 1503 aa12.66□□□□□ -0.38
UBE2D3-203ENST00000343106 MAPK8IP3Q9UPT6 1336 aa12.66□□□□□ -0.38
UBE2D3-203ENST00000343106 NEURL4Q96JN8 1562 aa12.66□□□□□ -0.38
UBE2D3-203ENST00000343106 ANKRD36BQ8N2N9 1353 aa12.65□□□□□ -0.38
UBE2D3-203ENST00000343106 FBXO31Q5XUX0 539 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-203ENST00000343106 ADGRB1O14514 1584 aa12.65□□□□□ -0.38
UBE2D3-203ENST00000343106 CCDC27Q2M243 656 aa12.65□□□□□ -0.38
UBE2D3-203ENST00000343106 SLKQ9H2G2 1235 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-203ENST00000343106 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-203ENST00000343106 A0A1W2PP64 1363 aa12.64□□□□□ -0.39
UBE2D3-203ENST00000343106 FYB1O15117 783 aa12.64□□□□□ -0.39
UBE2D3-203ENST00000343106 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-203ENST00000343106 ZKSCAN2Q63HK3 967 aa12.64□□□□□ -0.39
UBE2D3-203ENST00000343106 DZIP1LQ8IYY4 767 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-203ENST00000343106 STAG3Q9UJ98 1225 aa12.64□□□□□ -0.39
UBE2D3-203ENST00000343106 NINLQ9Y2I6 1382 aa12.63□□□□□ -0.39
UBE2D3-203ENST00000343106 FRMPD1Q5SYB0 1578 aa12.63□□□□□ -0.39
UBE2D3-203ENST00000343106 RIPK4P57078 832 aa12.63□□□□□ -0.39
UBE2D3-203ENST00000343106 MVPQ14764 893 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-203ENST00000343106 ITPRIPQ8IWB1 547 aa12.63□□□□□ -0.39
UBE2D3-203ENST00000343106 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.63□□□□□ -0.39
UBE2D3-203ENST00000343106 MLH3Q9UHC1 1453 aa12.63□□□□□ -0.39
UBE2D3-203ENST00000343106 SPRYD3Q8NCJ5 442 aa12.63□□□□□ -0.39
UBE2D3-203ENST00000343106 CABP1Q9NZU7 370 aa12.63□□□□□ -0.39
UBE2D3-203ENST00000343106 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
UBE2D3-203ENST00000343106 SSH1Q8WYL5 1049 aa12.62□□□□□ -0.39
UBE2D3-203ENST00000343106 PLEKHF1Q96S99 279 aa12.62□□□□□ -0.39
UBE2D3-203ENST00000343106 SETBP1Q9Y6X0 1596 aa12.62□□□□□ -0.39
UBE2D3-203ENST00000343106 ABCC3O15438 1527 aa12.62□□□□□ -0.39
UBE2D3-203ENST00000343106 TERF2IPQ9NYB0 399 aa12.62□□□□□ -0.39
UBE2D3-203ENST00000343106 BRPF3Q9ULD4 1205 aa12.62□□□□□ -0.39
UBE2D3-203ENST00000343106 NOB1Q9ULX3 412 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-203ENST00000343106 TRIM27P14373 513 aa12.61□□□□□ -0.39
UBE2D3-203ENST00000343106 CDK19Q9BWU1 502 aa12.61□□□□□ -0.39
UBE2D3-203ENST00000343106 IQSEC2Q5JU85 1478 aa12.61□□□□□ -0.39
UBE2D3-203ENST00000343106 UPF2Q9HAU5 1272 aaKnown RBP12.61□□□□□ -0.39
UBE2D3-203ENST00000343106 SLC52A1Q9NWF4 448 aa12.6□□□□□ -0.39
UBE2D3-203ENST00000343106 TULP4Q9NRJ4 1543 aa12.6□□□□□ -0.39
UBE2D3-203ENST00000343106 QRICH2Q9H0J4 1663 aa12.6□□□□□ -0.39
UBE2D3-203ENST00000343106 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-203ENST00000343106 WAPLQ7Z5K2 1190 aa12.59□□□□□ -0.39
UBE2D3-203ENST00000343106 MYO3AQ8NEV4 1616 aa12.59□□□□□ -0.39
UBE2D3-203ENST00000343106 PUS7Q96PZ0 661 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-203ENST00000343106 IFT172Q9UG01 1749 aa12.59□□□□□ -0.39
UBE2D3-203ENST00000343106 BECN1Q14457 450 aa12.59□□□□□ -0.39
UBE2D3-203ENST00000343106 HDGFL2Q7Z4V5 671 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-203ENST00000343106 NSD2O96028 1365 aa12.58□□□□□ -0.4
UBE2D3-203ENST00000343106 SHPRHQ149N8 1683 aa12.58□□□□□ -0.4
UBE2D3-203ENST00000343106 YEATS2Q9ULM3 1422 aa12.58□□□□□ -0.4
UBE2D3-203ENST00000343106 HMOX1P09601 288 aa12.57□□□□□ -0.4
UBE2D3-203ENST00000343106 AAMPQ13685 434 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms