RNA–Protein interactions for RNA: ENST00000339901.8

SECISBP2-201, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SECISBP2, Length 3,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-201ENST00000339901 TULP4Q9NRJ4 1543 aa17.54■□□□□ 0.4
SECISBP2-201ENST00000339901 ZFYVE9O95405 1425 aa17.54■□□□□ 0.4
SECISBP2-201ENST00000339901 PHF23Q9BUL5 403 aaPredicted RBP17.54■□□□□ 0.4
SECISBP2-201ENST00000339901 NSD2O96028 1365 aa17.53■□□□□ 0.4
SECISBP2-201ENST00000339901 VIRMAQ69YN4 1812 aaKnown RBP17.52■□□□□ 0.4
SECISBP2-201ENST00000339901 WWC1Q8IX03 1113 aa17.52■□□□□ 0.39
SECISBP2-201ENST00000339901 TRAK1Q9UPV9 953 aa17.52■□□□□ 0.39
SECISBP2-201ENST00000339901 DEKP35659 375 aaKnown RBP17.51■□□□□ 0.39
SECISBP2-201ENST00000339901 DMRT2Q9Y5R5 561 aa17.51■□□□□ 0.39
SECISBP2-201ENST00000339901 PDE3AQ14432 1141 aa17.5■□□□□ 0.39
SECISBP2-201ENST00000339901 ANKRD36BQ8N2N9 1353 aa17.5■□□□□ 0.39
SECISBP2-201ENST00000339901 MORC1Q86VD1 984 aa17.5■□□□□ 0.39
SECISBP2-201ENST00000339901 DDRGK1Q96HY6 314 aa17.49■□□□□ 0.39
SECISBP2-201ENST00000339901 SLC12A5Q9H2X9 1139 aa17.49■□□□□ 0.39
SECISBP2-201ENST00000339901 GGT6Q6P531 493 aa17.49■□□□□ 0.39
SECISBP2-201ENST00000339901 ADGRB2O60241 1585 aa17.49■□□□□ 0.39
SECISBP2-201ENST00000339901 NBR1Q14596 966 aa17.49■□□□□ 0.39
SECISBP2-201ENST00000339901 SKAP1Q86WV1 359 aa17.49■□□□□ 0.39
SECISBP2-201ENST00000339901 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
SECISBP2-201ENST00000339901 RUNDC1Q96C34 613 aa17.49■□□□□ 0.39
SECISBP2-201ENST00000339901 BCAR3O75815 825 aa17.48■□□□□ 0.39
SECISBP2-201ENST00000339901 CCDC27Q2M243 656 aa17.48■□□□□ 0.39
SECISBP2-201ENST00000339901 NPM2Q86SE8 214 aaKnown RBP17.48■□□□□ 0.39
SECISBP2-201ENST00000339901 CGNL1Q0VF96 1302 aa17.48■□□□□ 0.39
SECISBP2-201ENST00000339901 CLTCQ00610 1675 aaKnown RBP17.48■□□□□ 0.39
SECISBP2-201ENST00000339901 CHGAP10645 457 aaKnown RBP17.48■□□□□ 0.39
SECISBP2-201ENST00000339901 VGFO15240 615 aaPredicted RBP17.47■□□□□ 0.39
SECISBP2-201ENST00000339901 ANKRD26Q9UPS8 1709 aa17.47■□□□□ 0.39
SECISBP2-201ENST00000339901 FAM161AQ3B820 660 aa17.47■□□□□ 0.39
SECISBP2-201ENST00000339901 C8orf34Q49A92 452 aa17.47■□□□□ 0.39
SECISBP2-201ENST00000339901 EVC2Q86UK5 1308 aa17.46■□□□□ 0.39
SECISBP2-201ENST00000339901 WDR63Q8IWG1 891 aa17.46■□□□□ 0.39
SECISBP2-201ENST00000339901 TMEM131LA2VDJ0 1609 aa17.46■□□□□ 0.39
SECISBP2-201ENST00000339901 PREX1Q8TCU6 1659 aa17.46■□□□□ 0.39
SECISBP2-201ENST00000339901 TMEM132EQ6IEE7 984 aa17.46■□□□□ 0.39
SECISBP2-201ENST00000339901 USP35Q9P2H5 1018 aa17.46■□□□□ 0.38
SECISBP2-201ENST00000339901 MYO5BQ9ULV0 1848 aa17.45■□□□□ 0.38
SECISBP2-201ENST00000339901 AAMPQ13685 434 aa17.44■□□□□ 0.38
SECISBP2-201ENST00000339901 MED14O60244 1454 aa17.43■□□□□ 0.38
SECISBP2-201ENST00000339901 SLC52A1Q9NWF4 448 aa17.42■□□□□ 0.38
SECISBP2-201ENST00000339901 ABCC11Q96J66 1382 aa17.42■□□□□ 0.38
SECISBP2-201ENST00000339901 PTPRMP28827 1452 aa17.42■□□□□ 0.38
SECISBP2-201ENST00000339901 TCP11L2Q8N4U5 519 aa17.41■□□□□ 0.38
SECISBP2-201ENST00000339901 PPM1GO15355 546 aaPredicted RBP17.41■□□□□ 0.38
SECISBP2-201ENST00000339901 MTHFSP49914 203 aa17.41■□□□□ 0.38
SECISBP2-201ENST00000339901 RTL5Q5HYW3 569 aaPredicted RBP17.41■□□□□ 0.38
SECISBP2-201ENST00000339901 CFAP53Q96M91 514 aa17.41■□□□□ 0.38
SECISBP2-201ENST00000339901 COL3A1P02461 1466 aaPredicted RBP17.4■□□□□ 0.38
SECISBP2-201ENST00000339901 RARSP54136 660 aaKnown RBP17.4■□□□□ 0.38
SECISBP2-201ENST00000339901 RAPGEF3O95398 923 aa17.39■□□□□ 0.38
SECISBP2-201ENST00000339901 ZMYM3Q14202 1370 aa17.39■□□□□ 0.37
SECISBP2-201ENST00000339901 IGHDP01880 384 aa17.39■□□□□ 0.37
SECISBP2-201ENST00000339901 CLUAP1Q96AJ1 413 aa17.39■□□□□ 0.37
SECISBP2-201ENST00000339901 IDI1Q13907 227 aa17.38■□□□□ 0.37
SECISBP2-201ENST00000339901 NLRP1Q9C000 1473 aa17.37■□□□□ 0.37
SECISBP2-201ENST00000339901 CD163L1Q9NR16 1453 aa17.37■□□□□ 0.37
SECISBP2-201ENST00000339901 A0A1W2PP64 1363 aa17.36■□□□□ 0.37
SECISBP2-201ENST00000339901 YEATS2Q9ULM3 1422 aa17.36■□□□□ 0.37
SECISBP2-201ENST00000339901 ATAD2Q6PL18 1390 aa17.35■□□□□ 0.37
SECISBP2-201ENST00000339901 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
SECISBP2-201ENST00000339901 REREQ9P2R6 1566 aa17.35■□□□□ 0.37
SECISBP2-201ENST00000339901 MAPK8IP3Q9UPT6 1336 aa17.35■□□□□ 0.37
SECISBP2-201ENST00000339901 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
SECISBP2-201ENST00000339901 KIF20BQ96Q89 1820 aa17.33■□□□□ 0.37
SECISBP2-201ENST00000339901 PANK1Q8TE04 598 aa17.33■□□□□ 0.37
SECISBP2-201ENST00000339901 CABP2Q9NPB3 220 aa17.33■□□□□ 0.37
SECISBP2-201ENST00000339901 ALKQ9UM73 1620 aa17.33■□□□□ 0.36
SECISBP2-201ENST00000339901 MYH16Q9H6N6 1097 aa17.33■□□□□ 0.36
SECISBP2-201ENST00000339901 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
SECISBP2-201ENST00000339901 YTHDC2Q9H6S0 1430 aaKnown RBP17.33■□□□□ 0.36
SECISBP2-201ENST00000339901 PLEKHF1Q96S99 279 aa17.32■□□□□ 0.36
SECISBP2-201ENST00000339901 COG6Q9Y2V7 657 aa17.32■□□□□ 0.36
SECISBP2-201ENST00000339901 CDC42BPGQ6DT37 1551 aa17.32■□□□□ 0.36
SECISBP2-201ENST00000339901 NEFMP07197 916 aa17.31■□□□□ 0.36
SECISBP2-201ENST00000339901 PMFBP1Q8TBY8 1022 aa17.31■□□□□ 0.36
SECISBP2-201ENST00000339901 LAS1LQ9Y4W2 734 aaKnown RBP17.31■□□□□ 0.36
SECISBP2-201ENST00000339901 RGS3P49796 1198 aa17.31■□□□□ 0.36
SECISBP2-201ENST00000339901 ARHGEF40Q8TER5 1519 aa17.31■□□□□ 0.36
SECISBP2-201ENST00000339901 DLC1Q96QB1 1528 aa17.31■□□□□ 0.36
SECISBP2-201ENST00000339901 CANXP27824 592 aaKnown RBP17.3■□□□□ 0.36
SECISBP2-201ENST00000339901 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
SECISBP2-201ENST00000339901 SETD1AO15047 1707 aaKnown RBP17.3■□□□□ 0.36
SECISBP2-201ENST00000339901 PNPLA6Q8IY17 1366 aa17.3■□□□□ 0.36
SECISBP2-201ENST00000339901 NEUROD2Q15784 382 aa17.29■□□□□ 0.36
SECISBP2-201ENST00000339901 USP19O94966 1318 aa17.29■□□□□ 0.36
SECISBP2-201ENST00000339901 AGLP35573 1532 aa17.29■□□□□ 0.36
SECISBP2-201ENST00000339901 RLBP1P12271 317 aa17.29■□□□□ 0.36
SECISBP2-201ENST00000339901 IL16Q14005 1332 aa17.28■□□□□ 0.36
SECISBP2-201ENST00000339901 U2AF1L5P0DN76 240 aaPredicted RBP17.28■□□□□ 0.36
SECISBP2-201ENST00000339901 U2AF1Q01081 240 aaKnown RBP eCLIP17.28■□□□□ 0.36
SECISBP2-201ENST00000339901 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.35
SECISBP2-201ENST00000339901 FYB1O15117 783 aa17.26■□□□□ 0.35
SECISBP2-201ENST00000339901 FRAT1Q92837 279 aaPredicted RBP17.26■□□□□ 0.35
SECISBP2-201ENST00000339901 PCDHB15Q9Y5E8 787 aa17.26■□□□□ 0.35
SECISBP2-201ENST00000339901 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
SECISBP2-201ENST00000339901 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
SECISBP2-201ENST00000339901 SPATA31D1Q6ZQQ2 1576 aa17.25■□□□□ 0.35
SECISBP2-201ENST00000339901 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
SECISBP2-201ENST00000339901 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
SECISBP2-201ENST00000339901 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms