RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 FMNL3Q8IVF7 1028 aa15.17■□□□□ 0.02
BRPF3-201ENST00000339717 FOXD4L4Q8WXT5 416 aaPredicted RBP15.17■□□□□ 0.02
BRPF3-201ENST00000339717 SHTN1A0MZ66 631 aa15.17■□□□□ 0.02
BRPF3-201ENST00000339717 NPHP1O15259 732 aa15.17■□□□□ 0.02
BRPF3-201ENST00000339717 PRPF40AO75400 957 aaKnown RBP15.17■□□□□ 0.02
BRPF3-201ENST00000339717 IGSF3O75054 1194 aa15.16■□□□□ 0.02
BRPF3-201ENST00000339717 GBP6Q6ZN66 633 aa15.16■□□□□ 0.02
BRPF3-201ENST00000339717 MYRIPQ8NFW9 859 aa15.16■□□□□ 0.02
BRPF3-201ENST00000339717 STAG3Q9UJ98 1225 aa15.16■□□□□ 0.02
BRPF3-201ENST00000339717 DRC1Q96MC2 740 aa15.15■□□□□ 0.02
BRPF3-201ENST00000339717 CWC22Q9HCG8 908 aaKnown RBP15.15■□□□□ 0.02
BRPF3-201ENST00000339717 TRIM5Q9C035 493 aa15.15■□□□□ 0.02
BRPF3-201ENST00000339717 V9GYY5 206 aaPredicted RBP15.15■□□□□ 0.02
BRPF3-201ENST00000339717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.027e-7■□□□□ 9.8
BRPF3-201ENST00000339717 NOL7Q9UMY1 257 aaKnown RBP15.15■□□□□ 0.02
BRPF3-201ENST00000339717 MYBBP1AQ9BQG0 1328 aaKnown RBP15.14■□□□□ 0.01
BRPF3-201ENST00000339717 A0A1B0GUA9 196 aa15.14■□□□□ 0.01
BRPF3-201ENST00000339717 POLR3GO15318 223 aaPredicted RBP15.14■□□□□ 0.01
BRPF3-201ENST00000339717 VGFO15240 615 aaPredicted RBP15.14■□□□□ 0.01
BRPF3-201ENST00000339717 ZBTB12Q9Y330 459 aaPredicted RBP15.14■□□□□ 0.01
BRPF3-201ENST00000339717 AKNAQ7Z591 1439 aa15.14■□□□□ 0.01
BRPF3-201ENST00000339717 VPS8Q8N3P4 1428 aa15.14■□□□□ 0.01
BRPF3-201ENST00000339717 AP1ARQ63HQ0 302 aa15.14■□□□□ 0.01
BRPF3-201ENST00000339717 RPAINQ86UA6 219 aa15.14■□□□□ 0.01
BRPF3-201ENST00000339717 NOLC1Q14978 699 aaKnown RBP eCLIP15.13■□□□□ 0.01
BRPF3-201ENST00000339717 CENPHQ9H3R5 247 aa15.13■□□□□ 0.01
BRPF3-201ENST00000339717 MICALCLQ6ZW33 695 aa15.13■□□□□ 0.01
BRPF3-201ENST00000339717 CEP120Q8N960 986 aa15.13■□□□□ 0.01
BRPF3-201ENST00000339717 ZRSR2Q15696 482 aaKnown RBP15.13■□□□□ 0.01
BRPF3-201ENST00000339717 ZNF397Q8NF99 534 aaPredicted RBP15.13■□□□□ 0.01
BRPF3-201ENST00000339717 CCDC34Q96HJ3 373 aa15.13■□□□□ 0.01
BRPF3-201ENST00000339717 KIF18AQ8NI77 898 aa15.13■□□□□ 0.01
BRPF3-201ENST00000339717 GBP3Q9H0R5 595 aa15.13■□□□□ 0.01
BRPF3-201ENST00000339717 PPM1EQ8WY54 764 aa15.12■□□□□ 0.01
BRPF3-201ENST00000339717 ZNF853P0CG23 659 aa15.12■□□□□ 0.01
BRPF3-201ENST00000339717 LMAN1P49257 510 aa15.12■□□□□ 0.01
BRPF3-201ENST00000339717 KIF15Q9NS87 1388 aa15.12■□□□□ 0.01
BRPF3-201ENST00000339717 CT47B1P0C2W7 299 aaPredicted RBP15.11■□□□□ 0.01
BRPF3-201ENST00000339717 KIF1CO43896 1103 aaKnown RBP15.11■□□□□ 0.01
BRPF3-201ENST00000339717 TICAM2Q86XR7 235 aa15.11■□□□□ 0.01
BRPF3-201ENST00000339717 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
BRPF3-201ENST00000339717 PTPN14Q15678 1187 aa15.1■□□□□ 0.01
BRPF3-201ENST00000339717 UVSSAQ2YD98 709 aa15.1■□□□□ 0.01
BRPF3-201ENST00000339717 ITPRIPQ8IWB1 547 aa15.1■□□□□ 0.01
BRPF3-201ENST00000339717 SPC24Q8NBT2 197 aa15.1■□□□□ 0.01
BRPF3-201ENST00000339717 ERCC6Q03468 1493 aa15.1■□□□□ 0.01
BRPF3-201ENST00000339717 KLHL40Q2TBA0 621 aa15.09■□□□□ 0.01
BRPF3-201ENST00000339717 KDM2AQ9Y2K7 1162 aa15.09■□□□□ 0.01
BRPF3-201ENST00000339717 GORABQ5T7V8 394 aa15.09■□□□□ 0.01
BRPF3-201ENST00000339717 GBP2P32456 591 aaPredicted RBP15.09■□□□□ 0.01
BRPF3-201ENST00000339717 CNTLNQ9NXG0 1405 aa15.09■□□□□ 0.01
BRPF3-201ENST00000339717 PLEKHD1A6NEE1 506 aa15.09■□□□□ 0.01
BRPF3-201ENST00000339717 NEUROD2Q15784 382 aa15.09■□□□□ 0.01
BRPF3-201ENST00000339717 TMX4Q9H1E5 349 aaPredicted RBP15.09■□□□□ 0.01
BRPF3-201ENST00000339717 LRRFIP2Q9Y608 721 aaKnown RBP15.08■□□□□ 0
BRPF3-201ENST00000339717 CECR2Q9BXF3 1484 aa15.08■□□□□ 0
BRPF3-201ENST00000339717 REC8O95072 547 aa15.08■□□□□ 0
BRPF3-201ENST00000339717 CCDC192P0DO97 292 aa15.08■□□□□ 0
BRPF3-201ENST00000339717 EZRP15311 586 aaKnown RBP15.08■□□□□ 0
BRPF3-201ENST00000339717 K7ELQ4 463 aaPredicted RBP15.07■□□□□ 0
BRPF3-201ENST00000339717 CCDC102AQ96A19 550 aa15.07■□□□□ 0
BRPF3-201ENST00000339717 RTF1Q92541 710 aaKnown RBP15.06■□□□□ 0
BRPF3-201ENST00000339717 LUZP1Q86V48 1076 aa15.06■□□□□ 0
BRPF3-201ENST00000339717 MICALL1Q8N3F8 863 aa15.06■□□□□ 0
BRPF3-201ENST00000339717 NAT10Q9H0A0 1025 aaKnown RBP15.06■□□□□ 0
BRPF3-201ENST00000339717 CLUAP1Q96AJ1 413 aa15.05■□□□□ 0
BRPF3-201ENST00000339717 RRP7BPQ9NSQ0 103 aa15.05■□□□□ 0
BRPF3-201ENST00000339717 SKIDA1Q1XH10 827 aa15.05■□□□□ 0
BRPF3-201ENST00000339717 YY1AP1Q9H869 796 aa15.05■□□□□ 0
BRPF3-201ENST00000339717 TERF2IPQ9NYB0 399 aa15.05■□□□□ 0
BRPF3-201ENST00000339717 CEP83Q9Y592 693 aa15.05■□□□□ 0
BRPF3-201ENST00000339717 ZNF500O60304 480 aaPredicted RBP15.05■□□□□ -0
BRPF3-201ENST00000339717 NEMFO60524 1076 aa15.05■□□□□ -0
BRPF3-201ENST00000339717 KRBA2Q6ZNG9 492 aa15.04■□□□□ -0
BRPF3-201ENST00000339717 TMX1Q9H3N1 280 aa15.04■□□□□ -0
BRPF3-201ENST00000339717 CCDC172P0C7W6 258 aa15.04■□□□□ -0
BRPF3-201ENST00000339717 NGEFQ8N5V2 710 aa15.04■□□□□ -0
BRPF3-201ENST00000339717 SYCE3A1L190 88 aa15.03■□□□□ -0
BRPF3-201ENST00000339717 ENOX2Q16206 610 aaKnown RBP15.03■□□□□ -0
BRPF3-201ENST00000339717 U2AF2P26368 475 aaKnown RBP eCLIP15.03■□□□□ -0
BRPF3-201ENST00000339717 CASQ1P31415 396 aa15.03■□□□□ -0
BRPF3-201ENST00000339717 RBBP5Q15291 538 aaKnown RBP15.03■□□□□ -0
BRPF3-201ENST00000339717 TBC1D2Q9BYX2 928 aa15.03■□□□□ -0
BRPF3-201ENST00000339717 GEMIN8Q9NWZ8 242 aaKnown RBP15.03■□□□□ -0
BRPF3-201ENST00000339717 ICE2Q659A1 982 aa15.03■□□□□ -0
BRPF3-201ENST00000339717 MCM2P49736 904 aa15.03■□□□□ -0
BRPF3-201ENST00000339717 MPNDQ8N594 471 aa15.03■□□□□ -0
BRPF3-201ENST00000339717 TNPO1Q92973 898 aaKnown RBP15.03■□□□□ -0
BRPF3-201ENST00000339717 ANKRD18AQ8IVF6 992 aa15.02■□□□□ -0
BRPF3-201ENST00000339717 LRRCC1Q9C099 1032 aa15.02■□□□□ -0
BRPF3-201ENST00000339717 FHAD1B1AJZ9 1412 aa15.02■□□□□ -0
BRPF3-201ENST00000339717 SMC2O95347 1197 aa15.02□□□□□ -0.01
BRPF3-201ENST00000339717 TSR1Q2NL82 804 aaKnown RBP15.02□□□□□ -0.01
BRPF3-201ENST00000339717 SWAP70Q9UH65 585 aa15.02□□□□□ -0.01
BRPF3-201ENST00000339717 ERC1Q8IUD2 1116 aa15.02□□□□□ -0.01
BRPF3-201ENST00000339717 POTEB2H3BUK9 544 aa15.01□□□□□ -0.01
BRPF3-201ENST00000339717 NEBLO76041 1014 aa15.01□□□□□ -0.01
BRPF3-201ENST00000339717 SMTNL1A8MU46 457 aa15.01□□□□□ -0.01
BRPF3-201ENST00000339717 NUTM1Q86Y26 1132 aa15.01□□□□□ -0.01
BRPF3-201ENST00000339717 FOXD4L6Q3SYB3 417 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms