RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 BRPF3Q9ULD4 1205 aa6.88□□□□□ -1.31
MSL1-201ENST00000339569 TECPR2O15040 1411 aa6.88□□□□□ -1.31
MSL1-201ENST00000339569 PIK3C2GO75747 1445 aa6.88□□□□□ -1.31
MSL1-201ENST00000339569 ZC3H15Q8WU90 426 aaKnown RBP6.88□□□□□ -1.31
MSL1-201ENST00000339569 NWD1Q149M9 1564 aa6.87□□□□□ -1.31
MSL1-201ENST00000339569 SPDYE4A6NLX3 237 aa6.87□□□□□ -1.31
MSL1-201ENST00000339569 FAM50AQ14320 339 aaKnown RBP6.87□□□□□ -1.31
MSL1-201ENST00000339569 BCL11BQ9C0K0 894 aaPredicted RBP6.87□□□□□ -1.31
MSL1-201ENST00000339569 MED14O60244 1454 aa6.87□□□□□ -1.31
MSL1-201ENST00000339569 TOPAZ1Q8N9V7 1692 aa6.87□□□□□ -1.31
MSL1-201ENST00000339569 CCDC144AA2RUR9 1427 aa6.87□□□□□ -1.31
MSL1-201ENST00000339569 PROM2Q8N271 834 aa6.86□□□□□ -1.31
MSL1-201ENST00000339569 NPC1L1Q9UHC9 1359 aa6.86□□□□□ -1.31
MSL1-201ENST00000339569 SIRT1Q96EB6 747 aa6.86□□□□□ -1.31
MSL1-201ENST00000339569 MYO5BQ9ULV0 1848 aa6.86□□□□□ -1.31
MSL1-201ENST00000339569 XRN1Q8IZH2 1706 aaKnown RBP6.86□□□□□ -1.31
MSL1-201ENST00000339569 KCNV2Q8TDN2 545 aa6.86□□□□□ -1.31
MSL1-201ENST00000339569 TSPOAP1O95153 1857 aa6.86□□□□□ -1.31
MSL1-201ENST00000339569 COL17A1Q9UMD9 1497 aaPredicted RBP6.85□□□□□ -1.31
MSL1-201ENST00000339569 FAM177A1Q8N128 213 aaPredicted RBP6.85□□□□□ -1.31
MSL1-201ENST00000339569 WASHC2AQ641Q2 1341 aa6.85□□□□□ -1.31
MSL1-201ENST00000339569 WASHC2CQ9Y4E1 1318 aa6.85□□□□□ -1.31
MSL1-201ENST00000339569 USP35Q9P2H5 1018 aa6.84□□□□□ -1.31
MSL1-201ENST00000339569 QRICH2Q9H0J4 1663 aa6.84□□□□□ -1.31
MSL1-201ENST00000339569 CCER1Q8TC90 406 aaPredicted RBP6.84□□□□□ -1.31
MSL1-201ENST00000339569 SCAF11Q99590 1463 aaKnown RBP6.84□□□□□ -1.31
MSL1-201ENST00000339569 HNRNPMP52272 730 aaKnown RBP eCLIP6.83□□□□□ -1.32
MSL1-201ENST00000339569 TMED8Q6PL24 325 aaPredicted RBP6.83□□□□□ -1.32
MSL1-201ENST00000339569 TONSLQ96HA7 1378 aa6.83□□□□□ -1.32
MSL1-201ENST00000339569 NINLQ9Y2I6 1382 aa6.83□□□□□ -1.32
MSL1-201ENST00000339569 CWC22Q9HCG8 908 aaKnown RBP6.83□□□□□ -1.32
MSL1-201ENST00000339569 SLC52A1Q9NWF4 448 aa6.83□□□□□ -1.32
MSL1-201ENST00000339569 AKAP12Q02952 1782 aa6.82□□□□□ -1.32
MSL1-201ENST00000339569 ITSN1Q15811 1721 aa6.82□□□□□ -1.32
MSL1-201ENST00000339569 MFAP1P55081 439 aaKnown RBP6.82□□□□□ -1.32
MSL1-201ENST00000339569 PPARGC1BQ86YN6 1023 aaKnown RBP6.82□□□□□ -1.32
MSL1-201ENST00000339569 YEATS2Q9ULM3 1422 aa6.82□□□□□ -1.32
MSL1-201ENST00000339569 ZNF316A6NFI3 1004 aaPredicted RBP6.82□□□□□ -1.32
MSL1-201ENST00000339569 PIK3R4Q99570 1358 aa6.82□□□□□ -1.32
MSL1-201ENST00000339569 GTPBP6O43824 516 aaPredicted RBP6.82□□□□□ -1.32
MSL1-201ENST00000339569 RNF25Q96BH1 459 aaPredicted RBP6.82□□□□□ -1.32
MSL1-201ENST00000339569 A2ML1A8K2U0 1454 aa6.81□□□□□ -1.32
MSL1-201ENST00000339569 FAM135BQ49AJ0 1406 aa6.81□□□□□ -1.32
MSL1-201ENST00000339569 ASXL1Q8IXJ9 1541 aa6.81□□□□□ -1.32
MSL1-201ENST00000339569 ZFP91Q96JP5 570 aaPredicted RBP6.81□□□□□ -1.32
MSL1-201ENST00000339569 CLUAP1Q96AJ1 413 aa6.8□□□□□ -1.32
MSL1-201ENST00000339569 ATP1B4Q9UN42 357 aaPredicted RBP6.8□□□□□ -1.32
MSL1-201ENST00000339569 PHRF1Q9P1Y6 1649 aaKnown RBP6.8□□□□□ -1.32
MSL1-201ENST00000339569 MON2Q7Z3U7 1717 aa6.8□□□□□ -1.32
MSL1-201ENST00000339569 CDC42BPGQ6DT37 1551 aa6.8□□□□□ -1.32
MSL1-201ENST00000339569 CAPN15O75808 1086 aa6.8□□□□□ -1.32
MSL1-201ENST00000339569 HNRNPUL2Q1KMD3 747 aaKnown RBP6.8□□□□□ -1.32
MSL1-201ENST00000339569 CHD2O14647 1828 aaKnown RBP6.8□□□□□ -1.32
MSL1-201ENST00000339569 MST1RQ04912 1400 aa6.8□□□□□ -1.32
MSL1-201ENST00000339569 MKRN4PQ13434 485 aaPredicted RBP6.8□□□□□ -1.32
MSL1-201ENST00000339569 GZF1Q9H116 711 aaPredicted RBP6.8□□□□□ -1.32
MSL1-201ENST00000339569 ALKQ9UM73 1620 aa6.8□□□□□ -1.32
MSL1-201ENST00000339569 NCOA3Q9Y6Q9 1424 aa6.79□□□□□ -1.32
MSL1-201ENST00000339569 NRKQ7Z2Y5 1582 aa6.79□□□□□ -1.32
MSL1-201ENST00000339569 IRF5Q13568 498 aa6.79□□□□□ -1.32
MSL1-201ENST00000339569 CCDC136Q96JN2 1154 aa6.79□□□□□ -1.32
MSL1-201ENST00000339569 BRD4O60885 1362 aaPredicted RBP6.78□□□□□ -1.32
MSL1-201ENST00000339569 TAF7LQ5H9L4 462 aa6.78□□□□□ -1.32
MSL1-201ENST00000339569 NALCNQ8IZF0 1738 aa6.78□□□□□ -1.32
MSL1-201ENST00000339569 SETD1BQ9UPS6 1966 aaKnown RBP6.78□□□□□ -1.32
MSL1-201ENST00000339569 EIF3AQ14152 1382 aaKnown RBP6.78□□□□□ -1.32
MSL1-201ENST00000339569 CEP170BQ9Y4F5 1589 aaPredicted RBP6.78□□□□□ -1.32
MSL1-201ENST00000339569 ILDR2Q71H61 639 aa6.78□□□□□ -1.32
MSL1-201ENST00000339569 PTCH1Q13635 1447 aa6.77□□□□□ -1.32
MSL1-201ENST00000339569 ABCC6O95255 1503 aa6.77□□□□□ -1.33
MSL1-201ENST00000339569 KIF20BQ96Q89 1820 aa6.76□□□□□ -1.33
MSL1-201ENST00000339569 CCER2I3L3R5 266 aa6.76□□□□□ -1.33
MSL1-201ENST00000339569 RRP7BPQ9NSQ0 103 aa6.76□□□□□ -1.33
MSL1-201ENST00000339569 PLEKHG2Q9H7P9 1386 aa6.76□□□□□ -1.33
MSL1-201ENST00000339569 PTPRMP28827 1452 aa6.76□□□□□ -1.33
MSL1-201ENST00000339569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.76□□□□□ -1.33
MSL1-201ENST00000339569 HS6ST3Q8IZP7 471 aa6.75□□□□□ -1.33
MSL1-201ENST00000339569 PLEKHG1Q9ULL1 1385 aa6.75□□□□□ -1.33
MSL1-201ENST00000339569 TMCO4Q5TGY1 634 aa6.75□□□□□ -1.33
MSL1-201ENST00000339569 FMN2Q9NZ56 1722 aa6.75□□□□□ -1.33
MSL1-201ENST00000339569 AFAP1Q8N556 730 aa6.75□□□□□ -1.33
MSL1-201ENST00000339569 CCDC7Q96M83 1385 aa6.74□□□□□ -1.33
MSL1-201ENST00000339569 HMGB1P09429 215 aaKnown RBP6.73□□□□□ -1.33
MSL1-201ENST00000339569 FAM69CQ0P6D2 419 aa6.73□□□□□ -1.33
MSL1-201ENST00000339569 SPOCK2Q92563 424 aa6.73□□□□□ -1.33
MSL1-201ENST00000339569 KIF1AQ12756 1690 aa6.73□□□□□ -1.33
MSL1-201ENST00000339569 NSD2O96028 1365 aa6.73□□□□□ -1.33
MSL1-201ENST00000339569 CADPS2Q86UW7 1296 aa6.73□□□□□ -1.33
MSL1-201ENST00000339569 ZNF592Q92610 1267 aa6.73□□□□□ -1.33
MSL1-201ENST00000339569 ATP7BP35670 1465 aa6.73□□□□□ -1.33
MSL1-201ENST00000339569 ABCC11Q96J66 1382 aa6.73□□□□□ -1.33
MSL1-201ENST00000339569 L3MBTL2Q969R5 705 aa6.73□□□□□ -1.33
MSL1-201ENST00000339569 CERS3Q8IU89 383 aa6.72□□□□□ -1.33
MSL1-201ENST00000339569 C14orf93Q9H972 538 aaKnown RBP6.72□□□□□ -1.33
MSL1-201ENST00000339569 RETREG2Q8NC44 543 aa6.72□□□□□ -1.33
MSL1-201ENST00000339569 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.72□□□□□ -1.33
MSL1-201ENST00000339569 POLA2Q14181 598 aa6.72□□□□□ -1.33
MSL1-201ENST00000339569 MED1Q15648 1581 aaPredicted RBP6.71□□□□□ -1.33
MSL1-201ENST00000339569 LRPPRCP42704 1394 aaKnown RBP6.71□□□□□ -1.33
MSL1-201ENST00000339569 A0A0U1RQG5 324 aaPredicted RBP6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms