RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 ROCK2O75116 1388 aaKnown RBP18.41■□□□□ 0.54
SRSF3-201ENST00000339436 GPRASP1Q5JY77 1395 aa18.41■□□□□ 0.54
SRSF3-201ENST00000339436 QRICH2Q9H0J4 1663 aa18.41■□□□□ 0.54
SRSF3-201ENST00000339436 WAPLQ7Z5K2 1190 aa18.41■□□□□ 0.54
SRSF3-201ENST00000339436 TIMELESSQ9UNS1 1208 aa18.41■□□□□ 0.54
SRSF3-201ENST00000339436 TRAK1Q9UPV9 953 aa18.4■□□□□ 0.54
SRSF3-201ENST00000339436 CADPS2Q86UW7 1296 aa18.39■□□□□ 0.54
SRSF3-201ENST00000339436 PRAM1Q96QH2 718 aa18.39■□□□□ 0.54
SRSF3-201ENST00000339436 MST1RQ04912 1400 aa18.39■□□□□ 0.53
SRSF3-201ENST00000339436 ATF3P18847 181 aa18.39■□□□□ 0.53
SRSF3-201ENST00000339436 ILDR1Q86SU0 546 aaPredicted RBP18.38■□□□□ 0.53
SRSF3-201ENST00000339436 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
SRSF3-201ENST00000339436 PIP4K2BP78356 416 aa18.36■□□□□ 0.53
SRSF3-201ENST00000339436 POGKQ9P215 609 aa18.35■□□□□ 0.53
SRSF3-201ENST00000339436 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
SRSF3-201ENST00000339436 SAFB2Q14151 953 aaKnown RBP eCLIP18.33■□□□□ 0.53
SRSF3-201ENST00000339436 NHSL1Q5SYE7 1610 aa18.33■□□□□ 0.53
SRSF3-201ENST00000339436 USP32Q8NFA0 1604 aa18.33■□□□□ 0.53
SRSF3-201ENST00000339436 SLAIN2Q9P270 581 aa18.33■□□□□ 0.53
SRSF3-201ENST00000339436 C1orf167Q5SNV9 1468 aa18.33■□□□□ 0.52
SRSF3-201ENST00000339436 EIF3AQ14152 1382 aaKnown RBP18.32■□□□□ 0.52
SRSF3-201ENST00000339436 PHLPP1O60346 1717 aa18.32■□□□□ 0.52
SRSF3-201ENST00000339436 AHDC1Q5TGY3 1603 aaPredicted RBP18.32■□□□□ 0.52
SRSF3-201ENST00000339436 ITSN1Q15811 1721 aa18.31■□□□□ 0.52
SRSF3-201ENST00000339436 KIF1AQ12756 1690 aa18.3■□□□□ 0.52
SRSF3-201ENST00000339436 CENPJQ9HC77 1338 aaPredicted RBP18.29■□□□□ 0.52
SRSF3-201ENST00000339436 CARD11Q9BXL7 1154 aa18.29■□□□□ 0.52
SRSF3-201ENST00000339436 TULP4Q9NRJ4 1543 aa18.29■□□□□ 0.52
SRSF3-201ENST00000339436 MINK1Q8N4C8 1332 aaPredicted RBP18.29■□□□□ 0.52
SRSF3-201ENST00000339436 TOPAZ1Q8N9V7 1692 aa18.28■□□□□ 0.52
SRSF3-201ENST00000339436 COL16A1Q07092 1604 aaPredicted RBP18.28■□□□□ 0.52
SRSF3-201ENST00000339436 HIRIP3Q9BW71 556 aaPredicted RBP18.27■□□□□ 0.51
SRSF3-201ENST00000339436 ANKARQ7Z5J8 1434 aa18.27■□□□□ 0.51
SRSF3-201ENST00000339436 BRINP3Q76B58 766 aa18.26■□□□□ 0.51
SRSF3-201ENST00000339436 ATP7BP35670 1465 aa18.25■□□□□ 0.51
SRSF3-201ENST00000339436 HSPA1LP34931 641 aa18.24■□□□□ 0.51
SRSF3-201ENST00000339436 SBNO2Q9Y2G9 1366 aa18.24■□□□□ 0.51
SRSF3-201ENST00000339436 WASLO00401 505 aaPredicted RBP18.23■□□□□ 0.51
SRSF3-201ENST00000339436 USP47Q96K76 1375 aa18.22■□□□□ 0.51
SRSF3-201ENST00000339436 NUTM2FA1L443 756 aa18.22■□□□□ 0.51
SRSF3-201ENST00000339436 ORAI2Q96SN7 254 aa18.21■□□□□ 0.51
SRSF3-201ENST00000339436 PRR36Q9H6K5 1346 aa18.2■□□□□ 0.5
SRSF3-201ENST00000339436 SHPRHQ149N8 1683 aa18.19■□□□□ 0.5
SRSF3-201ENST00000339436 ESCO1Q5FWF5 840 aa18.18■□□□□ 0.5
SRSF3-201ENST00000339436 PXDNQ92626 1479 aa18.18■□□□□ 0.5
SRSF3-201ENST00000339436 CDK19Q9BWU1 502 aa18.17■□□□□ 0.5
SRSF3-201ENST00000339436 TRPM3Q9HCF6 1732 aaPredicted RBP18.16■□□□□ 0.5
SRSF3-201ENST00000339436 NPHP3Q7Z494 1330 aa18.15■□□□□ 0.5
SRSF3-201ENST00000339436 EVC2Q86UK5 1308 aa18.15■□□□□ 0.5
SRSF3-201ENST00000339436 DDX17Q92841 729 aaKnown RBP18.14■□□□□ 0.49
SRSF3-201ENST00000339436 PHF8Q9UPP1 1060 aa18.14■□□□□ 0.49
SRSF3-201ENST00000339436 ST20-MTHFSA0A0A6YYL1 179 aa18.13■□□□□ 0.49
SRSF3-201ENST00000339436 SRPK2P78362 688 aaKnown RBP18.13■□□□□ 0.49
SRSF3-201ENST00000339436 NUDT16Q96DE0 195 aaKnown RBP18.13■□□□□ 0.49
SRSF3-201ENST00000339436 TESK2Q96S53 571 aa18.13■□□□□ 0.49
SRSF3-201ENST00000339436 AKAP12Q02952 1782 aa18.13■□□□□ 0.49
SRSF3-201ENST00000339436 SOS2Q07890 1332 aaPredicted RBP18.13■□□□□ 0.49
SRSF3-201ENST00000339436 CABP2Q9NPB3 220 aa18.12■□□□□ 0.49
SRSF3-201ENST00000339436 COL22A1Q8NFW1 1626 aaPredicted RBP18.11■□□□□ 0.49
SRSF3-201ENST00000339436 PPIP5K1Q6PFW1 1433 aa18.11■□□□□ 0.49
SRSF3-201ENST00000339436 FOXO3O43524 673 aa18.11■□□□□ 0.49
SRSF3-201ENST00000339436 JCADQ9P266 1359 aa18.1■□□□□ 0.49
SRSF3-201ENST00000339436 CCDC61Q9Y6R9 512 aa18.1■□□□□ 0.49
SRSF3-201ENST00000339436 ALS2Q96Q42 1657 aa18.1■□□□□ 0.49
SRSF3-201ENST00000339436 ATAD2Q6PL18 1390 aa18.09■□□□□ 0.49
SRSF3-201ENST00000339436 POLR3AO14802 1390 aaPredicted RBP18.09■□□□□ 0.49
SRSF3-201ENST00000339436 MED1Q15648 1581 aaPredicted RBP18.08■□□□□ 0.49
SRSF3-201ENST00000339436 PMFBP1Q8TBY8 1022 aa18.08■□□□□ 0.49
SRSF3-201ENST00000339436 MON2Q7Z3U7 1717 aa18.08■□□□□ 0.49
SRSF3-201ENST00000339436 ABCA3Q99758 1704 aa18.08■□□□□ 0.48
SRSF3-201ENST00000339436 DISP3Q9P2K9 1392 aa18.07■□□□□ 0.48
SRSF3-201ENST00000339436 XPCQ01831 940 aaPredicted RBP18.07■□□□□ 0.48
SRSF3-201ENST00000339436 PNPLA6Q8IY17 1366 aa18.06■□□□□ 0.48
SRSF3-201ENST00000339436 MYOM1P52179 1685 aa18.06■□□□□ 0.48
SRSF3-201ENST00000339436 SLC24A1O60721 1099 aa18.06■□□□□ 0.48
SRSF3-201ENST00000339436 LRRC59Q96AG4 307 aaKnown RBP18.06■□□□□ 0.48
SRSF3-201ENST00000339436 TNS3Q68CZ2 1445 aa18.06■□□□□ 0.48
SRSF3-201ENST00000339436 NRKQ7Z2Y5 1582 aa18.06■□□□□ 0.48
SRSF3-201ENST00000339436 PLEKHG3A1L390 1219 aa18.05■□□□□ 0.48
SRSF3-201ENST00000339436 EIF4G2P78344 907 aaKnown RBP eCLIP18.05■□□□□ 0.48
SRSF3-201ENST00000339436 SBNO1A3KN83 1393 aa18.05■□□□□ 0.48
SRSF3-201ENST00000339436 NGDNQ8NEJ9 315 aaKnown RBP18.04■□□□□ 0.48
SRSF3-201ENST00000339436 CRYBG1Q9Y4K1 1723 aa18.04■□□□□ 0.48
SRSF3-201ENST00000339436 KRT28Q7Z3Y7 464 aa18.03■□□□□ 0.48
SRSF3-201ENST00000339436 MARF1Q9Y4F3 1742 aaKnown RBP18.03■□□□□ 0.48
SRSF3-201ENST00000339436 ACEP12821 1306 aa18.03■□□□□ 0.48
SRSF3-201ENST00000339436 LRP6O75581 1613 aa18.03■□□□□ 0.48
SRSF3-201ENST00000339436 HSPA5P11021 654 aaKnown RBP18.03■□□□□ 0.48
SRSF3-201ENST00000339436 TMF1P82094 1093 aa18.03■□□□□ 0.48
SRSF3-201ENST00000339436 PUS7Q96PZ0 661 aaKnown RBP18.03■□□□□ 0.48
SRSF3-201ENST00000339436 SPATA31A3Q5VYP0 1347 aa18.02■□□□□ 0.48
SRSF3-201ENST00000339436 PSME1Q06323 249 aa18.02■□□□□ 0.47
SRSF3-201ENST00000339436 CABP1Q9NZU7 370 aa18.02■□□□□ 0.47
SRSF3-201ENST00000339436 SPATA31A6Q5VVP1 1343 aa18.01■□□□□ 0.47
SRSF3-201ENST00000339436 CD163L1Q9NR16 1453 aa18.01■□□□□ 0.47
SRSF3-201ENST00000339436 NINLQ9Y2I6 1382 aa18.01■□□□□ 0.47
SRSF3-201ENST00000339436 USP6P35125 1406 aa18.01■□□□□ 0.47
SRSF3-201ENST00000339436 CPSF1Q10570 1443 aaKnown RBP18■□□□□ 0.47
SRSF3-201ENST00000339436 ARHGEF10O15013 1369 aa17.99■□□□□ 0.47
SRSF3-201ENST00000339436 PIK3C2AO00443 1686 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms