RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 RXRBP28702 533 aa28.71■■■□□ 2.19
ITGA4-202ENST00000339307 ADAMTS2O95450 1211 aa28.7■■■□□ 2.19
ITGA4-202ENST00000339307 RAB3GAP2Q9H2M9 1393 aa28.7■■■□□ 2.18
ITGA4-202ENST00000339307 IFT172Q9UG01 1749 aa28.7■■■□□ 2.18
ITGA4-202ENST00000339307 LRPPRCP42704 1394 aaKnown RBP28.68■■■□□ 2.18
ITGA4-202ENST00000339307 SOS2Q07890 1332 aaPredicted RBP28.66■■■□□ 2.18
ITGA4-202ENST00000339307 PIK3C2GO75747 1445 aa28.66■■■□□ 2.18
ITGA4-202ENST00000339307 NGLY1Q96IV0 654 aa28.65■■■□□ 2.18
ITGA4-202ENST00000339307 ABCC11Q96J66 1382 aa28.64■■■□□ 2.18
ITGA4-202ENST00000339307 PLEKHH1Q9ULM0 1364 aa28.63■■■□□ 2.17
ITGA4-202ENST00000339307 XPCQ01831 940 aaPredicted RBP28.63■■■□□ 2.17
ITGA4-202ENST00000339307 CDC42BPGQ6DT37 1551 aa28.62■■■□□ 2.17
ITGA4-202ENST00000339307 FOXO3O43524 673 aa28.62■■■□□ 2.17
ITGA4-202ENST00000339307 CFAP70Q5T0N1 1121 aa28.62■■■□□ 2.17
ITGA4-202ENST00000339307 YTHDC2Q9H6S0 1430 aaKnown RBP28.62■■■□□ 2.17
ITGA4-202ENST00000339307 NPHP3Q7Z494 1330 aa28.62■■■□□ 2.17
ITGA4-202ENST00000339307 QTRT2Q9H974 415 aaKnown RBP28.61■■■□□ 2.17
ITGA4-202ENST00000339307 C14orf93Q9H972 538 aaKnown RBP28.6■■■□□ 2.17
ITGA4-202ENST00000339307 TECPR2O15040 1411 aa28.6■■■□□ 2.17
ITGA4-202ENST00000339307 LAMC1P11047 1609 aa28.59■■■□□ 2.17
ITGA4-202ENST00000339307 DHX57Q6P158 1386 aaKnown RBP28.58■■■□□ 2.17
ITGA4-202ENST00000339307 SAFB2Q14151 953 aaKnown RBP eCLIP28.57■■■□□ 2.16
ITGA4-202ENST00000339307 KNDC1Q76NI1 1749 aa28.56■■■□□ 2.16
ITGA4-202ENST00000339307 KDM2AQ9Y2K7 1162 aa28.55■■■□□ 2.16
ITGA4-202ENST00000339307 RBM6P78332 1123 aaKnown RBP28.53■■■□□ 2.16
ITGA4-202ENST00000339307 USP21Q9UK80 565 aa28.53■■■□□ 2.16
ITGA4-202ENST00000339307 MYOM2P54296 1465 aa28.52■■■□□ 2.16
ITGA4-202ENST00000339307 PRAM1Q96QH2 718 aa28.52■■■□□ 2.16
ITGA4-202ENST00000339307 POGKQ9P215 609 aa28.52■■■□□ 2.16
ITGA4-202ENST00000339307 UPF1Q92900 1129 aaKnown RBP eCLIP28.51■■■□□ 2.15
ITGA4-202ENST00000339307 SIRT1Q96EB6 747 aa28.51■■■□□ 2.15
ITGA4-202ENST00000339307 NRXN1Q9ULB1 1477 aa28.5■■■□□ 2.15
ITGA4-202ENST00000339307 PXDNQ92626 1479 aa28.49■■■□□ 2.15
ITGA4-202ENST00000339307 DCAF11Q8TEB1 546 aa28.49■■■□□ 2.15
ITGA4-202ENST00000339307 CDK12Q9NYV4 1490 aaPredicted RBP28.48■■■□□ 2.15
ITGA4-202ENST00000339307 FMN2Q9NZ56 1722 aa28.47■■■□□ 2.15
ITGA4-202ENST00000339307 PLEKHG5O94827 1062 aa28.45■■■□□ 2.15
ITGA4-202ENST00000339307 KRT28Q7Z3Y7 464 aa28.45■■■□□ 2.15
ITGA4-202ENST00000339307 TRPC5Q9UL62 973 aaPredicted RBP28.45■■■□□ 2.15
ITGA4-202ENST00000339307 TRAK1Q9UPV9 953 aa28.45■■■□□ 2.15
ITGA4-202ENST00000339307 COL22A1Q8NFW1 1626 aaPredicted RBP28.45■■■□□ 2.14
ITGA4-202ENST00000339307 RGS12O14924 1447 aa28.44■■■□□ 2.14
ITGA4-202ENST00000339307 PHF8Q9UPP1 1060 aa28.43■■■□□ 2.14
ITGA4-202ENST00000339307 HAP1P54257 671 aaPredicted RBP28.42■■■□□ 2.14
ITGA4-202ENST00000339307 FNBP4Q8N3X1 1017 aaPredicted RBP28.42■■■□□ 2.14
ITGA4-202ENST00000339307 LMOD2Q6P5Q4 547 aa28.41■■■□□ 2.14
ITGA4-202ENST00000339307 KIF1AQ12756 1690 aa28.41■■■□□ 2.14
ITGA4-202ENST00000339307 HRCP23327 699 aa28.4■■■□□ 2.14
ITGA4-202ENST00000339307 PSME1Q06323 249 aa28.4■■■□□ 2.14
ITGA4-202ENST00000339307 HIRIP3Q9BW71 556 aaPredicted RBP28.4■■■□□ 2.14
ITGA4-202ENST00000339307 SPATA31A3Q5VYP0 1347 aa28.39■■■□□ 2.14
ITGA4-202ENST00000339307 RGPD8O14715 1765 aaPredicted RBP28.39■■■□□ 2.14
ITGA4-202ENST00000339307 PMFBP1Q8TBY8 1022 aa28.37■■■□□ 2.13
ITGA4-202ENST00000339307 MINK1Q8N4C8 1332 aaPredicted RBP28.37■■■□□ 2.13
ITGA4-202ENST00000339307 DLC1Q96QB1 1528 aa28.34■■■□□ 2.13
ITGA4-202ENST00000339307 ADGRB1O14514 1584 aa28.32■■■□□ 2.12
ITGA4-202ENST00000339307 CABLES1Q8TDN4 633 aa28.32■■■□□ 2.12
ITGA4-202ENST00000339307 STAC3Q96MF2 364 aa28.32■■■□□ 2.12
ITGA4-202ENST00000339307 MARF1Q9Y4F3 1742 aaKnown RBP28.32■■■□□ 2.12
ITGA4-202ENST00000339307 ATRNO75882 1429 aa28.32■■■□□ 2.12
ITGA4-202ENST00000339307 TNS3Q68CZ2 1445 aa28.29■■■□□ 2.12
ITGA4-202ENST00000339307 BCL9LQ86UU0 1499 aa28.29■■■□□ 2.12
ITGA4-202ENST00000339307 ANKARQ7Z5J8 1434 aa28.27■■■□□ 2.12
ITGA4-202ENST00000339307 ATAD2Q6PL18 1390 aa28.27■■■□□ 2.12
ITGA4-202ENST00000339307 GJD4Q96KN9 370 aaPredicted RBP28.26■■■□□ 2.12
ITGA4-202ENST00000339307 UNC5CLQ8IV45 518 aa28.26■■■□□ 2.11
ITGA4-202ENST00000339307 SBNO1A3KN83 1393 aa28.25■■■□□ 2.11
ITGA4-202ENST00000339307 WASLO00401 505 aaPredicted RBP28.25■■■□□ 2.11
ITGA4-202ENST00000339307 EIF3AQ14152 1382 aaKnown RBP28.24■■■□□ 2.11
ITGA4-202ENST00000339307 USP32Q8NFA0 1604 aa28.24■■■□□ 2.11
ITGA4-202ENST00000339307 ADGRB2O60241 1585 aa28.23■■■□□ 2.11
ITGA4-202ENST00000339307 ARHGEF10O15013 1369 aa28.23■■■□□ 2.11
ITGA4-202ENST00000339307 GPRASP1Q5JY77 1395 aa28.23■■■□□ 2.11
ITGA4-202ENST00000339307 NGDNQ8NEJ9 315 aaKnown RBP28.22■■■□□ 2.11
ITGA4-202ENST00000339307 CCDC9Q9Y3X0 531 aaKnown RBP28.22■■■□□ 2.11
ITGA4-202ENST00000339307 PRR36Q9H6K5 1346 aa28.21■■■□□ 2.11
ITGA4-202ENST00000339307 PAK3O75914 559 aaPredicted RBP28.19■■■□□ 2.1
ITGA4-202ENST00000339307 SLIT2O94813 1529 aa28.19■■■□□ 2.1
ITGA4-202ENST00000339307 TULP4Q9NRJ4 1543 aa28.18■■■□□ 2.1
ITGA4-202ENST00000339307 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.15■■■□□ 2.1
ITGA4-202ENST00000339307 RALGAPBQ86X10 1494 aa28.14■■■□□ 2.1
ITGA4-202ENST00000339307 NUDT16Q96DE0 195 aaKnown RBP28.14■■■□□ 2.1
ITGA4-202ENST00000339307 ARHGEF28Q8N1W1 1705 aaKnown RBP28.13■■■□□ 2.09
ITGA4-202ENST00000339307 FAM83GA6ND36 823 aa28.12■■■□□ 2.09
ITGA4-202ENST00000339307 CDK19Q9BWU1 502 aa28.12■■■□□ 2.09
ITGA4-202ENST00000339307 VPS72Q15906 364 aa28.1■■■□□ 2.09
ITGA4-202ENST00000339307 GLI3P10071 1580 aa28.1■■■□□ 2.09
ITGA4-202ENST00000339307 A0A0G2JS52 829 aa28.09■■■□□ 2.09
ITGA4-202ENST00000339307 MYT1Q01538 1121 aa28.09■■■□□ 2.09
ITGA4-202ENST00000339307 NBPF1Q3BBV0 1214 aa28.09■■■□□ 2.09
ITGA4-202ENST00000339307 ABCA3Q99758 1704 aa28.09■■■□□ 2.09
ITGA4-202ENST00000339307 PLCH1Q4KWH8 1693 aa28.09■■■□□ 2.09
ITGA4-202ENST00000339307 TRPM3Q9HCF6 1732 aaPredicted RBP28.09■■■□□ 2.09
ITGA4-202ENST00000339307 SEPT12Q8IYM1 358 aa28.09■■■□□ 2.09
ITGA4-202ENST00000339307 BTG4Q9NY30 223 aa28.07■■■□□ 2.08
ITGA4-202ENST00000339307 CCDC125Q86Z20 511 aa28.04■■■□□ 2.08
ITGA4-202ENST00000339307 ITSN1Q15811 1721 aa28.04■■■□□ 2.08
ITGA4-202ENST00000339307 NWD2Q9ULI1 1742 aa28.04■■■□□ 2.08
ITGA4-202ENST00000339307 ALS2Q96Q42 1657 aa28.04■■■□□ 2.08
ITGA4-202ENST00000339307 ATP7BP35670 1465 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms