RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 TMEM132EQ6IEE7 984 aa27.78■■■□□ 2.04
PTDSS1-201ENST00000337004 MLH3Q9UHC1 1453 aa27.76■■■□□ 2.04
PTDSS1-201ENST00000337004 POGZQ7Z3K3 1410 aa27.76■■■□□ 2.03
PTDSS1-201ENST00000337004 ADGRB1O14514 1584 aa27.76■■■□□ 2.03
PTDSS1-201ENST00000337004 CFAP53Q96M91 514 aa27.76■■■□□ 2.03
PTDSS1-201ENST00000337004 PUS7Q96PZ0 661 aaKnown RBP27.76■■■□□ 2.03
PTDSS1-201ENST00000337004 NEUROD2Q15784 382 aa27.74■■■□□ 2.03
PTDSS1-201ENST00000337004 CD109Q6YHK3 1445 aa27.74■■■□□ 2.03
PTDSS1-201ENST00000337004 TCP11L2Q8N4U5 519 aa27.74■■■□□ 2.03
PTDSS1-201ENST00000337004 CLUAP1Q96AJ1 413 aa27.74■■■□□ 2.03
PTDSS1-201ENST00000337004 IGHDP01880 384 aa27.74■■■□□ 2.03
PTDSS1-201ENST00000337004 WDR63Q8IWG1 891 aa27.74■■■□□ 2.03
PTDSS1-201ENST00000337004 MTHFSP49914 203 aa27.72■■■□□ 2.03
PTDSS1-201ENST00000337004 EVC2Q86UK5 1308 aa27.71■■■□□ 2.03
PTDSS1-201ENST00000337004 PHF23Q9BUL5 403 aaPredicted RBP27.71■■■□□ 2.03
PTDSS1-201ENST00000337004 COG6Q9Y2V7 657 aa27.71■■■□□ 2.03
PTDSS1-201ENST00000337004 PPLO60437 1756 aa27.71■■■□□ 2.03
PTDSS1-201ENST00000337004 VGFO15240 615 aaPredicted RBP27.71■■■□□ 2.03
PTDSS1-201ENST00000337004 AAMPQ13685 434 aa27.71■■■□□ 2.03
PTDSS1-201ENST00000337004 PANK1Q8TE04 598 aa27.71■■■□□ 2.03
PTDSS1-201ENST00000337004 RRP7AQ9Y3A4 280 aaKnown RBP27.71■■■□□ 2.03
PTDSS1-201ENST00000337004 QRICH2Q9H0J4 1663 aa27.71■■■□□ 2.03
PTDSS1-201ENST00000337004 FRMPD1Q5SYB0 1578 aa27.7■■■□□ 2.02
PTDSS1-201ENST00000337004 CCDC27Q2M243 656 aa27.7■■■□□ 2.02
PTDSS1-201ENST00000337004 CFAP74Q9C0B2 1584 aa27.69■■■□□ 2.02
PTDSS1-201ENST00000337004 RARSP54136 660 aaKnown RBP27.69■■■□□ 2.02
PTDSS1-201ENST00000337004 FRAT1Q92837 279 aaPredicted RBP27.69■■■□□ 2.02
PTDSS1-201ENST00000337004 SLC4A3P48751 1232 aa27.68■■■□□ 2.02
PTDSS1-201ENST00000337004 MAPK8IP3Q9UPT6 1336 aa27.68■■■□□ 2.02
PTDSS1-201ENST00000337004 NCBP3Q53F19 620 aaKnown RBP27.67■■■□□ 2.02
PTDSS1-201ENST00000337004 SHPRHQ149N8 1683 aa27.67■■■□□ 2.02
PTDSS1-201ENST00000337004 ZC3H13Q5T200 1668 aaKnown RBP27.67■■■□□ 2.02
PTDSS1-201ENST00000337004 NSD2O96028 1365 aa27.67■■■□□ 2.02
PTDSS1-201ENST00000337004 IQSEC2Q5JU85 1478 aa27.67■■■□□ 2.02
PTDSS1-201ENST00000337004 ABCC3O15438 1527 aa27.67■■■□□ 2.02
PTDSS1-201ENST00000337004 USP32Q8NFA0 1604 aa27.67■■■□□ 2.02
PTDSS1-201ENST00000337004 ANKRD36BQ8N2N9 1353 aa27.65■■■□□ 2.02
PTDSS1-201ENST00000337004 HECW2Q9P2P5 1572 aa27.65■■■□□ 2.02
PTDSS1-201ENST00000337004 PMFBP1Q8TBY8 1022 aa27.64■■■□□ 2.01
PTDSS1-201ENST00000337004 MYH16Q9H6N6 1097 aa27.63■■■□□ 2.01
PTDSS1-201ENST00000337004 NFKBIBQ15653 356 aa27.62■■■□□ 2.01
PTDSS1-201ENST00000337004 NUTM2DQ5VT03 806 aaPredicted RBP27.6■■■□□ 2.01
PTDSS1-201ENST00000337004 U2AF1L5P0DN76 240 aaPredicted RBP27.59■■■□□ 2.01
PTDSS1-201ENST00000337004 U2AF1Q01081 240 aaKnown RBP eCLIP27.59■■■□□ 2.01
PTDSS1-201ENST00000337004 GLI2P10070 1586 aa27.59■■■□□ 2.01
PTDSS1-201ENST00000337004 CABP2Q9NPB3 220 aa27.57■■■□□ 2
PTDSS1-201ENST00000337004 TULP4Q9NRJ4 1543 aa27.56■■■□□ 2
PTDSS1-201ENST00000337004 CFAP65Q6ZU64 1925 aaKnown RBP27.55■■■□□ 2
PTDSS1-201ENST00000337004 CAMSAP1Q5T5Y3 1602 aa27.54■■■□□ 2
PTDSS1-201ENST00000337004 NEXMIFQ5QGS0 1516 aa27.54■■■□□ 2
PTDSS1-201ENST00000337004 RAPGEF3O95398 923 aa27.53■■■□□ 2
PTDSS1-201ENST00000337004 RLBP1P12271 317 aa27.53■■■□□ 2
PTDSS1-201ENST00000337004 OSCARQ8IYS5 282 aa27.53■■■□□ 2
PTDSS1-201ENST00000337004 BCL2L13Q9BXK5 485 aa27.53■■■□□ 2
PTDSS1-201ENST00000337004 IDI1Q13907 227 aa27.52■■■□□ 2
PTDSS1-201ENST00000337004 SLC52A1Q9NWF4 448 aa27.52■■■□□ 2
PTDSS1-201ENST00000337004 PCDHB15Q9Y5E8 787 aa27.52■■■□□ 2
PTDSS1-201ENST00000337004 ARHGAP31Q2M1Z3 1444 aa27.52■■■□□ 2
PTDSS1-201ENST00000337004 PIK3C2BO00750 1634 aa27.51■■■□□ 2
PTDSS1-201ENST00000337004 NEO1Q92859 1461 aa27.51■■■□□ 2
PTDSS1-201ENST00000337004 CT47B1P0C2W7 299 aaPredicted RBP27.51■■□□□ 1.99
PTDSS1-201ENST00000337004 GSE1Q14687 1217 aa27.51■■□□□ 1.99
PTDSS1-201ENST00000337004 RWDD1Q9H446 243 aaPredicted RBP27.51■■□□□ 1.99
PTDSS1-201ENST00000337004 ZFYVE9O95405 1425 aa27.5■■□□□ 1.99
PTDSS1-201ENST00000337004 USP19O94966 1318 aa27.5■■□□□ 1.99
PTDSS1-201ENST00000337004 SAFB2Q14151 953 aaKnown RBP eCLIP27.5■■□□□ 1.99
PTDSS1-201ENST00000337004 SRPK2P78362 688 aaKnown RBP27.5■■□□□ 1.99
PTDSS1-201ENST00000337004 ARHGEF28Q8N1W1 1705 aaKnown RBP27.49■■□□□ 1.99
PTDSS1-201ENST00000337004 ZMYM3Q14202 1370 aa27.49■■□□□ 1.99
PTDSS1-201ENST00000337004 ABCC11Q96J66 1382 aa27.49■■□□□ 1.99
PTDSS1-201ENST00000337004 TNNQ9UQP3 1299 aa27.48■■□□□ 1.99
PTDSS1-201ENST00000337004 ZKSCAN2Q63HK3 967 aa27.47■■□□□ 1.99
PTDSS1-201ENST00000337004 STK26Q9P289 416 aa27.47■■□□□ 1.99
PTDSS1-201ENST00000337004 A0A1W2PP64 1363 aa27.47■■□□□ 1.99
PTDSS1-201ENST00000337004 SIGLEC1Q9BZZ2 1709 aa27.47■■□□□ 1.99
PTDSS1-201ENST00000337004 MVPQ14764 893 aaKnown RBP27.46■■□□□ 1.99
PTDSS1-201ENST00000337004 SEC24BO95487 1268 aa27.45■■□□□ 1.99
PTDSS1-201ENST00000337004 BECN1Q14457 450 aa27.45■■□□□ 1.98
PTDSS1-201ENST00000337004 TERF2IPQ9NYB0 399 aa27.45■■□□□ 1.98
PTDSS1-201ENST00000337004 U2SURPO15042 1029 aaKnown RBP27.44■■□□□ 1.98
PTDSS1-201ENST00000337004 PDZRN3Q9UPQ7 1066 aa27.44■■□□□ 1.98
PTDSS1-201ENST00000337004 ATAD2Q6PL18 1390 aa27.44■■□□□ 1.98
PTDSS1-201ENST00000337004 FTSJ3Q8IY81 847 aaKnown RBP27.44■■□□□ 1.98
PTDSS1-201ENST00000337004 UPF2Q9HAU5 1272 aaKnown RBP27.44■■□□□ 1.98
PTDSS1-201ENST00000337004 DZIP1LQ8IYY4 767 aaKnown RBP27.43■■□□□ 1.98
PTDSS1-201ENST00000337004 PLEKHF1Q96S99 279 aa27.43■■□□□ 1.98
PTDSS1-201ENST00000337004 GGNBP2Q9H3C7 697 aa27.43■■□□□ 1.98
PTDSS1-201ENST00000337004 ADGRB2O60241 1585 aa27.43■■□□□ 1.98
PTDSS1-201ENST00000337004 DIP2CQ9Y2E4 1556 aa27.41■■□□□ 1.98
PTDSS1-201ENST00000337004 TMPOP42166 694 aaKnown RBP27.41■■□□□ 1.98
PTDSS1-201ENST00000337004 TSR2Q969E8 191 aaKnown RBP27.4■■□□□ 1.98
PTDSS1-201ENST00000337004 POGKQ9P215 609 aa27.39■■□□□ 1.98
PTDSS1-201ENST00000337004 VIRMAQ69YN4 1812 aaKnown RBP27.39■■□□□ 1.97
PTDSS1-201ENST00000337004 FYB1O15117 783 aa27.38■■□□□ 1.97
PTDSS1-201ENST00000337004 FRAT2O75474 233 aaPredicted RBP27.38■■□□□ 1.97
PTDSS1-201ENST00000337004 SMC4Q9NTJ3 1288 aa27.38■■□□□ 1.97
PTDSS1-201ENST00000337004 EXOSC9Q06265 439 aaKnown RBP27.38■■□□□ 1.97
PTDSS1-201ENST00000337004 PRAM1Q96QH2 718 aa27.37■■□□□ 1.97
PTDSS1-201ENST00000337004 PNNQ9H307 717 aaKnown RBP27.37■■□□□ 1.97
PTDSS1-201ENST00000337004 TRIM35Q9UPQ4 493 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms