RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 RAPGEF4Q8WZA2 1011 aa11.87□□□□□ -0.51
FNDC3B-201ENST00000336824 LRPPRCP42704 1394 aaKnown RBP11.86□□□□□ -0.51
FNDC3B-201ENST00000336824 UHRF1BP1Q6BDS2 1440 aa11.86□□□□□ -0.51
FNDC3B-201ENST00000336824 PRAG1Q86YV5 1406 aa11.86□□□□□ -0.51
FNDC3B-201ENST00000336824 SMC4Q9NTJ3 1288 aa11.86□□□□□ -0.51
FNDC3B-201ENST00000336824 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
FNDC3B-201ENST00000336824 ERICH6BQ5W0A0 696 aa11.86□□□□□ -0.51
FNDC3B-201ENST00000336824 WAPLQ7Z5K2 1190 aa11.85□□□□□ -0.51
FNDC3B-201ENST00000336824 MTHFSP49914 203 aa11.85□□□□□ -0.51
FNDC3B-201ENST00000336824 WASLO00401 505 aaPredicted RBP11.84□□□□□ -0.51
FNDC3B-201ENST00000336824 TET3O43151 1660 aa11.84□□□□□ -0.51
FNDC3B-201ENST00000336824 NUTM2GQ5VZR2 741 aa11.84□□□□□ -0.51
FNDC3B-201ENST00000336824 NSD3Q9BZ95 1437 aa11.84□□□□□ -0.51
FNDC3B-201ENST00000336824 TTC5Q8N0Z6 440 aa11.83□□□□□ -0.52
FNDC3B-201ENST00000336824 KCNH5Q8NCM2 988 aa11.83□□□□□ -0.52
FNDC3B-201ENST00000336824 CADPS2Q86UW7 1296 aa11.82□□□□□ -0.52
FNDC3B-201ENST00000336824 RRP7AQ9Y3A4 280 aaKnown RBP11.82□□□□□ -0.52
FNDC3B-201ENST00000336824 CFAP44Q96MT7 982 aa11.82□□□□□ -0.52
FNDC3B-201ENST00000336824 KAT6BQ8WYB5 2073 aa11.82□□□□□ -0.52
FNDC3B-201ENST00000336824 PPP2R1AP30153 589 aa11.82□□□□□ -0.52
FNDC3B-201ENST00000336824 MSH6P52701 1360 aa11.82□□□□□ -0.52
FNDC3B-201ENST00000336824 RIPK4P57078 832 aa11.82□□□□□ -0.52
FNDC3B-201ENST00000336824 YEATS2Q9ULM3 1422 aa11.82□□□□□ -0.52
FNDC3B-201ENST00000336824 NLRP2Q9NX02 1062 aa11.82□□□□□ -0.52
FNDC3B-201ENST00000336824 DNAJC5Q9H3Z4 198 aa11.82□□□□□ -0.52
FNDC3B-201ENST00000336824 ZNF330Q9Y3S2 320 aaPredicted RBP11.81□□□□□ -0.52
FNDC3B-201ENST00000336824 APAF1O14727 1248 aa11.81□□□□□ -0.52
FNDC3B-201ENST00000336824 GAS2L2Q8NHY3 880 aa11.81□□□□□ -0.52
FNDC3B-201ENST00000336824 ITPRIPQ8IWB1 547 aa11.81□□□□□ -0.52
FNDC3B-201ENST00000336824 NSD2O96028 1365 aa11.8□□□□□ -0.52
FNDC3B-201ENST00000336824 IQGAP3Q86VI3 1631 aa11.8□□□□□ -0.52
FNDC3B-201ENST00000336824 SPHKAPQ2M3C7 1700 aa11.79□□□□□ -0.52
FNDC3B-201ENST00000336824 GNAI1P63096 354 aa11.79□□□□□ -0.52
FNDC3B-201ENST00000336824 HMOX1P09601 288 aa11.78□□□□□ -0.52
FNDC3B-201ENST00000336824 PLEKHO1Q53GL0 409 aaPredicted RBP11.78□□□□□ -0.52
FNDC3B-201ENST00000336824 TMX4Q9H1E5 349 aaPredicted RBP11.78□□□□□ -0.52
FNDC3B-201ENST00000336824 PHF8Q9UPP1 1060 aa11.78□□□□□ -0.52
FNDC3B-201ENST00000336824 HMMRO75330 724 aa11.78□□□□□ -0.52
FNDC3B-201ENST00000336824 TRPM2O94759 1503 aa11.77□□□□□ -0.52
FNDC3B-201ENST00000336824 RWDD1Q9H446 243 aaPredicted RBP11.77□□□□□ -0.52
FNDC3B-201ENST00000336824 NPATQ14207 1427 aa11.77□□□□□ -0.53
FNDC3B-201ENST00000336824 BECN1Q14457 450 aa11.77□□□□□ -0.53
FNDC3B-201ENST00000336824 PRDM11Q9NQV5 511 aa11.76□□□□□ -0.53
FNDC3B-201ENST00000336824 TATP17735 454 aaPredicted RBP11.76□□□□□ -0.53
FNDC3B-201ENST00000336824 PIP4K2BP78356 416 aa11.76□□□□□ -0.53
FNDC3B-201ENST00000336824 PUS7Q96PZ0 661 aaKnown RBP11.76□□□□□ -0.53
FNDC3B-201ENST00000336824 UNC13BO14795 1591 aa11.75□□□□□ -0.53
FNDC3B-201ENST00000336824 DDRGK1Q96HY6 314 aa11.75□□□□□ -0.53
FNDC3B-201ENST00000336824 TBX22Q9Y458 520 aa11.75□□□□□ -0.53
FNDC3B-201ENST00000336824 EFCAB6Q5THR3 1501 aa11.75□□□□□ -0.53
FNDC3B-201ENST00000336824 CEP152O94986 1710 aa11.74□□□□□ -0.53
FNDC3B-201ENST00000336824 DDX58O95786 925 aaKnown RBP11.74□□□□□ -0.53
FNDC3B-201ENST00000336824 SLC4A10Q6U841 1118 aa11.74□□□□□ -0.53
FNDC3B-201ENST00000336824 TSPYL4Q9UJ04 414 aa11.74□□□□□ -0.53
FNDC3B-201ENST00000336824 GLI2P10070 1586 aa11.74□□□□□ -0.53
FNDC3B-201ENST00000336824 NEXNQ0ZGT2 675 aa11.74□□□□□ -0.53
FNDC3B-201ENST00000336824 SYTL4Q96C24 671 aaPredicted RBP11.74□□□□□ -0.53
FNDC3B-201ENST00000336824 YTHDC2Q9H6S0 1430 aaKnown RBP11.74□□□□□ -0.53
FNDC3B-201ENST00000336824 TOM1L2Q6ZVM7 507 aa11.73□□□□□ -0.53
FNDC3B-201ENST00000336824 TAF7LQ5H9L4 462 aa11.73□□□□□ -0.53
FNDC3B-201ENST00000336824 GPATCH3Q96I76 525 aa11.73□□□□□ -0.53
FNDC3B-201ENST00000336824 STRN4Q9NRL3 753 aa11.73□□□□□ -0.53
FNDC3B-201ENST00000336824 ADAMTS8Q9UP79 889 aa11.73□□□□□ -0.53
FNDC3B-201ENST00000336824 SPG7Q9UQ90 795 aa11.73□□□□□ -0.53
FNDC3B-201ENST00000336824 NLRP1Q9C000 1473 aa11.73□□□□□ -0.53
FNDC3B-201ENST00000336824 ZKSCAN2Q63HK3 967 aa11.73□□□□□ -0.53
FNDC3B-201ENST00000336824 KDM5AP29375 1690 aaKnown RBP11.73□□□□□ -0.53
FNDC3B-201ENST00000336824 TTC21AQ8NDW8 1320 aa11.73□□□□□ -0.53
FNDC3B-201ENST00000336824 PRKAR2BP31323 418 aa11.73□□□□□ -0.53
FNDC3B-201ENST00000336824 ABCC3O15438 1527 aa11.73□□□□□ -0.53
FNDC3B-201ENST00000336824 KIF16BQ96L93 1317 aa11.72□□□□□ -0.53
FNDC3B-201ENST00000336824 RGS3P49796 1198 aa11.72□□□□□ -0.53
FNDC3B-201ENST00000336824 HSP90AB1P08238 724 aaKnown RBP11.72□□□□□ -0.53
FNDC3B-201ENST00000336824 ASXL1Q8IXJ9 1541 aa11.72□□□□□ -0.53
FNDC3B-201ENST00000336824 DISP3Q9P2K9 1392 aa11.71□□□□□ -0.53
FNDC3B-201ENST00000336824 ANKRD36BQ8N2N9 1353 aa11.71□□□□□ -0.53
FNDC3B-201ENST00000336824 TMEM2Q9UHN6 1383 aa11.71□□□□□ -0.53
FNDC3B-201ENST00000336824 GTF2E1P29083 439 aaPredicted RBP11.71□□□□□ -0.53
FNDC3B-201ENST00000336824 SULT6B1Q6IMI4 303 aa11.71□□□□□ -0.53
FNDC3B-201ENST00000336824 B4GALNT3Q6L9W6 998 aa11.71□□□□□ -0.53
FNDC3B-201ENST00000336824 PPIP5K1Q6PFW1 1433 aa11.71□□□□□ -0.53
FNDC3B-201ENST00000336824 FOXO3O43524 673 aa11.71□□□□□ -0.54
FNDC3B-201ENST00000336824 UGGT1Q9NYU2 1555 aa11.71□□□□□ -0.54
FNDC3B-201ENST00000336824 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.54
FNDC3B-201ENST00000336824 NPHP3Q7Z494 1330 aa11.71□□□□□ -0.54
FNDC3B-201ENST00000336824 TOM1O60784 492 aa11.71□□□□□ -0.54
FNDC3B-201ENST00000336824 XPCQ01831 940 aaPredicted RBP11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 TCP11L2Q8N4U5 519 aa11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 CHMP3Q9Y3E7 222 aa11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 NCKAP5LQ9HCH0 1330 aa11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 FCHSD2O94868 740 aa11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 KRT28Q7Z3Y7 464 aa11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 ZC3H13Q5T200 1668 aaKnown RBP11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 NUTM2BA6NNL0 878 aaPredicted RBP11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 NUTM2EB1AL46 878 aaPredicted RBP11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 NUTM2AQ8IVF1 878 aaPredicted RBP11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 API5Q9BZZ5 524 aaKnown RBP11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 C19orf44Q9H6X5 657 aa11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 ERVK-7P63135 1459 aa11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 PNISRQ8TF01 805 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms