RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 DHX16O60231 1041 aaKnown RBP15.76■□□□□ 0.11
HLCS-201ENST00000336648 CDC45O75419 566 aa15.76■□□□□ 0.11
HLCS-201ENST00000336648 FKBP5Q13451 457 aaPredicted RBP15.76■□□□□ 0.11
HLCS-201ENST00000336648 VPS37CA5D8V6 355 aaPredicted RBP15.76■□□□□ 0.11
HLCS-201ENST00000336648 MIA2Q96PC5 1412 aa15.76■□□□□ 0.11
HLCS-201ENST00000336648 MRE11P49959 708 aa15.76■□□□□ 0.11
HLCS-201ENST00000336648 STK11IPQ8N1F8 1099 aa15.76■□□□□ 0.11
HLCS-201ENST00000336648 PLCD4Q9BRC7 762 aa15.76■□□□□ 0.11
HLCS-201ENST00000336648 PLIN1O60240 522 aa15.76■□□□□ 0.11
HLCS-201ENST00000336648 EIF2S2P20042 333 aaKnown RBP15.76■□□□□ 0.11
HLCS-201ENST00000336648 MCM2P49736 904 aa15.75■□□□□ 0.11
HLCS-201ENST00000336648 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
HLCS-201ENST00000336648 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
HLCS-201ENST00000336648 KIF7Q2M1P5 1343 aa15.75■□□□□ 0.11
HLCS-201ENST00000336648 FOXD4L6Q3SYB3 417 aaPredicted RBP15.74■□□□□ 0.11
HLCS-201ENST00000336648 FOXD4L3Q6VB84 417 aaPredicted RBP15.74■□□□□ 0.11
HLCS-201ENST00000336648 HSP90AB3PQ58FF7 597 aa15.74■□□□□ 0.11
HLCS-201ENST00000336648 C22orf23Q9BZE7 217 aa15.74■□□□□ 0.11
HLCS-201ENST00000336648 MBD3O95983 291 aa15.74■□□□□ 0.11
HLCS-201ENST00000336648 CT47A1Q5JQC4 288 aaPredicted RBP15.74■□□□□ 0.11
HLCS-201ENST00000336648 IFT57Q9NWB7 429 aa15.73■□□□□ 0.11
HLCS-201ENST00000336648 HIP1O00291 1037 aa15.73■□□□□ 0.11
HLCS-201ENST00000336648 PIP4K2AP48426 406 aaPredicted RBP15.73■□□□□ 0.11
HLCS-201ENST00000336648 SLC4A3P48751 1232 aa15.73■□□□□ 0.11
HLCS-201ENST00000336648 WASHC2AQ641Q2 1341 aa15.73■□□□□ 0.11
HLCS-201ENST00000336648 ODF2Q5BJF6 829 aa15.72■□□□□ 0.11
HLCS-201ENST00000336648 ZRSR2Q15696 482 aaKnown RBP15.72■□□□□ 0.11
HLCS-201ENST00000336648 PDCP20941 246 aa15.72■□□□□ 0.11
HLCS-201ENST00000336648 LEKR1Q6ZMV7 388 aa15.72■□□□□ 0.11
HLCS-201ENST00000336648 MYOM3Q5VTT5 1437 aa15.72■□□□□ 0.11
HLCS-201ENST00000336648 NUTM2FA1L443 756 aa15.71■□□□□ 0.11
HLCS-201ENST00000336648 TSPYL4Q9UJ04 414 aa15.71■□□□□ 0.11
HLCS-201ENST00000336648 MINK1Q8N4C8 1332 aaPredicted RBP15.71■□□□□ 0.11
HLCS-201ENST00000336648 NAP1L1P55209 391 aaKnown RBP15.7■□□□□ 0.1
HLCS-201ENST00000336648 CNTROBQ8N137 903 aa15.7■□□□□ 0.1
HLCS-201ENST00000336648 OFD1O75665 1012 aa15.7■□□□□ 0.1
HLCS-201ENST00000336648 SART3Q15020 963 aaKnown RBP15.7■□□□□ 0.1
HLCS-201ENST00000336648 KRI1Q8N9T8 703 aaKnown RBP15.7■□□□□ 0.1
HLCS-201ENST00000336648 GNAI3P08754 354 aa15.7■□□□□ 0.1
HLCS-201ENST00000336648 R3HCC1Q9Y3T6 440 aaKnown RBP15.7■□□□□ 0.1
HLCS-201ENST00000336648 PTPRGP23470 1445 aa15.69■□□□□ 0.1
HLCS-201ENST00000336648 RAD21O60216 631 aa15.69■□□□□ 0.1
HLCS-201ENST00000336648 TSPYL1Q9H0U9 437 aa15.69■□□□□ 0.1
HLCS-201ENST00000336648 EPS15P42566 896 aa15.69■□□□□ 0.1
HLCS-201ENST00000336648 RAPGEF4Q8WZA2 1011 aa15.68■□□□□ 0.1
HLCS-201ENST00000336648 SMARCE1Q969G3 411 aa15.68■□□□□ 0.1
HLCS-201ENST00000336648 UBTFL1P0CB47 393 aaPredicted RBP15.68■□□□□ 0.1
HLCS-201ENST00000336648 PSME1Q06323 249 aa15.68■□□□□ 0.1
HLCS-201ENST00000336648 RBM33Q96EV2 1170 aaKnown RBP15.68■□□□□ 0.1
HLCS-201ENST00000336648 BRD4O60885 1362 aaPredicted RBP15.68■□□□□ 0.1
HLCS-201ENST00000336648 SDF4Q9BRK5 362 aa15.67■□□□□ 0.1
HLCS-201ENST00000336648 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.67■□□□□ 0.14e-8■■■■■ 170.1
HLCS-201ENST00000336648 FILIP1LQ4L180 1135 aa15.67■□□□□ 0.1
HLCS-201ENST00000336648 HMGN5P82970 282 aaKnown RBP15.67■□□□□ 0.1
HLCS-201ENST00000336648 NASPP49321 788 aaPredicted RBP15.67■□□□□ 0.1
HLCS-201ENST00000336648 RIC3Q7Z5B4 369 aa15.66■□□□□ 0.1
HLCS-201ENST00000336648 ERC1Q8IUD2 1116 aa15.66■□□□□ 0.1
HLCS-201ENST00000336648 CUX1P39880 1505 aa15.66■□□□□ 0.1
HLCS-201ENST00000336648 TBC1D2BQ9UPU7 963 aa15.66■□□□□ 0.1
HLCS-201ENST00000336648 TXLNBQ8N3L3 684 aa15.65■□□□□ 0.1
HLCS-201ENST00000336648 ZNF396Q96N95 335 aaPredicted RBP15.65■□□□□ 0.1
HLCS-201ENST00000336648 CAGE1Q8TC20 777 aa15.65■□□□□ 0.1
HLCS-201ENST00000336648 CCDC7Q96M83 1385 aa15.65■□□□□ 0.1
HLCS-201ENST00000336648 CLASRPQ8N2M8 674 aaKnown RBP15.65■□□□□ 0.1
HLCS-201ENST00000336648 CNTLNQ9NXG0 1405 aa15.65■□□□□ 0.1
HLCS-201ENST00000336648 RABEP1Q15276 862 aa15.65■□□□□ 0.1
HLCS-201ENST00000336648 WASHC4Q2M389 1173 aa15.65■□□□□ 0.1
HLCS-201ENST00000336648 MSH5O43196 834 aa15.64■□□□□ 0.1
HLCS-201ENST00000336648 TXLNAP40222 546 aa15.64■□□□□ 0.1
HLCS-201ENST00000336648 LNPKQ9C0E8 428 aa15.64■□□□□ 0.1
HLCS-201ENST00000336648 KINO60870 393 aaKnown RBP15.64■□□□□ 0.09
HLCS-201ENST00000336648 SLC3A2P08195 630 aaKnown RBP15.64■□□□□ 0.09
HLCS-201ENST00000336648 GOLGA6L7A0A1B0GV03 622 aa15.64■□□□□ 0.09
HLCS-201ENST00000336648 SCAPERQ9BY12 1400 aa15.64■□□□□ 0.09
HLCS-201ENST00000336648 CNKSR2Q8WXI2 1034 aa15.64■□□□□ 0.09
HLCS-201ENST00000336648 CWC22Q9HCG8 908 aaKnown RBP15.64■□□□□ 0.09
HLCS-201ENST00000336648 INCENPQ9NQS7 918 aa15.63■□□□□ 0.09
HLCS-201ENST00000336648 HSP90AB2PQ58FF8 381 aa15.63■□□□□ 0.09
HLCS-201ENST00000336648 JMYQ8N9B5 988 aa15.63■□□□□ 0.09
HLCS-201ENST00000336648 USP8P40818 1118 aa15.63■□□□□ 0.09
HLCS-201ENST00000336648 CCDC30Q5VVM6 783 aa15.63■□□□□ 0.09
HLCS-201ENST00000336648 GAS2L2Q8NHY3 880 aa15.63■□□□□ 0.09
HLCS-201ENST00000336648 GCC1Q96CN9 775 aa15.63■□□□□ 0.09
HLCS-201ENST00000336648 KIAA0754O94854 1291 aa15.62■□□□□ 0.09
HLCS-201ENST00000336648 NEUROD6Q96NK8 337 aa15.62■□□□□ 0.09
HLCS-201ENST00000336648 LUC7LQ9NQ29 371 aaKnown RBP15.62■□□□□ 0.09
HLCS-201ENST00000336648 MAGEC2Q9UBF1 373 aaPredicted RBP15.62■□□□□ 0.09
HLCS-201ENST00000336648 FSD1Q9BTV5 496 aa15.61■□□□□ 0.09
HLCS-201ENST00000336648 TSPY26PQ9H489 355 aa15.61■□□□□ 0.09
HLCS-201ENST00000336648 NFKBIBQ15653 356 aa15.61■□□□□ 0.09
HLCS-201ENST00000336648 PDILTQ8N807 584 aa15.61■□□□□ 0.09
HLCS-201ENST00000336648 PDIA4P13667 645 aaKnown RBP15.61■□□□□ 0.09
HLCS-201ENST00000336648 DACH1Q9UI36 760 aa15.6■□□□□ 0.09
HLCS-201ENST00000336648 TRIM5Q9C035 493 aa15.6■□□□□ 0.09
HLCS-201ENST00000336648 CT47B1P0C2W7 299 aaPredicted RBP15.6■□□□□ 0.09
HLCS-201ENST00000336648 AEBP1Q8IUX7 1158 aa15.6■□□□□ 0.09
HLCS-201ENST00000336648 DYDC1Q8WWB3 177 aa15.6■□□□□ 0.09
HLCS-201ENST00000336648 ERLIN2O94905 339 aa15.6■□□□□ 0.09
HLCS-201ENST00000336648 ANKRD1Q15327 319 aa15.6■□□□□ 0.09
HLCS-201ENST00000336648 CAVIN1Q6NZI2 390 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms