RNA–Protein interactions for RNA: ENST00000336418.8

AP3S2-201, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S2, Length 5,891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-201ENST00000336418 USP47Q96K76 1375 aa13.87□□□□□ -0.19
AP3S2-201ENST00000336418 EIF2S2P20042 333 aaKnown RBP13.87□□□□□ -0.19
AP3S2-201ENST00000336418 SDF4Q9BRK5 362 aa13.87□□□□□ -0.19
AP3S2-201ENST00000336418 GPATCH11Q8N954 259 aa13.87□□□□□ -0.19
AP3S2-201ENST00000336418 NAT10Q9H0A0 1025 aaKnown RBP13.87□□□□□ -0.19
AP3S2-201ENST00000336418 IFIT2P09913 472 aaKnown RBP13.87□□□□□ -0.19
AP3S2-201ENST00000336418 SKAP1Q86WV1 359 aa13.87□□□□□ -0.19
AP3S2-201ENST00000336418 HOOK1Q9UJC3 728 aaKnown RBP13.87□□□□□ -0.19
AP3S2-201ENST00000336418 DCTN1Q14203 1278 aa13.86□□□□□ -0.19
AP3S2-201ENST00000336418 CT47B1P0C2W7 299 aaPredicted RBP13.86□□□□□ -0.19
AP3S2-201ENST00000336418 XPCQ01831 940 aaPredicted RBP13.86□□□□□ -0.19
AP3S2-201ENST00000336418 CHMP4AQ9BY43 222 aa13.86□□□□□ -0.19
AP3S2-201ENST00000336418 LETM1O95202 739 aaPredicted RBP13.85□□□□□ -0.19
AP3S2-201ENST00000336418 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.85□□□□□ -0.19
AP3S2-201ENST00000336418 NFXL1Q6ZNB6 911 aa13.85□□□□□ -0.19
AP3S2-201ENST00000336418 TERF2IPQ9NYB0 399 aa13.85□□□□□ -0.19
AP3S2-201ENST00000336418 NEK4P51957 841 aa13.85□□□□□ -0.19
AP3S2-201ENST00000336418 C1orf115Q9H7X2 142 aa13.85□□□□□ -0.19
AP3S2-201ENST00000336418 SPDYE4A6NLX3 237 aa13.84□□□□□ -0.19
AP3S2-201ENST00000336418 RAD21O60216 631 aa13.84□□□□□ -0.19
AP3S2-201ENST00000336418 CCDC88BA6NC98 1476 aa13.84□□□□□ -0.19
AP3S2-201ENST00000336418 KIAA0754O94854 1291 aa13.84□□□□□ -0.19
AP3S2-201ENST00000336418 RIPK4P57078 832 aa13.84□□□□□ -0.19
AP3S2-201ENST00000336418 HDGFP51858 240 aaKnown RBP13.84□□□□□ -0.19
AP3S2-201ENST00000336418 MBD3O95983 291 aa13.84□□□□□ -0.19
AP3S2-201ENST00000336418 DEF6Q9H4E7 631 aa13.84□□□□□ -0.19
AP3S2-201ENST00000336418 C11orf95C9JLR9 678 aaPredicted RBP13.84□□□□□ -0.19
AP3S2-201ENST00000336418 ZFP91Q96JP5 570 aaPredicted RBP13.83□□□□□ -0.2
AP3S2-201ENST00000336418 HDAC5Q9UQL6 1122 aa13.83□□□□□ -0.2
AP3S2-201ENST00000336418 MCM4P33991 863 aa13.83□□□□□ -0.2
AP3S2-201ENST00000336418 AMPHP49418 695 aa13.83□□□□□ -0.2
AP3S2-201ENST00000336418 CARMIL2Q6F5E8 1435 aa13.83□□□□□ -0.2
AP3S2-201ENST00000336418 RNF20Q5VTR2 975 aa13.82□□□□□ -0.2
AP3S2-201ENST00000336418 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.82□□□□□ -0.2
AP3S2-201ENST00000336418 KIF7Q2M1P5 1343 aa13.81□□□□□ -0.2
AP3S2-201ENST00000336418 HSP90AB2PQ58FF8 381 aa13.81□□□□□ -0.2
AP3S2-201ENST00000336418 ZSCAN30Q86W11 494 aa13.81□□□□□ -0.2
AP3S2-201ENST00000336418 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
AP3S2-201ENST00000336418 CCDC102AQ96A19 550 aa13.81□□□□□ -0.2
AP3S2-201ENST00000336418 HNRNPMP52272 730 aaKnown RBP eCLIP13.81□□□□□ -0.2
AP3S2-201ENST00000336418 CPLX2Q6PUV4 134 aaKnown RBP13.81□□□□□ -0.2
AP3S2-201ENST00000336418 STK11IPQ8N1F8 1099 aa13.81□□□□□ -0.2
AP3S2-201ENST00000336418 CCDC47Q96A33 483 aaKnown RBP13.81□□□□□ -0.2
AP3S2-201ENST00000336418 TRIM34Q9BYJ4 488 aa13.81□□□□□ -0.2
AP3S2-201ENST00000336418 SYCE3A1L190 88 aa13.8□□□□□ -0.2
AP3S2-201ENST00000336418 TAF3Q5VWG9 929 aa13.8□□□□□ -0.2
AP3S2-201ENST00000336418 TNNT1P13805 278 aa13.8□□□□□ -0.2
AP3S2-201ENST00000336418 BCAR3O75815 825 aa13.79□□□□□ -0.2
AP3S2-201ENST00000336418 MEX3CQ5U5Q3 659 aaKnown RBP13.79□□□□□ -0.2
AP3S2-201ENST00000336418 IPO4Q8TEX9 1081 aaKnown RBP13.79□□□□□ -0.2
AP3S2-201ENST00000336418 CNTLNQ9NXG0 1405 aa13.79□□□□□ -0.2
AP3S2-201ENST00000336418 PPP4R3BQ5MIZ7 849 aa13.79□□□□□ -0.2
AP3S2-201ENST00000336418 PDCL3Q9H2J4 239 aa13.79□□□□□ -0.2
AP3S2-201ENST00000336418 CCDC7Q96M83 1385 aa13.79□□□□□ -0.2
AP3S2-201ENST00000336418 GIMAP7Q8NHV1 300 aa13.79□□□□□ -0.2
AP3S2-201ENST00000336418 CHMP4CQ96CF2 233 aa13.79□□□□□ -0.2
AP3S2-201ENST00000336418 POLR3GO15318 223 aaPredicted RBP13.79□□□□□ -0.2
AP3S2-201ENST00000336418 KINO60870 393 aaKnown RBP13.79□□□□□ -0.2
AP3S2-201ENST00000336418 SERPINC1P01008 464 aa13.79□□□□□ -0.2
AP3S2-201ENST00000336418 ADAMTS8Q9UP79 889 aa13.79□□□□□ -0.2
AP3S2-201ENST00000336418 ANKRD30AQ9BXX3 1397 aa13.79□□□□□ -0.2
AP3S2-201ENST00000336418 K7ELQ4 463 aaPredicted RBP13.78□□□□□ -0.2
AP3S2-201ENST00000336418 STK3Q13188 491 aa13.78□□□□□ -0.2
AP3S2-201ENST00000336418 TNMDQ9H2S6 317 aa13.78□□□□□ -0.2
AP3S2-201ENST00000336418 ATP2B1P20020 1258 aa13.78□□□□□ -0.2
AP3S2-201ENST00000336418 TICAM2Q86XR7 235 aa13.78□□□□□ -0.2
AP3S2-201ENST00000336418 CCDC192P0DO97 292 aa13.78□□□□□ -0.2
AP3S2-201ENST00000336418 FKBP5Q13451 457 aaPredicted RBP13.77□□□□□ -0.2
AP3S2-201ENST00000336418 CT47A1Q5JQC4 288 aaPredicted RBP13.77□□□□□ -0.2
AP3S2-201ENST00000336418 EFCAB2Q5VUJ9 269 aa13.77□□□□□ -0.2
AP3S2-201ENST00000336418 CCP110O43303 1012 aa13.77□□□□□ -0.2
AP3S2-201ENST00000336418 OSCARQ8IYS5 282 aa13.77□□□□□ -0.2
AP3S2-201ENST00000336418 BBXQ8WY36 941 aaPredicted RBP13.77□□□□□ -0.2
AP3S2-201ENST00000336418 API5Q9BZZ5 524 aaKnown RBP13.77□□□□□ -0.21
AP3S2-201ENST00000336418 DHX16O60231 1041 aaKnown RBP13.77□□□□□ -0.21
AP3S2-201ENST00000336418 WASHC2AQ641Q2 1341 aa13.77□□□□□ -0.21
AP3S2-201ENST00000336418 KIF3BO15066 747 aa13.76□□□□□ -0.21
AP3S2-201ENST00000336418 RUNDC1Q96C34 613 aa13.76□□□□□ -0.21
AP3S2-201ENST00000336418 MAP4K4O95819 1239 aaPredicted RBP13.76□□□□□ -0.21
AP3S2-201ENST00000336418 GTF2F1P35269 517 aaKnown RBP eCLIP13.76□□□□□ -0.21
AP3S2-201ENST00000336418 ZFYVE27Q5T4F4 411 aa13.76□□□□□ -0.21
AP3S2-201ENST00000336418 FILIP1Q7Z7B0 1213 aa13.76□□□□□ -0.21
AP3S2-201ENST00000336418 TRDNQ13061 729 aa13.75□□□□□ -0.21
AP3S2-201ENST00000336418 RABEP1Q15276 862 aa13.75□□□□□ -0.21
AP3S2-201ENST00000336418 TMX1Q9H3N1 280 aa13.75□□□□□ -0.21
AP3S2-201ENST00000336418 HMOX1P09601 288 aa13.75□□□□□ -0.21
AP3S2-201ENST00000336418 OFD1O75665 1012 aa13.75□□□□□ -0.21
AP3S2-201ENST00000336418 CAMK4Q16566 473 aa13.75□□□□□ -0.21
AP3S2-201ENST00000336418 G3BP1Q13283 466 aaKnown RBP eCLIP13.75□□□□□ -0.21
AP3S2-201ENST00000336418 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
AP3S2-201ENST00000336418 EPS15P42566 896 aa13.74□□□□□ -0.21
AP3S2-201ENST00000336418 MTMR7Q9Y216 660 aa13.74□□□□□ -0.21
AP3S2-201ENST00000336418 EIF3JO75822 258 aaKnown RBP13.74□□□□□ -0.21
AP3S2-201ENST00000336418 SMARCE1Q969G3 411 aa13.74□□□□□ -0.21
AP3S2-201ENST00000336418 TAX1BP1Q86VP1 789 aa13.74□□□□□ -0.21
AP3S2-201ENST00000336418 G3V3G9 751 aa13.74□□□□□ -0.21
AP3S2-201ENST00000336418 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
AP3S2-201ENST00000336418 NGDNQ8NEJ9 315 aaKnown RBP13.74□□□□□ -0.21
AP3S2-201ENST00000336418 JPH4Q96JJ6 628 aa13.74□□□□□ -0.21
AP3S2-201ENST00000336418 SAFBQ15424 915 aaKnown RBP eCLIP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms