RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 KDM2BQ8NHM5 1336 aa19.32■□□□□ 0.68
UBA1-201ENST00000335972 KIAA1210Q9ULL0 1709 aa19.31■□□□□ 0.68
UBA1-201ENST00000335972 U2AF1L5P0DN76 240 aaPredicted RBP19.31■□□□□ 0.68
UBA1-201ENST00000335972 U2AF1Q01081 240 aaKnown RBP eCLIP19.31■□□□□ 0.684e-8■□□□□ 10.3
UBA1-201ENST00000335972 YEATS2Q9ULM3 1422 aa19.31■□□□□ 0.68
UBA1-201ENST00000335972 MLECQ14165 292 aa19.31■□□□□ 0.68
UBA1-201ENST00000335972 CLUAP1Q96AJ1 413 aa19.31■□□□□ 0.68
UBA1-201ENST00000335972 NRXN1Q9ULB1 1477 aa19.3■□□□□ 0.68
UBA1-201ENST00000335972 VGFO15240 615 aaPredicted RBP19.3■□□□□ 0.68
UBA1-201ENST00000335972 MS4A1P11836 297 aa19.3■□□□□ 0.68
UBA1-201ENST00000335972 ABCC3O15438 1527 aa19.3■□□□□ 0.68
UBA1-201ENST00000335972 NKTRP30414 1462 aaKnown RBP19.3■□□□□ 0.68
UBA1-201ENST00000335972 SLC24A1O60721 1099 aa19.29■□□□□ 0.68
UBA1-201ENST00000335972 IFT172Q9UG01 1749 aa19.29■□□□□ 0.68
UBA1-201ENST00000335972 U2SURPO15042 1029 aaKnown RBP19.29■□□□□ 0.68
UBA1-201ENST00000335972 IGHDP01880 384 aa19.29■□□□□ 0.68
UBA1-201ENST00000335972 FBLN1P23142 703 aa19.29■□□□□ 0.68
UBA1-201ENST00000335972 MLH3Q9UHC1 1453 aa19.29■□□□□ 0.68
UBA1-201ENST00000335972 CENPQQ7L2Z9 268 aaPredicted RBP19.28■□□□□ 0.68
UBA1-201ENST00000335972 CGNL1Q0VF96 1302 aa19.28■□□□□ 0.68
UBA1-201ENST00000335972 EVC2Q86UK5 1308 aa19.28■□□□□ 0.68
UBA1-201ENST00000335972 HECW2Q9P2P5 1572 aa19.28■□□□□ 0.68
UBA1-201ENST00000335972 LMTK2Q8IWU2 1503 aa19.27■□□□□ 0.68
UBA1-201ENST00000335972 RUNDC1Q96C34 613 aa19.27■□□□□ 0.68
UBA1-201ENST00000335972 STAG3Q9UJ98 1225 aa19.27■□□□□ 0.68
UBA1-201ENST00000335972 ADGRB1O14514 1584 aa19.27■□□□□ 0.68
UBA1-201ENST00000335972 PRAM1Q96QH2 718 aa19.26■□□□□ 0.67
UBA1-201ENST00000335972 POGKQ9P215 609 aa19.26■□□□□ 0.67
UBA1-201ENST00000335972 QRICH2Q9H0J4 1663 aa19.26■□□□□ 0.67
UBA1-201ENST00000335972 POLR3AO14802 1390 aaPredicted RBP19.26■□□□□ 0.67
UBA1-201ENST00000335972 SIGLEC1Q9BZZ2 1709 aa19.26■□□□□ 0.67
UBA1-201ENST00000335972 SBNO2Q9Y2G9 1366 aa19.25■□□□□ 0.67
UBA1-201ENST00000335972 PPLO60437 1756 aa19.24■□□□□ 0.67
UBA1-201ENST00000335972 RPGRIP1LQ68CZ1 1315 aa19.24■□□□□ 0.67
UBA1-201ENST00000335972 TSR2Q969E8 191 aaKnown RBP19.24■□□□□ 0.67
UBA1-201ENST00000335972 CFAP53Q96M91 514 aa19.24■□□□□ 0.67
UBA1-201ENST00000335972 PPM1GO15355 546 aaPredicted RBP19.23■□□□□ 0.67
UBA1-201ENST00000335972 RTL5Q5HYW3 569 aaPredicted RBP19.23■□□□□ 0.67
UBA1-201ENST00000335972 RLBP1P12271 317 aa19.22■□□□□ 0.67
UBA1-201ENST00000335972 FAM69CQ0P6D2 419 aa19.21■□□□□ 0.67
UBA1-201ENST00000335972 NEURL4Q96JN8 1562 aa19.2■□□□□ 0.66
UBA1-201ENST00000335972 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.2■□□□□ 0.661e-8■□□□□ 9.8
UBA1-201ENST00000335972 TULP4Q9NRJ4 1543 aa19.2■□□□□ 0.66
UBA1-201ENST00000335972 GLI2P10070 1586 aa19.2■□□□□ 0.66
UBA1-201ENST00000335972 C8orf34Q49A92 452 aa19.2■□□□□ 0.66
UBA1-201ENST00000335972 RARSP54136 660 aaKnown RBP19.19■□□□□ 0.66
UBA1-201ENST00000335972 A0A1W2PP64 1363 aa19.19■□□□□ 0.66
UBA1-201ENST00000335972 CAMSAP1Q5T5Y3 1602 aa19.19■□□□□ 0.66
UBA1-201ENST00000335972 WAPLQ7Z5K2 1190 aa19.19■□□□□ 0.66
UBA1-201ENST00000335972 SETBP1Q9Y6X0 1596 aa19.18■□□□□ 0.66
UBA1-201ENST00000335972 NEFMP07197 916 aa19.18■□□□□ 0.66
UBA1-201ENST00000335972 MYO3AQ8NEV4 1616 aa19.18■□□□□ 0.66
UBA1-201ENST00000335972 FAM161AQ3B820 660 aa19.17■□□□□ 0.66
UBA1-201ENST00000335972 DIP2CQ9Y2E4 1556 aa19.17■□□□□ 0.66
UBA1-201ENST00000335972 CABP1Q9NZU7 370 aa19.17■□□□□ 0.66
UBA1-201ENST00000335972 ANKRD36BQ8N2N9 1353 aa19.16■□□□□ 0.66
UBA1-201ENST00000335972 NEXMIFQ5QGS0 1516 aa19.16■□□□□ 0.66
UBA1-201ENST00000335972 FYB1O15117 783 aa19.14■□□□□ 0.66
UBA1-201ENST00000335972 CDK19Q9BWU1 502 aa19.14■□□□□ 0.66
UBA1-201ENST00000335972 SLC52A1Q9NWF4 448 aa19.14■□□□□ 0.66
UBA1-201ENST00000335972 PCDHB15Q9Y5E8 787 aa19.14■□□□□ 0.66
UBA1-201ENST00000335972 SHPRHQ149N8 1683 aa19.14■□□□□ 0.65
UBA1-201ENST00000335972 CFAP74Q9C0B2 1584 aa19.13■□□□□ 0.65
UBA1-201ENST00000335972 MYO5BQ9ULV0 1848 aa19.13■□□□□ 0.65
UBA1-201ENST00000335972 ZC3H13Q5T200 1668 aaKnown RBP19.13■□□□□ 0.65
UBA1-201ENST00000335972 NEO1Q92859 1461 aa19.12■□□□□ 0.65
UBA1-201ENST00000335972 SEC24BO95487 1268 aa19.12■□□□□ 0.65
UBA1-201ENST00000335972 DAXXQ9UER7 740 aaPredicted RBP19.12■□□□□ 0.65
UBA1-201ENST00000335972 PDE3AQ14432 1141 aa19.12■□□□□ 0.65
UBA1-201ENST00000335972 EXOSC9Q06265 439 aaKnown RBP19.11■□□□□ 0.65
UBA1-201ENST00000335972 PIK3C2BO00750 1634 aa19.11■□□□□ 0.65
UBA1-201ENST00000335972 ARHGEF28Q8N1W1 1705 aaKnown RBP19.1■□□□□ 0.65
UBA1-201ENST00000335972 NCKAP5LQ9HCH0 1330 aa19.1■□□□□ 0.65
UBA1-201ENST00000335972 WDR63Q8IWG1 891 aa19.09■□□□□ 0.65
UBA1-201ENST00000335972 MAPK8IP3Q9UPT6 1336 aa19.09■□□□□ 0.65
UBA1-201ENST00000335972 TERF2IPQ9NYB0 399 aa19.09■□□□□ 0.65
UBA1-201ENST00000335972 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.65
UBA1-201ENST00000335972 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.65
UBA1-201ENST00000335972 ZRANB1Q9UGI0 708 aa19.08■□□□□ 0.65
UBA1-201ENST00000335972 TMPOP42166 694 aaKnown RBP19.08■□□□□ 0.65
UBA1-201ENST00000335972 SMC4Q9NTJ3 1288 aa19.08■□□□□ 0.64
UBA1-201ENST00000335972 HMOX1P09601 288 aa19.07■□□□□ 0.64
UBA1-201ENST00000335972 NGEFQ8N5V2 710 aa19.07■□□□□ 0.64
UBA1-201ENST00000335972 YTHDC2Q9H6S0 1430 aaKnown RBP19.07■□□□□ 0.64
UBA1-201ENST00000335972 IQSEC2Q5JU85 1478 aa19.07■□□□□ 0.64
UBA1-201ENST00000335972 RIPK4P57078 832 aa19.07■□□□□ 0.64
UBA1-201ENST00000335972 MYH16Q9H6N6 1097 aa19.07■□□□□ 0.64
UBA1-201ENST00000335972 FTSJ3Q8IY81 847 aaKnown RBP19.07■□□□□ 0.64
UBA1-201ENST00000335972 DDRGK1Q96HY6 314 aa19.07■□□□□ 0.64
UBA1-201ENST00000335972 THUMPD2Q9BTF0 503 aaKnown RBP19.07■□□□□ 0.64
UBA1-201ENST00000335972 TRIM35Q9UPQ4 493 aa19.06■□□□□ 0.64
UBA1-201ENST00000335972 TSPOAP1O95153 1857 aa19.06■□□□□ 0.64
UBA1-201ENST00000335972 HDGFL2Q7Z4V5 671 aaPredicted RBP19.06■□□□□ 0.64
UBA1-201ENST00000335972 ABCC11Q96J66 1382 aa19.05■□□□□ 0.64
UBA1-201ENST00000335972 NUTM2FA1L443 756 aa19.04■□□□□ 0.64
UBA1-201ENST00000335972 PLEKHF1Q96S99 279 aa19.04■□□□□ 0.64
UBA1-201ENST00000335972 RICTORQ6R327 1708 aa19.04■□□□□ 0.64
UBA1-201ENST00000335972 DIAPH1O60610 1272 aaKnown RBP19.04■□□□□ 0.64
UBA1-201ENST00000335972 TXNDC2Q86VQ3 553 aa19.04■□□□□ 0.64
UBA1-201ENST00000335972 SSH1Q8WYL5 1049 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms