RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 NALCNQ8IZF0 1738 aa19.88■□□□□ 0.77
APOBEC3B-202ENST00000335760 MINK1Q8N4C8 1332 aaPredicted RBP19.87■□□□□ 0.77
APOBEC3B-202ENST00000335760 ADGRL3Q9HAR2 1447 aa19.87■□□□□ 0.77
APOBEC3B-202ENST00000335760 MSH6P52701 1360 aa19.86■□□□□ 0.77
APOBEC3B-202ENST00000335760 QRICH2Q9H0J4 1663 aa19.86■□□□□ 0.77
APOBEC3B-202ENST00000335760 C19orf44Q9H6X5 657 aa19.86■□□□□ 0.77
APOBEC3B-202ENST00000335760 IQSEC2Q5JU85 1478 aa19.85■□□□□ 0.77
APOBEC3B-202ENST00000335760 ST20-MTHFSA0A0A6YYL1 179 aa19.84■□□□□ 0.77
APOBEC3B-202ENST00000335760 HIRIP3Q9BW71 556 aaPredicted RBP19.84■□□□□ 0.77
APOBEC3B-202ENST00000335760 EIF4G2P78344 907 aaKnown RBP eCLIP19.83■□□□□ 0.77
APOBEC3B-202ENST00000335760 HSPA5P11021 654 aaKnown RBP19.82■□□□□ 0.76
APOBEC3B-202ENST00000335760 ATF3P18847 181 aa19.82■□□□□ 0.76
APOBEC3B-202ENST00000335760 ADGRB2O60241 1585 aa19.81■□□□□ 0.76
APOBEC3B-202ENST00000335760 DCCP43146 1447 aa19.8■□□□□ 0.76
APOBEC3B-202ENST00000335760 CDC42BPGQ6DT37 1551 aa19.79■□□□□ 0.76
APOBEC3B-202ENST00000335760 CADPS2Q86UW7 1296 aa19.79■□□□□ 0.76
APOBEC3B-202ENST00000335760 WASLO00401 505 aaPredicted RBP19.78■□□□□ 0.76
APOBEC3B-202ENST00000335760 TESK2Q96S53 571 aa19.78■□□□□ 0.76
APOBEC3B-202ENST00000335760 SBNO2Q9Y2G9 1366 aa19.78■□□□□ 0.76
APOBEC3B-202ENST00000335760 UBAP1LF5GYI3 381 aa19.76■□□□□ 0.75
APOBEC3B-202ENST00000335760 TOM1O60784 492 aa19.76■□□□□ 0.75
APOBEC3B-202ENST00000335760 CDK19Q9BWU1 502 aa19.76■□□□□ 0.75
APOBEC3B-202ENST00000335760 FMN2Q9NZ56 1722 aa19.76■□□□□ 0.75
APOBEC3B-202ENST00000335760 EVC2Q86UK5 1308 aa19.76■□□□□ 0.75
APOBEC3B-202ENST00000335760 NUTM2FA1L443 756 aa19.75■□□□□ 0.75
APOBEC3B-202ENST00000335760 TULP4Q9NRJ4 1543 aa19.75■□□□□ 0.75
APOBEC3B-202ENST00000335760 MST1RQ04912 1400 aa19.74■□□□□ 0.75
APOBEC3B-202ENST00000335760 SLC24A1O60721 1099 aa19.73■□□□□ 0.75
APOBEC3B-202ENST00000335760 SRPK2P78362 688 aaKnown RBP19.73■□□□□ 0.75
APOBEC3B-202ENST00000335760 SLAIN2Q9P270 581 aa19.73■□□□□ 0.75
APOBEC3B-202ENST00000335760 CABP2Q9NPB3 220 aa19.72■□□□□ 0.75
APOBEC3B-202ENST00000335760 TMF1P82094 1093 aa19.71■□□□□ 0.75
APOBEC3B-202ENST00000335760 C1orf167Q5SNV9 1468 aa19.71■□□□□ 0.75
APOBEC3B-202ENST00000335760 NUDT16Q96DE0 195 aaKnown RBP19.7■□□□□ 0.74
APOBEC3B-202ENST00000335760 USP32Q8NFA0 1604 aa19.69■□□□□ 0.74
APOBEC3B-202ENST00000335760 PRR36Q9H6K5 1346 aa19.69■□□□□ 0.74
APOBEC3B-202ENST00000335760 DISP3Q9P2K9 1392 aa19.69■□□□□ 0.74
APOBEC3B-202ENST00000335760 RGPD8O14715 1765 aaPredicted RBP19.69■□□□□ 0.74
APOBEC3B-202ENST00000335760 ANKARQ7Z5J8 1434 aa19.69■□□□□ 0.74
APOBEC3B-202ENST00000335760 PIP4K2BP78356 416 aa19.69■□□□□ 0.74
APOBEC3B-202ENST00000335760 SCAF1Q9H7N4 1312 aaKnown RBP19.67■□□□□ 0.74
APOBEC3B-202ENST00000335760 ESCO1Q5FWF5 840 aa19.67■□□□□ 0.74
APOBEC3B-202ENST00000335760 ORAI2Q96SN7 254 aa19.67■□□□□ 0.74
APOBEC3B-202ENST00000335760 ATP7BP35670 1465 aa19.66■□□□□ 0.74
APOBEC3B-202ENST00000335760 CDCA8Q53HL2 280 aa19.65■□□□□ 0.74
APOBEC3B-202ENST00000335760 ROBO1Q9Y6N7 1651 aa19.64■□□□□ 0.74
APOBEC3B-202ENST00000335760 BRINP3Q76B58 766 aa19.64■□□□□ 0.73
APOBEC3B-202ENST00000335760 PUS7Q96PZ0 661 aaKnown RBP19.64■□□□□ 0.73
APOBEC3B-202ENST00000335760 CCDC61Q9Y6R9 512 aa19.64■□□□□ 0.73
APOBEC3B-202ENST00000335760 ATAD2Q6PL18 1390 aa19.64■□□□□ 0.73
APOBEC3B-202ENST00000335760 ITSN1Q15811 1721 aa19.64■□□□□ 0.73
APOBEC3B-202ENST00000335760 PHF8Q9UPP1 1060 aa19.63■□□□□ 0.73
APOBEC3B-202ENST00000335760 TOPAZ1Q8N9V7 1692 aa19.62■□□□□ 0.73
APOBEC3B-202ENST00000335760 C11orf95C9JLR9 678 aaPredicted RBP19.62■□□□□ 0.73
APOBEC3B-202ENST00000335760 POLR3GLQ9BT43 218 aa19.62■□□□□ 0.73
APOBEC3B-202ENST00000335760 PPIP5K1Q6PFW1 1433 aa19.61■□□□□ 0.73
APOBEC3B-202ENST00000335760 PMFBP1Q8TBY8 1022 aa19.61■□□□□ 0.73
APOBEC3B-202ENST00000335760 KIF1AQ12756 1690 aa19.6■□□□□ 0.73
APOBEC3B-202ENST00000335760 TMC1Q8TDI8 760 aa19.59■□□□□ 0.73
APOBEC3B-202ENST00000335760 CABP1Q9NZU7 370 aa19.59■□□□□ 0.73
APOBEC3B-202ENST00000335760 PLEKHG3A1L390 1219 aa19.58■□□□□ 0.73
APOBEC3B-202ENST00000335760 FBXO41Q8TF61 875 aa19.58■□□□□ 0.73
APOBEC3B-202ENST00000335760 NGDNQ8NEJ9 315 aaKnown RBP19.57■□□□□ 0.72
APOBEC3B-202ENST00000335760 DDX17Q92841 729 aaKnown RBP19.57■□□□□ 0.72
APOBEC3B-202ENST00000335760 KIF7Q2M1P5 1343 aa19.57■□□□□ 0.72
APOBEC3B-202ENST00000335760 FOXO3O43524 673 aa19.57■□□□□ 0.72
APOBEC3B-202ENST00000335760 SLC12A5Q9H2X9 1139 aa19.57■□□□□ 0.72
APOBEC3B-202ENST00000335760 ACEP12821 1306 aa19.55■□□□□ 0.72
APOBEC3B-202ENST00000335760 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
APOBEC3B-202ENST00000335760 NHSL1Q5SYE7 1610 aa19.54■□□□□ 0.72
APOBEC3B-202ENST00000335760 PSME1Q06323 249 aa19.54■□□□□ 0.72
APOBEC3B-202ENST00000335760 CCDC7Q96M83 1385 aa19.54■□□□□ 0.72
APOBEC3B-202ENST00000335760 NINLQ9Y2I6 1382 aa19.54■□□□□ 0.72
APOBEC3B-202ENST00000335760 WASHC2AQ641Q2 1341 aa19.53■□□□□ 0.72
APOBEC3B-202ENST00000335760 NPHP3Q7Z494 1330 aa19.53■□□□□ 0.72
APOBEC3B-202ENST00000335760 MYOM1P52179 1685 aa19.53■□□□□ 0.72
APOBEC3B-202ENST00000335760 XPCQ01831 940 aaPredicted RBP19.53■□□□□ 0.72
APOBEC3B-202ENST00000335760 AHDC1Q5TGY3 1603 aaPredicted RBP19.53■□□□□ 0.72
APOBEC3B-202ENST00000335760 POLR3AO14802 1390 aaPredicted RBP19.53■□□□□ 0.72
APOBEC3B-202ENST00000335760 PHLPP1O60346 1717 aa19.52■□□□□ 0.72
APOBEC3B-202ENST00000335760 KRT28Q7Z3Y7 464 aa19.52■□□□□ 0.72
APOBEC3B-202ENST00000335760 HDGFL2Q7Z4V5 671 aaPredicted RBP19.51■□□□□ 0.71
APOBEC3B-202ENST00000335760 TERF2IPQ9NYB0 399 aa19.5■□□□□ 0.71
APOBEC3B-202ENST00000335760 AKAP12Q02952 1782 aa19.5■□□□□ 0.71
APOBEC3B-202ENST00000335760 CD163L1Q9NR16 1453 aa19.49■□□□□ 0.71
APOBEC3B-202ENST00000335760 ZNF692Q9BU19 519 aaPredicted RBP19.49■□□□□ 0.71
APOBEC3B-202ENST00000335760 CPSF1Q10570 1443 aaKnown RBP19.49■□□□□ 0.71
APOBEC3B-202ENST00000335760 SOS2Q07890 1332 aaPredicted RBP19.49■□□□□ 0.71
APOBEC3B-202ENST00000335760 PXDNQ92626 1479 aa19.49■□□□□ 0.71
APOBEC3B-202ENST00000335760 HSPA1LP34931 641 aa19.48■□□□□ 0.71
APOBEC3B-202ENST00000335760 A0A1W2PP64 1363 aa19.48■□□□□ 0.71
APOBEC3B-202ENST00000335760 KTN1Q86UP2 1357 aaKnown RBP19.48■□□□□ 0.71
APOBEC3B-202ENST00000335760 ANKRD36BQ8N2N9 1353 aa19.48■□□□□ 0.71
APOBEC3B-202ENST00000335760 USP6P35125 1406 aa19.46■□□□□ 0.71
APOBEC3B-202ENST00000335760 ZNF316A6NFI3 1004 aaPredicted RBP19.46■□□□□ 0.71
APOBEC3B-202ENST00000335760 COL16A1Q07092 1604 aaPredicted RBP19.46■□□□□ 0.71
APOBEC3B-202ENST00000335760 PAK3O75914 559 aaPredicted RBP19.45■□□□□ 0.7
APOBEC3B-202ENST00000335760 MON2Q7Z3U7 1717 aa19.45■□□□□ 0.7
APOBEC3B-202ENST00000335760 TRPM3Q9HCF6 1732 aaPredicted RBP19.44■□□□□ 0.7
APOBEC3B-202ENST00000335760 SBNO1A3KN83 1393 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms