RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 ERCC4Q92889 916 aaPredicted RBP20.05■□□□□ 0.8
PDZD8-201ENST00000334464 RBM33Q96EV2 1170 aaKnown RBP20.05■□□□□ 0.8
PDZD8-201ENST00000334464 RUNDC1Q96C34 613 aa20.05■□□□□ 0.8
PDZD8-201ENST00000334464 RRP7AQ9Y3A4 280 aaKnown RBP20.05■□□□□ 0.8
PDZD8-201ENST00000334464 PIP4K2AP48426 406 aaPredicted RBP20.05■□□□□ 0.8
PDZD8-201ENST00000334464 SLC3A2P08195 630 aaKnown RBP20.04■□□□□ 0.8
PDZD8-201ENST00000334464 FANCD2Q9BXW9 1451 aa20.04■□□□□ 0.8
PDZD8-201ENST00000334464 AEBP2Q6ZN18 517 aaPredicted RBP20.04■□□□□ 0.8
PDZD8-201ENST00000334464 CWC15Q9P013 229 aaKnown RBP20.04■□□□□ 0.8
PDZD8-201ENST00000334464 DHX57Q6P158 1386 aaKnown RBP20.04■□□□□ 0.8
PDZD8-201ENST00000334464 ZNF592Q92610 1267 aa20.04■□□□□ 0.8
PDZD8-201ENST00000334464 TSHZ2Q9NRE2 1034 aa20.03■□□□□ 0.8
PDZD8-201ENST00000334464 TXLNBQ8N3L3 684 aa20.03■□□□□ 0.8
PDZD8-201ENST00000334464 CNTLNQ9NXG0 1405 aa20.02■□□□□ 0.8
PDZD8-201ENST00000334464 FKBP5Q13451 457 aaPredicted RBP20.02■□□□□ 0.8
PDZD8-201ENST00000334464 RAD21O60216 631 aa20.02■□□□□ 0.8
PDZD8-201ENST00000334464 MCM2P49736 904 aa20.02■□□□□ 0.8
PDZD8-201ENST00000334464 JPH4Q96JJ6 628 aa20.02■□□□□ 0.8
PDZD8-201ENST00000334464 MNS1Q8NEH6 495 aa20.02■□□□□ 0.8
PDZD8-201ENST00000334464 PRKRIP1Q9H875 184 aaPredicted RBP20.02■□□□□ 0.79
PDZD8-201ENST00000334464 OFD1O75665 1012 aa20.01■□□□□ 0.79
PDZD8-201ENST00000334464 NAP1L1P55209 391 aaKnown RBP20.01■□□□□ 0.79
PDZD8-201ENST00000334464 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.01■□□□□ 0.795e-8■■■■■ 111.5
PDZD8-201ENST00000334464 FANCIQ9NVI1 1328 aa20■□□□□ 0.79
PDZD8-201ENST00000334464 GAPVD1Q14C86 1478 aa20■□□□□ 0.79
PDZD8-201ENST00000334464 TXLNAP40222 546 aa20■□□□□ 0.79
PDZD8-201ENST00000334464 MAP7D2Q96T17 732 aa20■□□□□ 0.79
PDZD8-201ENST00000334464 ZRSR2Q15696 482 aaKnown RBP20■□□□□ 0.79
PDZD8-201ENST00000334464 MEX3CQ5U5Q3 659 aaKnown RBP20■□□□□ 0.79
PDZD8-201ENST00000334464 HMGB2P26583 209 aaKnown RBP19.99■□□□□ 0.79
PDZD8-201ENST00000334464 CCDC191Q8NCU4 936 aa19.99■□□□□ 0.79
PDZD8-201ENST00000334464 RIPK4P57078 832 aa19.99■□□□□ 0.79
PDZD8-201ENST00000334464 MSH5O43196 834 aa19.99■□□□□ 0.79
PDZD8-201ENST00000334464 LUC7LQ9NQ29 371 aaKnown RBP19.99■□□□□ 0.79
PDZD8-201ENST00000334464 CCDC39Q9UFE4 941 aa19.99■□□□□ 0.79
PDZD8-201ENST00000334464 CNTROBQ8N137 903 aa19.99■□□□□ 0.79
PDZD8-201ENST00000334464 VPS37CA5D8V6 355 aaPredicted RBP19.98■□□□□ 0.79
PDZD8-201ENST00000334464 EIF2S2P20042 333 aaKnown RBP19.97■□□□□ 0.79
PDZD8-201ENST00000334464 RAPGEF4Q8WZA2 1011 aa19.97■□□□□ 0.79
PDZD8-201ENST00000334464 MBD3O95983 291 aa19.97■□□□□ 0.79
PDZD8-201ENST00000334464 ARHGAP5Q13017 1502 aa19.97■□□□□ 0.79
PDZD8-201ENST00000334464 TBC1D2BQ9UPU7 963 aa19.97■□□□□ 0.79
PDZD8-201ENST00000334464 NUTM2DQ5VT03 806 aaPredicted RBP19.97■□□□□ 0.79
PDZD8-201ENST00000334464 WWC2Q6AWC2 1192 aa19.97■□□□□ 0.79
PDZD8-201ENST00000334464 SMARCE1Q969G3 411 aa19.97■□□□□ 0.79
PDZD8-201ENST00000334464 IFT57Q9NWB7 429 aa19.96■□□□□ 0.79
PDZD8-201ENST00000334464 HECW1Q76N89 1606 aa19.96■□□□□ 0.79
PDZD8-201ENST00000334464 MINK1Q8N4C8 1332 aaPredicted RBP19.95■□□□□ 0.78
PDZD8-201ENST00000334464 CDC45O75419 566 aa19.95■□□□□ 0.78
PDZD8-201ENST00000334464 ERC1Q8IUD2 1116 aa19.95■□□□□ 0.78
PDZD8-201ENST00000334464 JMYQ8N9B5 988 aa19.95■□□□□ 0.78
PDZD8-201ENST00000334464 COG6Q9Y2V7 657 aa19.95■□□□□ 0.78
PDZD8-201ENST00000334464 KINO60870 393 aaKnown RBP19.95■□□□□ 0.78
PDZD8-201ENST00000334464 ATF3P18847 181 aa19.95■□□□□ 0.78
PDZD8-201ENST00000334464 CRBNQ96SW2 442 aa19.95■□□□□ 0.78
PDZD8-201ENST00000334464 BRD4O60885 1362 aaPredicted RBP19.95■□□□□ 0.78
PDZD8-201ENST00000334464 CAGE1Q8TC20 777 aa19.94■□□□□ 0.78
PDZD8-201ENST00000334464 CCDC7Q96M83 1385 aa19.94■□□□□ 0.78
PDZD8-201ENST00000334464 BCL2L13Q9BXK5 485 aa19.94■□□□□ 0.78
PDZD8-201ENST00000334464 TSPYL4Q9UJ04 414 aa19.94■□□□□ 0.78
PDZD8-201ENST00000334464 UBTFL1P0CB47 393 aaPredicted RBP19.94■□□□□ 0.78
PDZD8-201ENST00000334464 HSP90AB2PQ58FF8 381 aa19.94■□□□□ 0.78
PDZD8-201ENST00000334464 FAM43AQ8N2R8 423 aa19.93■□□□□ 0.78
PDZD8-201ENST00000334464 NUTM2FA1L443 756 aa19.93■□□□□ 0.78
PDZD8-201ENST00000334464 GPRASP1Q5JY77 1395 aa19.93■□□□□ 0.78
PDZD8-201ENST00000334464 FGD6Q6ZV73 1430 aa19.93■□□□□ 0.78
PDZD8-201ENST00000334464 SYTL4Q96C24 671 aaPredicted RBP19.92■□□□□ 0.78
PDZD8-201ENST00000334464 GNAI3P08754 354 aa19.92■□□□□ 0.78
PDZD8-201ENST00000334464 PLEKHH2Q8IVE3 1493 aa19.92■□□□□ 0.78
PDZD8-201ENST00000334464 ERLIN2O94905 339 aa19.92■□□□□ 0.78
PDZD8-201ENST00000334464 PDIA4P13667 645 aaKnown RBP19.92■□□□□ 0.78
PDZD8-201ENST00000334464 PKNOX2Q96KN3 472 aa19.92■□□□□ 0.78
PDZD8-201ENST00000334464 C22orf23Q9BZE7 217 aa19.92■□□□□ 0.78
PDZD8-201ENST00000334464 EFCAB5A4FU69 1503 aa19.91■□□□□ 0.78
PDZD8-201ENST00000334464 ZNF396Q96N95 335 aaPredicted RBP19.91■□□□□ 0.78
PDZD8-201ENST00000334464 GNL3LQ9NVN8 582 aaKnown RBP19.91■□□□□ 0.78
PDZD8-201ENST00000334464 FOXD4L6Q3SYB3 417 aaPredicted RBP19.91■□□□□ 0.78
PDZD8-201ENST00000334464 FOXD4L3Q6VB84 417 aaPredicted RBP19.91■□□□□ 0.78
PDZD8-201ENST00000334464 PATL2C9JE40 543 aaKnown RBP19.91■□□□□ 0.78
PDZD8-201ENST00000334464 SDF4Q9BRK5 362 aa19.91■□□□□ 0.78
PDZD8-201ENST00000334464 ERICH3Q5RHP9 1530 aa19.91■□□□□ 0.78
PDZD8-201ENST00000334464 FBXW7Q969H0 707 aa19.91■□□□□ 0.78
PDZD8-201ENST00000334464 FILIP1LQ4L180 1135 aa19.91■□□□□ 0.78
PDZD8-201ENST00000334464 MAGEC2Q9UBF1 373 aaPredicted RBP19.9■□□□□ 0.78
PDZD8-201ENST00000334464 ELL2O00472 640 aaPredicted RBP19.9■□□□□ 0.78
PDZD8-201ENST00000334464 CDK5RAP3Q96JB5 506 aa19.9■□□□□ 0.78
PDZD8-201ENST00000334464 RIC3Q7Z5B4 369 aa19.9■□□□□ 0.78
PDZD8-201ENST00000334464 NASPP49321 788 aaPredicted RBP19.9■□□□□ 0.78
PDZD8-201ENST00000334464 HMGN5P82970 282 aaKnown RBP19.89■□□□□ 0.78
PDZD8-201ENST00000334464 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.78
PDZD8-201ENST00000334464 APAF1O14727 1248 aa19.89■□□□□ 0.77
PDZD8-201ENST00000334464 KIF6Q6ZMV9 814 aa19.89■□□□□ 0.77
PDZD8-201ENST00000334464 ANKRD18AQ8IVF6 992 aa19.89■□□□□ 0.77
PDZD8-201ENST00000334464 STIM1Q13586 685 aa19.88■□□□□ 0.77
PDZD8-201ENST00000334464 SYCP1Q15431 976 aa19.88■□□□□ 0.77
PDZD8-201ENST00000334464 GAS2L2Q8NHY3 880 aa19.88■□□□□ 0.77
PDZD8-201ENST00000334464 CCDC30Q5VVM6 783 aa19.88■□□□□ 0.77
PDZD8-201ENST00000334464 DCAF8L1A6NGE4 600 aa19.88■□□□□ 0.77
PDZD8-201ENST00000334464 CCAR1Q8IX12 1150 aaKnown RBP19.88■□□□□ 0.77
PDZD8-201ENST00000334464 ANKRD1Q15327 319 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms