RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 U2AF1L5P0DN76 240 aaPredicted RBP14.87□□□□□ -0.03
LIMK2-202ENST00000333611 U2AF1Q01081 240 aaKnown RBP eCLIP14.87□□□□□ -0.03
LIMK2-202ENST00000333611 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.87□□□□□ -0.03
LIMK2-202ENST00000333611 SLC12A5Q9H2X9 1139 aa14.87□□□□□ -0.03
LIMK2-202ENST00000333611 TCP11L2Q8N4U5 519 aa14.86□□□□□ -0.03
LIMK2-202ENST00000333611 PDZRN3Q9UPQ7 1066 aa14.86□□□□□ -0.03
LIMK2-202ENST00000333611 RLBP1P12271 317 aa14.86□□□□□ -0.03
LIMK2-202ENST00000333611 CARD14Q9BXL6 1004 aa14.86□□□□□ -0.03
LIMK2-202ENST00000333611 NKTRP30414 1462 aaKnown RBP14.86□□□□□ -0.03
LIMK2-202ENST00000333611 TRPM1Q7Z4N2 1603 aa14.85□□□□□ -0.03
LIMK2-202ENST00000333611 ZNF521Q96K83 1311 aa14.85□□□□□ -0.03
LIMK2-202ENST00000333611 FAM177BA6PVY3 158 aa14.85□□□□□ -0.03
LIMK2-202ENST00000333611 TMEM132EQ6IEE7 984 aa14.85□□□□□ -0.03
LIMK2-202ENST00000333611 PCDHB15Q9Y5E8 787 aa14.85□□□□□ -0.03
LIMK2-202ENST00000333611 TSC1Q92574 1164 aa14.85□□□□□ -0.03
LIMK2-202ENST00000333611 CGNQ9P2M7 1197 aaKnown RBP14.85□□□□□ -0.03
LIMK2-202ENST00000333611 GTF2E1P29083 439 aaPredicted RBP14.84□□□□□ -0.03
LIMK2-202ENST00000333611 MAPK8IP3Q9UPT6 1336 aa14.84□□□□□ -0.03
LIMK2-202ENST00000333611 NASPP49321 788 aaPredicted RBP14.83□□□□□ -0.03
LIMK2-202ENST00000333611 TSR2Q969E8 191 aaKnown RBP14.83□□□□□ -0.03
LIMK2-202ENST00000333611 TBC1D2Q9BYX2 928 aa14.83□□□□□ -0.03
LIMK2-202ENST00000333611 ZBTB22O15209 634 aa14.83□□□□□ -0.04
LIMK2-202ENST00000333611 AEBP1Q8IUX7 1158 aa14.83□□□□□ -0.04
LIMK2-202ENST00000333611 E9PCH4 1651 aa14.83□□□□□ -0.04
LIMK2-202ENST00000333611 WDR7Q9Y4E6 1490 aa14.83□□□□□ -0.04
LIMK2-202ENST00000333611 RIPK4P57078 832 aa14.83□□□□□ -0.04
LIMK2-202ENST00000333611 ADGRF5Q8IZF2 1346 aa14.83□□□□□ -0.04
LIMK2-202ENST00000333611 MTHFSP49914 203 aa14.82□□□□□ -0.04
LIMK2-202ENST00000333611 SAMD9LQ8IVG5 1584 aa14.82□□□□□ -0.04
LIMK2-202ENST00000333611 SPDYE4A6NLX3 237 aa14.82□□□□□ -0.04
LIMK2-202ENST00000333611 ITPRIPQ8IWB1 547 aa14.82□□□□□ -0.04
LIMK2-202ENST00000333611 PDE3AQ14432 1141 aa14.81□□□□□ -0.04
LIMK2-202ENST00000333611 HSP90AB1P08238 724 aaKnown RBP14.81□□□□□ -0.04
LIMK2-202ENST00000333611 HSCBQ8IWL3 235 aa14.81□□□□□ -0.04
LIMK2-202ENST00000333611 PMFBP1Q8TBY8 1022 aa14.81□□□□□ -0.04
LIMK2-202ENST00000333611 STAC3Q96MF2 364 aa14.81□□□□□ -0.04
LIMK2-202ENST00000333611 MAP7D2Q96T17 732 aa14.81□□□□□ -0.04
LIMK2-202ENST00000333611 EIF3AQ14152 1382 aaKnown RBP14.81□□□□□ -0.04
LIMK2-202ENST00000333611 PPP4R3BQ5MIZ7 849 aa14.8□□□□□ -0.04
LIMK2-202ENST00000333611 ZNF771Q7L3S4 317 aaPredicted RBP14.8□□□□□ -0.04
LIMK2-202ENST00000333611 SMC4Q9NTJ3 1288 aa14.8□□□□□ -0.04
LIMK2-202ENST00000333611 RARSP54136 660 aaKnown RBP14.8□□□□□ -0.04
LIMK2-202ENST00000333611 ZSCAN30Q86W11 494 aa14.8□□□□□ -0.04
LIMK2-202ENST00000333611 RWDD1Q9H446 243 aaPredicted RBP14.8□□□□□ -0.04
LIMK2-202ENST00000333611 USP19O94966 1318 aa14.8□□□□□ -0.04
LIMK2-202ENST00000333611 CFAP53Q96M91 514 aa14.79□□□□□ -0.04
LIMK2-202ENST00000333611 CHMP5Q9NZZ3 219 aa14.79□□□□□ -0.04
LIMK2-202ENST00000333611 PRDM15P57071 1507 aaPredicted RBP14.79□□□□□ -0.04
LIMK2-202ENST00000333611 JARID2Q92833 1246 aaPredicted RBP14.79□□□□□ -0.04
LIMK2-202ENST00000333611 ASXL1Q8IXJ9 1541 aa14.79□□□□□ -0.04
LIMK2-202ENST00000333611 GGT6Q6P531 493 aa14.79□□□□□ -0.04
LIMK2-202ENST00000333611 GAS2L3Q86XJ1 694 aa14.79□□□□□ -0.04
LIMK2-202ENST00000333611 STK26Q9P289 416 aa14.79□□□□□ -0.04
LIMK2-202ENST00000333611 ABCA8O94911 1581 aa14.78□□□□□ -0.04
LIMK2-202ENST00000333611 ADCY10Q96PN6 1610 aa14.78□□□□□ -0.04
LIMK2-202ENST00000333611 RUNDC1Q96C34 613 aa14.78□□□□□ -0.04
LIMK2-202ENST00000333611 CERS3Q8IU89 383 aa14.77□□□□□ -0.04
LIMK2-202ENST00000333611 DDX49Q9Y6V7 483 aaKnown RBP14.77□□□□□ -0.04
LIMK2-202ENST00000333611 TAF7LQ5H9L4 462 aa14.77□□□□□ -0.05
LIMK2-202ENST00000333611 SMAP1Q8IYB5 467 aaPredicted RBP14.77□□□□□ -0.05
LIMK2-202ENST00000333611 SCAF11Q99590 1463 aaKnown RBP14.77□□□□□ -0.05
LIMK2-202ENST00000333611 FSD2A1L4K1 749 aa14.76□□□□□ -0.05
LIMK2-202ENST00000333611 DDX11L8A8MPP1 907 aa14.76□□□□□ -0.05
LIMK2-202ENST00000333611 PLCB2Q00722 1185 aa14.76□□□□□ -0.05
LIMK2-202ENST00000333611 TRMT2AQ8IZ69 625 aaKnown RBP14.76□□□□□ -0.05
LIMK2-202ENST00000333611 TRERF1Q96PN7 1200 aa14.76□□□□□ -0.05
LIMK2-202ENST00000333611 NUP160Q12769 1436 aa14.76□□□□□ -0.05
LIMK2-202ENST00000333611 TRAPPC8Q9Y2L5 1435 aa14.75□□□□□ -0.05
LIMK2-202ENST00000333611 KANK1Q14678 1352 aa14.75□□□□□ -0.05
LIMK2-202ENST00000333611 OFD1O75665 1012 aa14.75□□□□□ -0.05
LIMK2-202ENST00000333611 C22orf23Q9BZE7 217 aa14.75□□□□□ -0.05
LIMK2-202ENST00000333611 NSD3Q9BZ95 1437 aa14.74□□□□□ -0.05
LIMK2-202ENST00000333611 RNF214Q8ND24 703 aa14.74□□□□□ -0.05
LIMK2-202ENST00000333611 GOLGA6L22H0YM25 854 aa14.74□□□□□ -0.05
LIMK2-202ENST00000333611 EXOSC9Q06265 439 aaKnown RBP14.74□□□□□ -0.05
LIMK2-202ENST00000333611 ZKSCAN2Q63HK3 967 aa14.74□□□□□ -0.05
LIMK2-202ENST00000333611 DZIP1LQ8IYY4 767 aaKnown RBP14.74□□□□□ -0.05
LIMK2-202ENST00000333611 LNPKQ9C0E8 428 aa14.73□□□□□ -0.05
LIMK2-202ENST00000333611 PIK3C2GO75747 1445 aa14.73□□□□□ -0.05
LIMK2-202ENST00000333611 GBP4Q96PP9 640 aa14.73□□□□□ -0.05
LIMK2-202ENST00000333611 ARHGEF5Q12774 1597 aa14.73□□□□□ -0.05
LIMK2-202ENST00000333611 FOXD4L5Q5VV16 416 aaPredicted RBP14.72□□□□□ -0.05
LIMK2-202ENST00000333611 FOXD4L4Q8WXT5 416 aaPredicted RBP14.72□□□□□ -0.05
LIMK2-202ENST00000333611 CABP2Q9NPB3 220 aa14.72□□□□□ -0.05
LIMK2-202ENST00000333611 ELL2O00472 640 aaPredicted RBP14.72□□□□□ -0.05
LIMK2-202ENST00000333611 TBC1D32Q96NH3 1257 aa14.72□□□□□ -0.05
LIMK2-202ENST00000333611 GGNBP2Q9H3C7 697 aa14.72□□□□□ -0.05
LIMK2-202ENST00000333611 EIF2AK4Q9P2K8 1649 aaKnown RBP14.71□□□□□ -0.05
LIMK2-202ENST00000333611 SRPK2P78362 688 aaKnown RBP14.71□□□□□ -0.05
LIMK2-202ENST00000333611 CCDC173Q0VFZ6 552 aa14.71□□□□□ -0.05
LIMK2-202ENST00000333611 TTC37Q6PGP7 1564 aa14.71□□□□□ -0.05
LIMK2-202ENST00000333611 INSRP06213 1382 aa14.71□□□□□ -0.05
LIMK2-202ENST00000333611 CDC42BPBQ9Y5S2 1711 aa14.7□□□□□ -0.06
LIMK2-202ENST00000333611 MVPQ14764 893 aaKnown RBP14.7□□□□□ -0.06
LIMK2-202ENST00000333611 ZNF830Q96NB3 372 aaPredicted RBP14.7□□□□□ -0.06
LIMK2-202ENST00000333611 SCAPERQ9BY12 1400 aa14.69□□□□□ -0.06
LIMK2-202ENST00000333611 MYO5CQ9NQX4 1742 aa14.69□□□□□ -0.06
LIMK2-202ENST00000333611 CAVIN1Q6NZI2 390 aaKnown RBP14.69□□□□□ -0.06
LIMK2-202ENST00000333611 C1orf115Q9H7X2 142 aa14.69□□□□□ -0.06
LIMK2-202ENST00000333611 ZBTB9Q96C00 473 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms