RNA–Protein interactions for RNA: ENST00000333167.12

ACAA1-202, Transcript of acetyl-CoA acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACAA1, Length 1,785 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-202ENST00000333167 BRD4O60885 1362 aaPredicted RBP29.08■■■□□ 2.25
ACAA1-202ENST00000333167 PLEKHH1Q9ULM0 1364 aa29.08■■■□□ 2.25
ACAA1-202ENST00000333167 FAM9BQ8IZU0 186 aa29.07■■■□□ 2.24
ACAA1-202ENST00000333167 SLC12A5Q9H2X9 1139 aa29.07■■■□□ 2.24
ACAA1-202ENST00000333167 CABP2Q9NPB3 220 aa29.07■■■□□ 2.24
ACAA1-202ENST00000333167 KNDC1Q76NI1 1749 aa29.06■■■□□ 2.24
ACAA1-202ENST00000333167 WAPLQ7Z5K2 1190 aa29.06■■■□□ 2.24
ACAA1-202ENST00000333167 TECPR2O15040 1411 aa29.06■■■□□ 2.24
ACAA1-202ENST00000333167 NPC1L1Q9UHC9 1359 aa29.06■■■□□ 2.24
ACAA1-202ENST00000333167 TMC1Q8TDI8 760 aa29.04■■■□□ 2.24
ACAA1-202ENST00000333167 NLRP13Q86W25 1043 aa29.03■■■□□ 2.24
ACAA1-202ENST00000333167 CPS1P31327 1500 aa29.02■■■□□ 2.24
ACAA1-202ENST00000333167 SIRT1Q96EB6 747 aa29.02■■■□□ 2.24
ACAA1-202ENST00000333167 FAM135BQ49AJ0 1406 aa29.01■■■□□ 2.23
ACAA1-202ENST00000333167 PNISRQ8TF01 805 aaKnown RBP29.01■■■□□ 2.23
ACAA1-202ENST00000333167 ZNF142P52746 1687 aaPredicted RBP29■■■□□ 2.23
ACAA1-202ENST00000333167 HNRNPUQ00839 825 aaKnown RBP eCLIP29■■■□□ 2.23
ACAA1-202ENST00000333167 SRPK2P78362 688 aaKnown RBP28.99■■■□□ 2.23
ACAA1-202ENST00000333167 SLC26A8Q96RN1 970 aa28.98■■■□□ 2.23
ACAA1-202ENST00000333167 SCAF1Q9H7N4 1312 aaKnown RBP28.98■■■□□ 2.23
ACAA1-202ENST00000333167 CDK19Q9BWU1 502 aa28.98■■■□□ 2.23
ACAA1-202ENST00000333167 ATAD2Q6PL18 1390 aa28.97■■■□□ 2.23
ACAA1-202ENST00000333167 PTPRUQ92729 1446 aa28.97■■■□□ 2.23
ACAA1-202ENST00000333167 NSD3Q9BZ95 1437 aa28.97■■■□□ 2.23
ACAA1-202ENST00000333167 TBX22Q9Y458 520 aa28.96■■■□□ 2.23
ACAA1-202ENST00000333167 ROBO2Q9HCK4 1378 aa28.95■■■□□ 2.23
ACAA1-202ENST00000333167 ANKRD36BQ8N2N9 1353 aa28.95■■■□□ 2.22
ACAA1-202ENST00000333167 NINLQ9Y2I6 1382 aa28.95■■■□□ 2.22
ACAA1-202ENST00000333167 DIP2AQ14689 1571 aa28.93■■■□□ 2.22
ACAA1-202ENST00000333167 PPP2R1AP30153 589 aa28.93■■■□□ 2.22
ACAA1-202ENST00000333167 USP32Q8NFA0 1604 aa28.91■■■□□ 2.22
ACAA1-202ENST00000333167 CD163L1Q9NR16 1453 aa28.88■■■□□ 2.21
ACAA1-202ENST00000333167 GTF3C3Q9Y5Q9 886 aa28.88■■■□□ 2.21
ACAA1-202ENST00000333167 SETD1BQ9UPS6 1966 aaKnown RBP28.88■■■□□ 2.21
ACAA1-202ENST00000333167 A0A1W2PP64 1363 aa28.87■■■□□ 2.21
ACAA1-202ENST00000333167 WASLO00401 505 aaPredicted RBP28.87■■■□□ 2.21
ACAA1-202ENST00000333167 AMOTL2Q9Y2J4 779 aa28.84■■■□□ 2.21
ACAA1-202ENST00000333167 ANKLE2Q86XL3 938 aa28.83■■■□□ 2.21
ACAA1-202ENST00000333167 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.83■■■□□ 2.21
ACAA1-202ENST00000333167 CGNL1Q0VF96 1302 aa28.82■■■□□ 2.2
ACAA1-202ENST00000333167 ADGRB2O60241 1585 aa28.81■■■□□ 2.2
ACAA1-202ENST00000333167 CABP1Q9NZU7 370 aa28.81■■■□□ 2.2
ACAA1-202ENST00000333167 PTCH1Q13635 1447 aa28.81■■■□□ 2.2
ACAA1-202ENST00000333167 TERF2IPQ9NYB0 399 aa28.8■■■□□ 2.2
ACAA1-202ENST00000333167 XRN1Q8IZH2 1706 aaKnown RBP28.8■■■□□ 2.2
ACAA1-202ENST00000333167 ZBED9Q6R2W3 1325 aa28.8■■■□□ 2.2
ACAA1-202ENST00000333167 PIK3R4Q99570 1358 aa28.77■■■□□ 2.2
ACAA1-202ENST00000333167 NSD2O96028 1365 aa28.77■■■□□ 2.2
ACAA1-202ENST00000333167 ATP7BP35670 1465 aa28.77■■■□□ 2.2
ACAA1-202ENST00000333167 MORC1Q86VD1 984 aa28.76■■■□□ 2.19
ACAA1-202ENST00000333167 HDGFL2Q7Z4V5 671 aaPredicted RBP28.75■■■□□ 2.19
ACAA1-202ENST00000333167 NUDT16Q96DE0 195 aaKnown RBP28.75■■■□□ 2.19
ACAA1-202ENST00000333167 PRR36Q9H6K5 1346 aa28.73■■■□□ 2.19
ACAA1-202ENST00000333167 PPIP5K1Q6PFW1 1433 aa28.73■■■□□ 2.19
ACAA1-202ENST00000333167 INSRP06213 1382 aa28.72■■■□□ 2.19
ACAA1-202ENST00000333167 NCKAP5LQ9HCH0 1330 aa28.71■■■□□ 2.19
ACAA1-202ENST00000333167 KCNA6P17658 529 aa28.7■■■□□ 2.19
ACAA1-202ENST00000333167 CPSF1Q10570 1443 aaKnown RBP28.7■■■□□ 2.19
ACAA1-202ENST00000333167 NPHP4O75161 1426 aaPredicted RBP28.7■■■□□ 2.18
ACAA1-202ENST00000333167 BLMP54132 1417 aaPredicted RBP28.69■■■□□ 2.18
ACAA1-202ENST00000333167 CCDC61Q9Y6R9 512 aa28.69■■■□□ 2.18
ACAA1-202ENST00000333167 CDC42BPGQ6DT37 1551 aa28.68■■■□□ 2.18
ACAA1-202ENST00000333167 FYB1O15117 783 aa28.67■■■□□ 2.18
ACAA1-202ENST00000333167 TNNT2P45379 298 aaPredicted RBP28.66■■■□□ 2.18
ACAA1-202ENST00000333167 SENP3-EIF4A1A0A087X0R7 540 aa28.65■■■□□ 2.18
ACAA1-202ENST00000333167 GGNBP2Q9H3C7 697 aa28.65■■■□□ 2.18
ACAA1-202ENST00000333167 ADAMTS8Q9UP79 889 aa28.65■■■□□ 2.18
ACAA1-202ENST00000333167 CHD2O14647 1828 aaKnown RBP28.64■■■□□ 2.18
ACAA1-202ENST00000333167 POLR3AO14802 1390 aaPredicted RBP28.64■■■□□ 2.18
ACAA1-202ENST00000333167 TOPAZ1Q8N9V7 1692 aa28.64■■■□□ 2.18
ACAA1-202ENST00000333167 ANKRD26Q9UPS8 1709 aa28.63■■■□□ 2.17
ACAA1-202ENST00000333167 WDR43Q15061 677 aaKnown RBP eCLIP28.61■■■□□ 2.17
ACAA1-202ENST00000333167 KIF20BQ96Q89 1820 aa28.61■■■□□ 2.17
ACAA1-202ENST00000333167 EDC4Q6P2E9 1401 aaKnown RBP28.61■■■□□ 2.17
ACAA1-202ENST00000333167 MON2Q7Z3U7 1717 aa28.59■■■□□ 2.17
ACAA1-202ENST00000333167 AKAP12Q02952 1782 aa28.59■■■□□ 2.17
ACAA1-202ENST00000333167 NUTM2FA1L443 756 aa28.57■■■□□ 2.16
ACAA1-202ENST00000333167 MTHFSP49914 203 aa28.57■■■□□ 2.16
ACAA1-202ENST00000333167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.57■■■□□ 2.16
ACAA1-202ENST00000333167 NKTRP30414 1462 aaKnown RBP28.57■■■□□ 2.16
ACAA1-202ENST00000333167 KDM4FA0A1W2PPD8 638 aa28.57■■■□□ 2.16
ACAA1-202ENST00000333167 PLEKHG3A1L390 1219 aa28.57■■■□□ 2.16
ACAA1-202ENST00000333167 ITSN1Q15811 1721 aa28.56■■■□□ 2.16
ACAA1-202ENST00000333167 SHPRHQ149N8 1683 aa28.54■■■□□ 2.16
ACAA1-202ENST00000333167 ZNF692Q9BU19 519 aaPredicted RBP28.53■■■□□ 2.16
ACAA1-202ENST00000333167 SMG6Q86US8 1419 aaKnown RBP28.52■■■□□ 2.16
ACAA1-202ENST00000333167 ACEP12821 1306 aa28.51■■■□□ 2.15
ACAA1-202ENST00000333167 NME9Q86XW9 330 aa28.51■■■□□ 2.15
ACAA1-202ENST00000333167 NALCNQ8IZF0 1738 aa28.51■■■□□ 2.15
ACAA1-202ENST00000333167 FMN2Q9NZ56 1722 aa28.5■■■□□ 2.15
ACAA1-202ENST00000333167 NWD1Q149M9 1564 aa28.5■■■□□ 2.15
ACAA1-202ENST00000333167 ANKARQ7Z5J8 1434 aa28.5■■■□□ 2.15
ACAA1-202ENST00000333167 NRKQ7Z2Y5 1582 aa28.49■■■□□ 2.15
ACAA1-202ENST00000333167 CFAP53Q96M91 514 aa28.48■■■□□ 2.15
ACAA1-202ENST00000333167 SALL2Q9Y467 1007 aaPredicted RBP28.48■■■□□ 2.15
ACAA1-202ENST00000333167 ZRANB1Q9UGI0 708 aa28.47■■■□□ 2.15
ACAA1-202ENST00000333167 RBM33Q96EV2 1170 aaKnown RBP28.46■■■□□ 2.15
ACAA1-202ENST00000333167 USP6P35125 1406 aa28.46■■■□□ 2.15
ACAA1-202ENST00000333167 RGPD8O14715 1765 aaPredicted RBP28.45■■■□□ 2.15
ACAA1-202ENST00000333167 COL3A1P02461 1466 aaPredicted RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms